BLASTX nr result

ID: Coptis23_contig00011999 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00011999
         (656 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273654.2| PREDICTED: uncharacterized protein LOC100254...   149   5e-34
ref|XP_002511728.1| conserved hypothetical protein [Ricinus comm...   136   3e-30
ref|XP_002320062.1| predicted protein [Populus trichocarpa] gi|2...   135   9e-30
ref|XP_003516467.1| PREDICTED: uncharacterized protein LOC100790...   129   5e-28
ref|XP_004134347.1| PREDICTED: uncharacterized protein LOC101217...   125   9e-27

>ref|XP_002273654.2| PREDICTED: uncharacterized protein LOC100254100 [Vitis vinifera]
          Length = 633

 Score =  149 bits (376), Expect = 5e-34
 Identities = 68/100 (68%), Positives = 79/100 (79%)
 Frame = -2

Query: 649 WDRMRTECRSRKILMSENLKSDKWLKDPCDEFDEKSILDGEDSKLIKPLRHDGPVVTDAA 470
           WD++RT+CRS K LMSE  K +KWLK  C EFDEKSILD ED+KL KP+RHD  +VTD  
Sbjct: 536 WDQIRTDCRSEKDLMSETCKPEKWLK--CSEFDEKSILDCEDTKLTKPIRHDETIVTDVG 593

Query: 469 FIGIQVEGFYPDNSKWYDSPCSLDPGADCGDSEFRPGEIV 350
            +GIQV+ FY +NSKWYDSPC LDPGADCGD+ FR G IV
Sbjct: 594 LVGIQVDSFYSENSKWYDSPCGLDPGADCGDNGFRNGGIV 633


>ref|XP_002511728.1| conserved hypothetical protein [Ricinus communis]
           gi|223548908|gb|EEF50397.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 630

 Score =  136 bits (343), Expect = 3e-30
 Identities = 68/102 (66%), Positives = 75/102 (73%)
 Frame = -2

Query: 655 VHWDRMRTECRSRKILMSENLKSDKWLKDPCDEFDEKSILDGEDSKLIKPLRHDGPVVTD 476
           V WD+MRTECRS K LMSE  K +KWLK  C +FD KSILD ED+KL KPLRHD  +VTD
Sbjct: 533 VPWDQMRTECRSDKDLMSEPCKPEKWLK--CSDFDAKSILDCEDTKLTKPLRHDEAIVTD 590

Query: 475 AAFIGIQVEGFYPDNSKWYDSPCSLDPGADCGDSEFRPGEIV 350
              I  QV+ FY +N KWYDSPC LD  ADCGDS FR GEIV
Sbjct: 591 VGLI--QVDSFYQENPKWYDSPCGLDSSADCGDSGFRHGEIV 630


>ref|XP_002320062.1| predicted protein [Populus trichocarpa] gi|222860835|gb|EEE98377.1|
           predicted protein [Populus trichocarpa]
          Length = 638

 Score =  135 bits (339), Expect = 9e-30
 Identities = 66/102 (64%), Positives = 76/102 (74%)
 Frame = -2

Query: 655 VHWDRMRTECRSRKILMSENLKSDKWLKDPCDEFDEKSILDGEDSKLIKPLRHDGPVVTD 476
           V WD+MR ECRS K L+SE  K +KWLK  C +FDEKSILD ED+KL KP+RHD  +VTD
Sbjct: 541 VPWDQMRAECRSEKDLLSEPSKPEKWLK--CSDFDEKSILDCEDTKLTKPMRHDEGIVTD 598

Query: 475 AAFIGIQVEGFYPDNSKWYDSPCSLDPGADCGDSEFRPGEIV 350
              I  QV+ FY +N+KWYDSPC LD  ADC DSEFR GEIV
Sbjct: 599 VGLI--QVDSFYHENAKWYDSPCGLDTSADCEDSEFRHGEIV 638


>ref|XP_003516467.1| PREDICTED: uncharacterized protein LOC100790847 [Glycine max]
          Length = 625

 Score =  129 bits (324), Expect = 5e-28
 Identities = 68/108 (62%), Positives = 81/108 (75%), Gaps = 6/108 (5%)
 Frame = -2

Query: 655 VHW-DRMRTECRSRKI-LMSENLKSDKWLKDPCDEFDEKSILDGEDSKLIKP---LRHDG 491
           V W D+M TECRS+K  LMS+  K +KWLK  C +FDEKSILD EDSKL KP   +RHD 
Sbjct: 520 VSWGDQMTTECRSQKDDLMSDTCKPEKWLK--CSDFDEKSILDCEDSKLTKPVRLIRHDE 577

Query: 490 PVVTDAAFIG-IQVEGFYPDNSKWYDSPCSLDPGADCGDSEFRPGEIV 350
            +V+D   +G +QV+ FYPDN KWYDSPC+LD GADCGDS FR GEI+
Sbjct: 578 GIVSDVVGLGCMQVDSFYPDNPKWYDSPCALDTGADCGDSAFRHGEIL 625


>ref|XP_004134347.1| PREDICTED: uncharacterized protein LOC101217172 [Cucumis sativus]
           gi|449480338|ref|XP_004155865.1| PREDICTED:
           uncharacterized protein LOC101228679 [Cucumis sativus]
          Length = 640

 Score =  125 bits (313), Expect = 9e-27
 Identities = 57/103 (55%), Positives = 74/103 (71%), Gaps = 1/103 (0%)
 Frame = -2

Query: 655 VHW-DRMRTECRSRKILMSENLKSDKWLKDPCDEFDEKSILDGEDSKLIKPLRHDGPVVT 479
           V W D MR +CR++K L  E  K ++W K  C +F++KS+L  ED+KLIKP+RHD  +V 
Sbjct: 540 VPWEDHMRADCRNQKELTREPCKPERWFK--CTDFNDKSLLGCEDTKLIKPMRHDESMVA 597

Query: 478 DAAFIGIQVEGFYPDNSKWYDSPCSLDPGADCGDSEFRPGEIV 350
           D   +GI V+GFYP+N KWYDSPC LD  ADCGD+ F+ GEIV
Sbjct: 598 DVGLVGIHVDGFYPENPKWYDSPCDLDSNADCGDTGFKHGEIV 640


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