BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00011998
         (490 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520729.1| conserved hypothetical protein [Ricinus comm...    89   3e-16
ref|XP_004146979.1| PREDICTED: F-box protein SKIP17-like [Cucumi...    87   2e-15
ref|XP_003554256.1| PREDICTED: F-box protein SKIP17-like [Glycin...    86   2e-15
ref|NP_001235043.1| uncharacterized protein LOC100306182 [Glycin...    86   2e-15
ref|XP_002272905.2| PREDICTED: F-box protein SKIP17 [Vitis vinif...    81   1e-13

>ref|XP_002520729.1| conserved hypothetical protein [Ricinus communis]
           gi|223540114|gb|EEF41691.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 515

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 44/67 (65%), Positives = 57/67 (85%), Gaps = 1/67 (1%)
 Frame = -2

Query: 489 EQIMNSELNSDTSLPSEISSHSSDVSLFMSSSESSYNSDQGSGNEDVHHGGF-VYDESSD 313
           EQ+++SELNS+ SLPS++SSH+SD SLFMS+SESSYNSDQ SGNE+     + VY+ESSD
Sbjct: 449 EQMIDSELNSEVSLPSQLSSHTSDSSLFMSTSESSYNSDQSSGNEESRDSAYIVYEESSD 508

Query: 312 EVEFLSL 292
           EV+FL +
Sbjct: 509 EVDFLGV 515


>ref|XP_004146979.1| PREDICTED: F-box protein SKIP17-like [Cucumis sativus]
           gi|449491486|ref|XP_004158913.1| PREDICTED: F-box
           protein SKIP17-like [Cucumis sativus]
          Length = 472

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 44/67 (65%), Positives = 59/67 (88%), Gaps = 1/67 (1%)
 Frame = -2

Query: 489 EQIMNSELNSDTSLPSEISSHSSDVSLFMSSSESSYNSDQGSGNEDVHHGGFV-YDESSD 313
           EQ++ SE+NSDTSLP+++SS +SD S+F+SSSESSYNSDQGSGNED    G+V ++ESSD
Sbjct: 407 EQMLESEVNSDTSLPTQLSSDTSD-SMFISSSESSYNSDQGSGNEDGRDAGYVIFEESSD 465

Query: 312 EVEFLSL 292
           EV++L+L
Sbjct: 466 EVDYLAL 472


>ref|XP_003554256.1| PREDICTED: F-box protein SKIP17-like [Glycine max]
          Length = 480

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 41/66 (62%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
 Frame = -2

Query: 486 QIMNSELNSDTSLPSEISSHSSDVSLFMSSSESSYNSDQGSGNEDVHHGGFV-YDESSDE 310
           +  ++++NS+ SLPS++SSH+SD S+FMS+SESSYNSDQGSGNED     +V Y+ESSDE
Sbjct: 415 ETFDADMNSEISLPSQLSSHTSDGSIFMSTSESSYNSDQGSGNEDGQDANYVIYEESSDE 474

Query: 309 VEFLSL 292
           ++FLSL
Sbjct: 475 IDFLSL 480


>ref|NP_001235043.1| uncharacterized protein LOC100306182 [Glycine max]
           gi|255627795|gb|ACU14242.1| unknown [Glycine max]
          Length = 142

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 41/66 (62%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
 Frame = -2

Query: 486 QIMNSELNSDTSLPSEISSHSSDVSLFMSSSESSYNSDQGSGNEDVHHGGFV-YDESSDE 310
           +  ++++NS+ SLPS++SSH+SD S+FMS+SESSYNSDQGSGNED     +V Y+ESSDE
Sbjct: 77  ETFDADMNSEISLPSQLSSHTSDGSIFMSTSESSYNSDQGSGNEDGQDANYVIYEESSDE 136

Query: 309 VEFLSL 292
           ++FLSL
Sbjct: 137 IDFLSL 142


>ref|XP_002272905.2| PREDICTED: F-box protein SKIP17 [Vitis vinifera]
          Length = 486

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 42/60 (70%), Positives = 50/60 (83%), Gaps = 1/60 (1%)
 Frame = -2

Query: 468 LNSDTSLPSEISSHSSDVSLFMSSSESSYNSDQGSGNEDVHHGGFV-YDESSDEVEFLSL 292
           LNSD SL S++SSHSSD S+ MSSSESSYNSDQGSGNED    G+V Y+ESSDEV+ L++
Sbjct: 427 LNSDASLSSQLSSHSSDSSVSMSSSESSYNSDQGSGNEDGRETGYVIYEESSDEVDILAV 486