BLASTX nr result

ID: Coptis23_contig00011996 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00011996
         (1048 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004142815.1| PREDICTED: uncharacterized protein LOC101208...   169   8e-40
gb|AFK39013.1| unknown [Lotus japonicus]                              169   8e-40
ref|XP_002877784.1| hypothetical protein ARALYDRAFT_485453 [Arab...   169   8e-40
ref|NP_001236655.1| uncharacterized protein LOC100527226 [Glycin...   168   2e-39
ref|NP_566942.1| uncharacterized protein [Arabidopsis thaliana] ...   167   3e-39

>ref|XP_004142815.1| PREDICTED: uncharacterized protein LOC101208398 [Cucumis sativus]
           gi|449504261|ref|XP_004162297.1| PREDICTED:
           uncharacterized protein LOC101227898 [Cucumis sativus]
          Length = 182

 Score =  169 bits (429), Expect = 8e-40
 Identities = 103/182 (56%), Positives = 122/182 (67%), Gaps = 5/182 (2%)
 Frame = -2

Query: 903 GWGALRNIIVRPLTRSIFTH---SPIRFPAKISNGPFVPPASEFRSWLDSIRQPLPFS-- 739
           G G LR+II RPLTR   +H   SP  FP+  +   F  P     S   S+R   P+   
Sbjct: 2   GLGILRSII-RPLTRISRSHPFSSPTAFPSAFT---FSKPGFHLPS-TGSVRTGDPWFPI 56

Query: 738 YKGLHSLTETRYPKRRPGFRSRKKRTTIKPTGPYALVQHTPEEPILANKPNEGSVKNRNA 559
               HSLTETR PKRRP ++ R+KR +++P GPYA V +TP +PIL N+PNEGSVK R  
Sbjct: 57  ANHFHSLTETRLPKRRPSYKPRRKRASLRPPGPYAWVPYTPGQPILPNQPNEGSVKRR-- 114

Query: 558 NEKKRIAQRKAFIKSEAKKRKVLVQEAKKKKRNLRIERKMAAVARDRAWAQRLAELQKLE 379
           NEKKRI   +AFI SE KKRK  VQEA KKK  +R+ERKMAAVAR+RAWA RLAELQKLE
Sbjct: 115 NEKKRIRLHRAFIMSERKKRKAQVQEANKKKLVMRVERKMAAVARERAWAVRLAELQKLE 174

Query: 378 AE 373
            E
Sbjct: 175 EE 176


>gb|AFK39013.1| unknown [Lotus japonicus]
          Length = 175

 Score =  169 bits (429), Expect = 8e-40
 Identities = 97/179 (54%), Positives = 121/179 (67%)
 Frame = -2

Query: 897 GALRNIIVRPLTRSIFTHSPIRFPAKISNGPFVPPASEFRSWLDSIRQPLPFSYKGLHSL 718
           GALRNI VRPL+ S    SP   P++I   P      E    L     PL   +   HSL
Sbjct: 5   GALRNI-VRPLSLS----SPRTLPSQICTNPTTTALLESPCKLPQWLFPLRNHF---HSL 56

Query: 717 TETRYPKRRPGFRSRKKRTTIKPTGPYALVQHTPEEPILANKPNEGSVKNRNANEKKRIA 538
           T+TR+PKRRP  + R+KR +++P GPYA VQ+TP EPIL NKPNEGSVK R  NEKKR+ 
Sbjct: 57  TDTRFPKRRPSDKPRRKRASLRPPGPYAWVQYTPGEPILPNKPNEGSVKRR--NEKKRVR 114

Query: 537 QRKAFIKSEAKKRKVLVQEAKKKKRNLRIERKMAAVARDRAWAQRLAELQKLEAETANT 361
           Q +AF+ +E KKRK  +QEA +KK   ++ERKMAAVAR+R WA+RLAELQ+LE E  N+
Sbjct: 115 QHRAFVLAERKKRKAQLQEANRKKSIKKVERKMAAVAREREWAERLAELQRLEKEKKNS 173


>ref|XP_002877784.1| hypothetical protein ARALYDRAFT_485453 [Arabidopsis lyrata subsp.
           lyrata] gi|297323622|gb|EFH54043.1| hypothetical protein
           ARALYDRAFT_485453 [Arabidopsis lyrata subsp. lyrata]
          Length = 188

 Score =  169 bits (429), Expect = 8e-40
 Identities = 102/190 (53%), Positives = 129/190 (67%), Gaps = 9/190 (4%)
 Frame = -2

Query: 903 GWGALRNIIVRPLTRSIFT-----HSPIRFPAKISNGPFVPP--ASEFRSWLDSIRQPLP 745
           G+GA+R+I  RPL+R++ +     +S   FPAKI   P   P   S F   +  +R P  
Sbjct: 2   GFGAIRSIF-RPLSRTLVSRAVANYSSAPFPAKI---PAAKPELCSFFGGSMTHLRLPWI 57

Query: 744 FSYKGLHSL--TETRYPKRRPGFRSRKKRTTIKPTGPYALVQHTPEEPILANKPNEGSVK 571
                 HSL  T+TR PKRRP    ++KR+ +KP GPYA VQ+TP +PI +N PNEGSVK
Sbjct: 58  PMANHFHSLSLTDTRLPKRRPMTHPKRKRSKLKPPGPYAYVQYTPGQPISSNNPNEGSVK 117

Query: 570 NRNANEKKRIAQRKAFIKSEAKKRKVLVQEAKKKKRNLRIERKMAAVARDRAWAQRLAEL 391
            RNA  KKRIAQR+AFI SE KKR+ LVQEAK+KKR  ++ERKMAAVARDRAWA+RL EL
Sbjct: 118 RRNA--KKRIAQRRAFILSEKKKRQALVQEAKRKKRIKQVERKMAAVARDRAWAERLTEL 175

Query: 390 QKLEAETANT 361
           ++ E E  N+
Sbjct: 176 KQFEEEKKNS 185


>ref|NP_001236655.1| uncharacterized protein LOC100527226 [Glycine max]
           gi|255631824|gb|ACU16279.1| unknown [Glycine max]
          Length = 178

 Score =  168 bits (425), Expect = 2e-39
 Identities = 95/178 (53%), Positives = 119/178 (66%), Gaps = 3/178 (1%)
 Frame = -2

Query: 897 GALRNIIVRPLTRSIFTHSPIRFPAKISNGPFVPP---ASEFRSWLDSIRQPLPFSYKGL 727
           GALRNI VRPL+ +       R     S  PF P      +   WL  +       +   
Sbjct: 5   GALRNI-VRPLSVASSRALTPRISTNASMAPFCPAFPSPCKTPQWLHPL-------WNHF 56

Query: 726 HSLTETRYPKRRPGFRSRKKRTTIKPTGPYALVQHTPEEPILANKPNEGSVKNRNANEKK 547
           HSLT+TR+PKRRP  + R+KR +++P+GPYA VQ+TP +PIL NKPNEGSVK R  NEKK
Sbjct: 57  HSLTDTRFPKRRPSEKPRRKRASLRPSGPYAWVQYTPGQPILPNKPNEGSVKRR--NEKK 114

Query: 546 RIAQRKAFIKSEAKKRKVLVQEAKKKKRNLRIERKMAAVARDRAWAQRLAELQKLEAE 373
           R+ QR+AFI +E KKRK  +QEA +KK   R+ERKMAAVAR+R WA+RLAELQ+LE E
Sbjct: 115 RMRQRRAFILAEKKKRKAQLQEANRKKNIQRVERKMAAVAREREWAERLAELQRLEEE 172


>ref|NP_566942.1| uncharacterized protein [Arabidopsis thaliana]
           gi|6562253|emb|CAB62623.1| hypothetical protein
           [Arabidopsis thaliana] gi|98960951|gb|ABF58959.1|
           At3g51010 [Arabidopsis thaliana]
           gi|332645216|gb|AEE78737.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 188

 Score =  167 bits (424), Expect = 3e-39
 Identities = 99/187 (52%), Positives = 129/187 (68%), Gaps = 10/187 (5%)
 Frame = -2

Query: 903 GWGALRNIIVRPLTRSIFTHSPIRFPAKISNGPF---VPPA-----SEFRSWLDSIRQPL 748
           G+GA+R+I+ RPL+R++ + + + +    S+ PF   +P A     S F   +  +R P 
Sbjct: 2   GFGAIRSIL-RPLSRTLVSRAVVNY----SSAPFNATIPAAKPELCSFFGGSMTHLRLPW 56

Query: 747 PFSYKGLHSL--TETRYPKRRPGFRSRKKRTTIKPTGPYALVQHTPEEPILANKPNEGSV 574
                  HSL  T+TR PKRRP    ++KR+ +KP GPYA VQ+TP +PI +N PNEGSV
Sbjct: 57  IPMANHFHSLSLTDTRLPKRRPMTHPKRKRSKLKPPGPYAYVQYTPGQPISSNNPNEGSV 116

Query: 573 KNRNANEKKRIAQRKAFIKSEAKKRKVLVQEAKKKKRNLRIERKMAAVARDRAWAQRLAE 394
           K RNA  KKRI QR+AFI SE KKR+ LVQEAK+KKR  ++ERKMAAVARDRAWA+RL E
Sbjct: 117 KRRNA--KKRIGQRRAFILSEKKKRQALVQEAKRKKRIKQVERKMAAVARDRAWAERLIE 174

Query: 393 LQKLEAE 373
           LQ+LE E
Sbjct: 175 LQQLEEE 181


Top