BLASTX nr result

ID: Coptis23_contig00011997 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00011997
         (1447 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271213.1| PREDICTED: TBC1 domain family member 13 [Vit...   637   e-180
ref|XP_002518065.1| conserved hypothetical protein [Ricinus comm...   632   e-179
ref|XP_004138936.1| PREDICTED: TBC1 domain family member 13-like...   615   e-174
ref|XP_002300164.1| predicted protein [Populus trichocarpa] gi|2...   607   e-171
ref|XP_003532745.1| PREDICTED: TBC1 domain family member 13-like...   602   e-169

>ref|XP_002271213.1| PREDICTED: TBC1 domain family member 13 [Vitis vinifera]
            gi|298205157|emb|CBI17216.3| unnamed protein product
            [Vitis vinifera]
          Length = 437

 Score =  637 bits (1642), Expect = e-180
 Identities = 312/360 (86%), Positives = 339/360 (94%)
 Frame = -2

Query: 1311 SPEDISRQSQLLAELSRKVINLLELRRLASQGIPDGAGIRSTVWKLLLGYLPTDRGHWVA 1132
            S EDISRQ+QLLAELS+KVIN+ ELRRLASQGIPDGAGIRSTVWKLLLGYLPTDRGHW +
Sbjct: 79   SAEDISRQAQLLAELSKKVINVRELRRLASQGIPDGAGIRSTVWKLLLGYLPTDRGHWSS 138

Query: 1131 ELARKRSQYKHFTDELLVNPSEITRKLETSTRLETDESKLEDKGLLPRSEIPQGEHPLSL 952
            ELA+KRSQYKHF +ELL+NPSEITR+L  ST  + DE K E  G+L RSEI  GEHPLSL
Sbjct: 139  ELAKKRSQYKHFKEELLMNPSEITRRLGKSTSPD-DEPKSEGSGMLSRSEITHGEHPLSL 197

Query: 951  GKTSIWNQFFQDTEIIEQIDRDVKRTHPDLHFFSGDSSFAKSNQEALRRILIIFAKLNPG 772
            GKTSIWNQFFQDTEIIEQIDRDVKRTHPD++FFSGD+  AK+NQ+ALR ILI+FAKLNPG
Sbjct: 198  GKTSIWNQFFQDTEIIEQIDRDVKRTHPDMNFFSGDTPSAKTNQDALRNILIVFAKLNPG 257

Query: 771  IRYVQGMNEVLAPLFYVFRNDPDEENAASAEADTFFCFVELLSGFRDHFCQQLDNSVVGI 592
            IRYVQGMNE+LAPLFYVF+NDPDEENAASAEADTFFCFVELLSGFRDHFCQQLDNSVVGI
Sbjct: 258  IRYVQGMNEILAPLFYVFKNDPDEENAASAEADTFFCFVELLSGFRDHFCQQLDNSVVGI 317

Query: 591  RSTITKMSQLLKEHDEELWRHLEVTTKVNPQFYAFRWITLLLTQEFNFADSLHIWDTLLS 412
            RSTIT++SQLLKEHD ELWRHLE+TTKVNPQFYAFRWITLLLTQEFNFADSLHIWDTLLS
Sbjct: 318  RSTITRLSQLLKEHDGELWRHLEITTKVNPQFYAFRWITLLLTQEFNFADSLHIWDTLLS 377

Query: 411  DPEGPQETLLRVCCAMLVLIRRRLLAGDFTSNLKLLQHYPSTNISHLLYVADKLRARSVG 232
            DPEGPQETLLR+CCAML+L+RRRLLAGDFTSNLKLLQ+YPSTNISHLLYVA+KLRA+S G
Sbjct: 378  DPEGPQETLLRICCAMLILVRRRLLAGDFTSNLKLLQNYPSTNISHLLYVANKLRAQSTG 437


>ref|XP_002518065.1| conserved hypothetical protein [Ricinus communis]
            gi|223542661|gb|EEF44198.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 468

 Score =  632 bits (1631), Expect = e-179
 Identities = 308/357 (86%), Positives = 333/357 (93%)
 Frame = -2

Query: 1311 SPEDISRQSQLLAELSRKVINLLELRRLASQGIPDGAGIRSTVWKLLLGYLPTDRGHWVA 1132
            S EDISRQ+QLL ELSRKV+N+ ELRR+ASQGIPDGAGIRSTVWKLLLGYLPTDR  W +
Sbjct: 109  SAEDISRQAQLLTELSRKVVNIKELRRIASQGIPDGAGIRSTVWKLLLGYLPTDRSLWSS 168

Query: 1131 ELARKRSQYKHFTDELLVNPSEITRKLETSTRLETDESKLEDKGLLPRSEIPQGEHPLSL 952
            ELA+KRSQY+HF +ELL+NPSEI R+LE ST  E DE K E++G+L RSEI  GEHPLSL
Sbjct: 169  ELAKKRSQYRHFKEELLMNPSEIARRLEKSTGCENDEPKCENRGVLSRSEITHGEHPLSL 228

Query: 951  GKTSIWNQFFQDTEIIEQIDRDVKRTHPDLHFFSGDSSFAKSNQEALRRILIIFAKLNPG 772
            GKTSIWNQFFQDTEIIEQIDRDVKRTHPD+HFF GDSSFAKSNQ+ALR ILI+FAKLNPG
Sbjct: 229  GKTSIWNQFFQDTEIIEQIDRDVKRTHPDMHFFCGDSSFAKSNQDALRNILIVFAKLNPG 288

Query: 771  IRYVQGMNEVLAPLFYVFRNDPDEENAASAEADTFFCFVELLSGFRDHFCQQLDNSVVGI 592
            IRYVQGMNE+LAPLFYVFRNDPDEE AA AEADTFFCFVELLSGFRD+FCQQLDNSVVGI
Sbjct: 289  IRYVQGMNEILAPLFYVFRNDPDEEMAACAEADTFFCFVELLSGFRDNFCQQLDNSVVGI 348

Query: 591  RSTITKMSQLLKEHDEELWRHLEVTTKVNPQFYAFRWITLLLTQEFNFADSLHIWDTLLS 412
            RSTIT++SQLLKEHDEELWRHLEVTTKVNPQFYAFRWITLLLTQEFNFADSLHIWDTLLS
Sbjct: 349  RSTITRLSQLLKEHDEELWRHLEVTTKVNPQFYAFRWITLLLTQEFNFADSLHIWDTLLS 408

Query: 411  DPEGPQETLLRVCCAMLVLIRRRLLAGDFTSNLKLLQHYPSTNISHLLYVADKLRAR 241
            DPEGPQETLLR+CC ML+LIRRRLLAGDFTSNLKLLQ+YP TNISHLLYVA+KLR +
Sbjct: 409  DPEGPQETLLRICCTMLILIRRRLLAGDFTSNLKLLQNYPPTNISHLLYVANKLRVQ 465


>ref|XP_004138936.1| PREDICTED: TBC1 domain family member 13-like [Cucumis sativus]
            gi|449505611|ref|XP_004162521.1| PREDICTED: TBC1 domain
            family member 13-like [Cucumis sativus]
          Length = 446

 Score =  615 bits (1586), Expect = e-174
 Identities = 299/355 (84%), Positives = 329/355 (92%)
 Frame = -2

Query: 1311 SPEDISRQSQLLAELSRKVINLLELRRLASQGIPDGAGIRSTVWKLLLGYLPTDRGHWVA 1132
            S ED+SRQ+QLL ELS+K+INL ELR++ASQGIPDG GIRSTVWKLLLGYLP DRG W +
Sbjct: 90   SAEDVSRQAQLLVELSKKIINLRELRKIASQGIPDGPGIRSTVWKLLLGYLPPDRGLWTS 149

Query: 1131 ELARKRSQYKHFTDELLVNPSEITRKLETSTRLETDESKLEDKGLLPRSEIPQGEHPLSL 952
            ELA+KRSQYKHF DELL+NPSEI+R+ E +   E DE+   +KG L RSEI Q EHPLSL
Sbjct: 150  ELAKKRSQYKHFKDELLMNPSEISRRSEKAKSYEHDET---NKGPLSRSEISQEEHPLSL 206

Query: 951  GKTSIWNQFFQDTEIIEQIDRDVKRTHPDLHFFSGDSSFAKSNQEALRRILIIFAKLNPG 772
            GKTSIWNQ+FQD+EIIEQIDRDVKRTHPD+HFFSGDSS AKSNQEALR ILI+FAKLNPG
Sbjct: 207  GKTSIWNQYFQDSEIIEQIDRDVKRTHPDMHFFSGDSSLAKSNQEALRNILIVFAKLNPG 266

Query: 771  IRYVQGMNEVLAPLFYVFRNDPDEENAASAEADTFFCFVELLSGFRDHFCQQLDNSVVGI 592
            IRYVQGMNE+LAPLFYVFR+DPDE+NAASAEADTFFCFVELLSGFRDHFCQQLDNSVVGI
Sbjct: 267  IRYVQGMNEILAPLFYVFRSDPDEDNAASAEADTFFCFVELLSGFRDHFCQQLDNSVVGI 326

Query: 591  RSTITKMSQLLKEHDEELWRHLEVTTKVNPQFYAFRWITLLLTQEFNFADSLHIWDTLLS 412
            R+TITK+SQLLKEHDEELWRHLE+TTKVNPQFYAFRWITLLLTQEFNFADSLHIWDT+LS
Sbjct: 327  RATITKLSQLLKEHDEELWRHLEITTKVNPQFYAFRWITLLLTQEFNFADSLHIWDTILS 386

Query: 411  DPEGPQETLLRVCCAMLVLIRRRLLAGDFTSNLKLLQHYPSTNISHLLYVADKLR 247
            DPEGP ETLLR+CC+ML+LIRRRLLAGDFT+NLKLLQHYP  NISHLLYVA+KLR
Sbjct: 387  DPEGPLETLLRICCSMLILIRRRLLAGDFTANLKLLQHYPPANISHLLYVANKLR 441


>ref|XP_002300164.1| predicted protein [Populus trichocarpa] gi|222847422|gb|EEE84969.1|
            predicted protein [Populus trichocarpa]
          Length = 356

 Score =  607 bits (1566), Expect = e-171
 Identities = 296/353 (83%), Positives = 324/353 (91%)
 Frame = -2

Query: 1305 EDISRQSQLLAELSRKVINLLELRRLASQGIPDGAGIRSTVWKLLLGYLPTDRGHWVAEL 1126
            EDIS+Q+ LL ELS+KVIN+ ELRR+ASQGIPDGAGIRSTVWKLLLGYL  DR  W +EL
Sbjct: 4    EDISKQALLLTELSKKVINMGELRRIASQGIPDGAGIRSTVWKLLLGYLAPDRSLWSSEL 63

Query: 1125 ARKRSQYKHFTDELLVNPSEITRKLETSTRLETDESKLEDKGLLPRSEIPQGEHPLSLGK 946
            A+KRSQYKHF ++LL+NPSEI R+LE +T L  D  K E + +L RSEI  GEHPLSLGK
Sbjct: 64   AKKRSQYKHFKEDLLMNPSEIARRLEKTTVLNNDNGKSESRCVLSRSEITHGEHPLSLGK 123

Query: 945  TSIWNQFFQDTEIIEQIDRDVKRTHPDLHFFSGDSSFAKSNQEALRRILIIFAKLNPGIR 766
            +S+WNQFFQD+EIIEQIDRDVKRTHPDLHFFSGDSS AKSNQEALR IL +FAKLNPGIR
Sbjct: 124  SSVWNQFFQDSEIIEQIDRDVKRTHPDLHFFSGDSSLAKSNQEALRNILTVFAKLNPGIR 183

Query: 765  YVQGMNEVLAPLFYVFRNDPDEENAASAEADTFFCFVELLSGFRDHFCQQLDNSVVGIRS 586
            YVQGMNE+LAPLFY+F+NDPDEE AA AEADTFFCFVELLSGFRDHFCQQLDNSVVGIRS
Sbjct: 184  YVQGMNEILAPLFYIFKNDPDEEMAACAEADTFFCFVELLSGFRDHFCQQLDNSVVGIRS 243

Query: 585  TITKMSQLLKEHDEELWRHLEVTTKVNPQFYAFRWITLLLTQEFNFADSLHIWDTLLSDP 406
            TIT++SQLLKEHDEELWRHLE+TTKVNPQFYAFRWITLLLTQEFNFADSLHIWDTLLSDP
Sbjct: 244  TITRLSQLLKEHDEELWRHLEITTKVNPQFYAFRWITLLLTQEFNFADSLHIWDTLLSDP 303

Query: 405  EGPQETLLRVCCAMLVLIRRRLLAGDFTSNLKLLQHYPSTNISHLLYVADKLR 247
            EGPQETLLRVCCAML+LIRRRLLAGDFTS LKLLQ+YP TNISH+LYVA+KLR
Sbjct: 304  EGPQETLLRVCCAMLILIRRRLLAGDFTSILKLLQNYPPTNISHMLYVANKLR 356


>ref|XP_003532745.1| PREDICTED: TBC1 domain family member 13-like [Glycine max]
          Length = 449

 Score =  602 bits (1551), Expect = e-169
 Identities = 294/365 (80%), Positives = 329/365 (90%), Gaps = 1/365 (0%)
 Frame = -2

Query: 1326 HGPSF-SPEDISRQSQLLAELSRKVINLLELRRLASQGIPDGAGIRSTVWKLLLGYLPTD 1150
            HG  F S  D+SRQ+QLLAELS+KV+++ ELR LA QGIPD AGIRSTVWKLLLGYLP D
Sbjct: 86   HGDGFRSAHDVSRQAQLLAELSKKVVDMSELRSLACQGIPDAAGIRSTVWKLLLGYLPPD 145

Query: 1149 RGHWVAELARKRSQYKHFTDELLVNPSEITRKLETSTRLETDESKLEDKGLLPRSEIPQG 970
            RG W AELA+KR QYK F +E+ +NPSEITRK+  S   +TD++    + LL RSEI  G
Sbjct: 146  RGLWSAELAKKRFQYKQFKEEIFMNPSEITRKMYNSANCDTDDASCA-RALLSRSEITHG 204

Query: 969  EHPLSLGKTSIWNQFFQDTEIIEQIDRDVKRTHPDLHFFSGDSSFAKSNQEALRRILIIF 790
            EHPLSLGKTS+WNQFFQDTEII+QIDRDVKRTHPD+HFFSGDS FAKSNQEAL+ ILIIF
Sbjct: 205  EHPLSLGKTSVWNQFFQDTEIIDQIDRDVKRTHPDMHFFSGDSQFAKSNQEALKNILIIF 264

Query: 789  AKLNPGIRYVQGMNEVLAPLFYVFRNDPDEENAASAEADTFFCFVELLSGFRDHFCQQLD 610
            AKLNPG+RYVQGMNE+LAPLFYVF+NDPDEENAA AEAD FFCFVELLSGFRD+F QQLD
Sbjct: 265  AKLNPGVRYVQGMNEILAPLFYVFKNDPDEENAAFAEADAFFCFVELLSGFRDNFVQQLD 324

Query: 609  NSVVGIRSTITKMSQLLKEHDEELWRHLEVTTKVNPQFYAFRWITLLLTQEFNFADSLHI 430
            NSVVGIR+TIT++SQLL+EHDEELWRHLEVT+KVNPQFYAFRWITLLLTQEFNFADSLHI
Sbjct: 325  NSVVGIRATITRLSQLLREHDEELWRHLEVTSKVNPQFYAFRWITLLLTQEFNFADSLHI 384

Query: 429  WDTLLSDPEGPQETLLRVCCAMLVLIRRRLLAGDFTSNLKLLQHYPSTNISHLLYVADKL 250
            WDTLLSDP+GPQETLLRVCCAMLVL+R+RLLAGDFTSNLKLLQ+YP+TNISHLLYVA+K 
Sbjct: 385  WDTLLSDPDGPQETLLRVCCAMLVLVRKRLLAGDFTSNLKLLQNYPTTNISHLLYVANKF 444

Query: 249  RARSV 235
            R +SV
Sbjct: 445  RVQSV 449


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