BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00011990
         (527 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311407.1| predicted protein [Populus trichocarpa] gi|1...   258   5e-67
ref|XP_002269703.1| PREDICTED: H/ACA ribonucleoprotein complex s...   253   1e-65
dbj|BAJ53160.1| JHL10I11.6 [Jatropha curcas]                          249   2e-64
ref|XP_002512015.1| H/ACA ribonucleoprotein complex subunit, put...   247   9e-64
gb|AFK48249.1| unknown [Lotus japonicus]                              246   1e-63

>ref|XP_002311407.1| predicted protein [Populus trichocarpa] gi|118483385|gb|ABK93593.1|
           unknown [Populus trichocarpa]
           gi|118485555|gb|ABK94629.1| unknown [Populus
           trichocarpa] gi|222851227|gb|EEE88774.1| predicted
           protein [Populus trichocarpa]
          Length = 155

 Score =  258 bits (658), Expect = 5e-67
 Identities = 126/148 (85%), Positives = 142/148 (95%)
 Frame = -1

Query: 446 MGSDSEADKSSQKERKKITALAPIATPLAGKKLCKKTLKLVRKAAESKCLKRGVKEVVKS 267
           MGSDSE ++S+ KE+KKIT+LAPIA PLAGKKLCK+TLKLVRKA+ESKCLKRGVKEVVKS
Sbjct: 1   MGSDSETERSNIKEKKKITSLAPIAKPLAGKKLCKRTLKLVRKASESKCLKRGVKEVVKS 60

Query: 266 IRRGNKGLCIIAGNISPIDVITHVPILCEEAGIPYIYVPSKEDLATAGSTKRPTCCVLVL 87
           IRRG+KGLCIIAGNISPIDVITHVPILCEE+ IPY+YV SKEDLA+AG+TKRPTCCVLVL
Sbjct: 61  IRRGHKGLCIIAGNISPIDVITHVPILCEESDIPYVYVTSKEDLASAGATKRPTCCVLVL 120

Query: 86  TKPTKGEMGEEEQEKLKADYGQVVSDVT 3
           TKPTKGE+G+E+QEKLKADY QVVSDV+
Sbjct: 121 TKPTKGEIGKEDQEKLKADYDQVVSDVS 148


>ref|XP_002269703.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 2-like protein
           [Vitis vinifera] gi|147867156|emb|CAN80504.1|
           hypothetical protein VITISV_035185 [Vitis vinifera]
           gi|297734127|emb|CBI15374.3| unnamed protein product
           [Vitis vinifera]
          Length = 157

 Score =  253 bits (646), Expect = 1e-65
 Identities = 123/150 (82%), Positives = 141/150 (94%), Gaps = 2/150 (1%)
 Frame = -1

Query: 446 MGSDSEADKSS--QKERKKITALAPIATPLAGKKLCKKTLKLVRKAAESKCLKRGVKEVV 273
           MGSDSEA++S+  +KE+KK++ALAPIA PLAGKKLCK+TLKL+R+AAE KCLKRGVKEVV
Sbjct: 1   MGSDSEAERSAHKEKEKKKLSALAPIAKPLAGKKLCKRTLKLIRRAAEHKCLKRGVKEVV 60

Query: 272 KSIRRGNKGLCIIAGNISPIDVITHVPILCEEAGIPYIYVPSKEDLATAGSTKRPTCCVL 93
           K IRRG+KG C+IAGNI+PIDVITHVPILCEEA IPY+YVPSKEDLA AGSTKRPTCCVL
Sbjct: 61  KGIRRGDKGFCVIAGNITPIDVITHVPILCEEADIPYVYVPSKEDLANAGSTKRPTCCVL 120

Query: 92  VLTKPTKGEMGEEEQEKLKADYGQVVSDVT 3
           VLTKPTKGE+G+EEQEKLKA+Y QVVSDV+
Sbjct: 121 VLTKPTKGELGQEEQEKLKAEYTQVVSDVS 150


>dbj|BAJ53160.1| JHL10I11.6 [Jatropha curcas]
          Length = 155

 Score =  249 bits (636), Expect = 2e-64
 Identities = 122/148 (82%), Positives = 138/148 (93%)
 Frame = -1

Query: 446 MGSDSEADKSSQKERKKITALAPIATPLAGKKLCKKTLKLVRKAAESKCLKRGVKEVVKS 267
           MGSDSEA+KS ++E+KK+ AL+PIA PLAGKKL KKTLKLVRKAAE KCLKRGVKEVVKS
Sbjct: 1   MGSDSEAEKSQKQEKKKVIALSPIAKPLAGKKLSKKTLKLVRKAAEHKCLKRGVKEVVKS 60

Query: 266 IRRGNKGLCIIAGNISPIDVITHVPILCEEAGIPYIYVPSKEDLATAGSTKRPTCCVLVL 87
           IRRG+KGLC+IAGNISPIDVITHVPILCEE+ IPYIYV SKEDLA AG+TKRPTCCVLVL
Sbjct: 61  IRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVSSKEDLANAGATKRPTCCVLVL 120

Query: 86  TKPTKGEMGEEEQEKLKADYGQVVSDVT 3
           TKP KG++G+EEQEKLKAD+ QVV+DV+
Sbjct: 121 TKPPKGDIGQEEQEKLKADFSQVVADVS 148


>ref|XP_002512015.1| H/ACA ribonucleoprotein complex subunit, putative [Ricinus
           communis] gi|223549195|gb|EEF50684.1| H/ACA
           ribonucleoprotein complex subunit, putative [Ricinus
           communis]
          Length = 157

 Score =  247 bits (630), Expect = 9e-64
 Identities = 123/150 (82%), Positives = 137/150 (91%), Gaps = 2/150 (1%)
 Frame = -1

Query: 446 MGSDSEADKSS--QKERKKITALAPIATPLAGKKLCKKTLKLVRKAAESKCLKRGVKEVV 273
           MGSDSEA++S   +KE+KKI AL+PIA PLAGKKLCK+TLKLVRKAAE KCLKRGVKEVV
Sbjct: 1   MGSDSEAERSHKHEKEKKKIIALSPIAKPLAGKKLCKRTLKLVRKAAEHKCLKRGVKEVV 60

Query: 272 KSIRRGNKGLCIIAGNISPIDVITHVPILCEEAGIPYIYVPSKEDLATAGSTKRPTCCVL 93
           KSIRRG+KGLC+IAGNISPIDVITHVPILCEEA IPY+YVPSKEDLA AG TKRPTCCVL
Sbjct: 61  KSIRRGHKGLCVIAGNISPIDVITHVPILCEEADIPYVYVPSKEDLANAGVTKRPTCCVL 120

Query: 92  VLTKPTKGEMGEEEQEKLKADYGQVVSDVT 3
           VLTKP KGE+ +EEQEKLKAD+ QV +DV+
Sbjct: 121 VLTKPPKGEIPQEEQEKLKADFSQVAADVS 150


>gb|AFK48249.1| unknown [Lotus japonicus]
          Length = 157

 Score =  246 bits (628), Expect = 1e-63
 Identities = 122/150 (81%), Positives = 137/150 (91%), Gaps = 2/150 (1%)
 Frame = -1

Query: 446 MGSDSEADKSSQKE--RKKITALAPIATPLAGKKLCKKTLKLVRKAAESKCLKRGVKEVV 273
           MGSDSE +KS QKE  RKK+ A+APIA PLAGKKLCK+TLKLVR+AAE KCLKRGVKEVV
Sbjct: 1   MGSDSEGEKSVQKEKERKKLLAVAPIAKPLAGKKLCKRTLKLVRRAAEHKCLKRGVKEVV 60

Query: 272 KSIRRGNKGLCIIAGNISPIDVITHVPILCEEAGIPYIYVPSKEDLATAGSTKRPTCCVL 93
           KSIRRG+KGLC+IAGNISPIDVITHVP+LCEE+ +PY+YV SKEDLA+AG+TKRPTCCVL
Sbjct: 61  KSIRRGHKGLCVIAGNISPIDVITHVPVLCEESDVPYVYVTSKEDLASAGATKRPTCCVL 120

Query: 92  VLTKPTKGEMGEEEQEKLKADYGQVVSDVT 3
           VLTKP KGEM + EQEKLK+DY QVVSDVT
Sbjct: 121 VLTKPAKGEMEKGEQEKLKSDYDQVVSDVT 150