BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00011970
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533879.1| poly(A) polymerase, putative [Ricinus commun...    80   2e-13
ref|XP_002266551.2| PREDICTED: CCA tRNA nucleotidyltransferase, ...    76   3e-12
ref|XP_002327340.1| predicted protein [Populus trichocarpa] gi|2...    76   3e-12
ref|XP_004140936.1| PREDICTED: CCA tRNA nucleotidyltransferase, ...    74   9e-12
ref|XP_004171177.1| PREDICTED: CCA tRNA nucleotidyltransferase, ...    74   2e-11

>ref|XP_002533879.1| poly(A) polymerase, putative [Ricinus communis]
           gi|223526180|gb|EEF28510.1| poly(A) polymerase, putative
           [Ricinus communis]
          Length = 577

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 40/67 (59%), Positives = 51/67 (76%)
 Frame = +3

Query: 111 KSYNCRAVQTMSISLTEGQQEVKVKEKIQLNEKEKQIFDRLLQVVTHFNLQTQLRVAGGW 290
           + ++CRA+ T +      Q  ++VK+KI+L E EK+IFDRLL  + HFNLQTQLRVAGGW
Sbjct: 48  RRFSCRAMGTST-----PQAVIQVKDKIELTEIEKKIFDRLLNTLRHFNLQTQLRVAGGW 102

Query: 291 VRDKLLG 311
           VRDKLLG
Sbjct: 103 VRDKLLG 109


>ref|XP_002266551.2| PREDICTED: CCA tRNA nucleotidyltransferase, mitochondrial [Vitis
           vinifera]
          Length = 564

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 48/105 (45%), Positives = 61/105 (58%), Gaps = 2/105 (1%)
 Frame = +3

Query: 3   AFNAHRLLLTYPQRHLTFLAPFKLPKFHLNSKLGF--YKSYNCRAVQTMSISLTEGQQEV 176
           A N++  L       L  L PF LP    ++  GF      +CRA+ +   S       V
Sbjct: 4   ALNSNYCLYRCQTHRLLQLQPFLLP---CSTAFGFPTLSPLHCRAMASSPPS-------V 53

Query: 177 KVKEKIQLNEKEKQIFDRLLQVVTHFNLQTQLRVAGGWVRDKLLG 311
           +V++ I L  KE QIF +LLQVV HF+L+TQLRVAGGWVRDKLLG
Sbjct: 54  QVRDSIDLTPKETQIFQKLLQVVRHFSLRTQLRVAGGWVRDKLLG 98


>ref|XP_002327340.1| predicted protein [Populus trichocarpa] gi|222835710|gb|EEE74145.1|
           predicted protein [Populus trichocarpa]
          Length = 528

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 34/46 (73%), Positives = 41/46 (89%)
 Frame = +3

Query: 174 VKVKEKIQLNEKEKQIFDRLLQVVTHFNLQTQLRVAGGWVRDKLLG 311
           ++VK+KI+LNE EKQIFDRL+  + HFNL T+LRVAGGWVRDKLLG
Sbjct: 14  IEVKDKIELNEVEKQIFDRLVNTLRHFNLNTELRVAGGWVRDKLLG 59


>ref|XP_004140936.1| PREDICTED: CCA tRNA nucleotidyltransferase, mitochondrial-like
           [Cucumis sativus]
          Length = 577

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 43/98 (43%), Positives = 59/98 (60%), Gaps = 3/98 (3%)
 Frame = +3

Query: 27  LTYPQRHLTFL---APFKLPKFHLNSKLGFYKSYNCRAVQTMSISLTEGQQEVKVKEKIQ 197
           L++P   L F    +PFK P     S             ++M+ +++  +  V+VK+ I+
Sbjct: 21  LSFPTSFLKFPPPHSPFKFPTTRFPSP------------KSMTTAISSPKPLVQVKDNIE 68

Query: 198 LNEKEKQIFDRLLQVVTHFNLQTQLRVAGGWVRDKLLG 311
           L E E++IF RLL  + HFNLQTQLRVAGGWVRDKLLG
Sbjct: 69  LTETEEKIFHRLLGTLRHFNLQTQLRVAGGWVRDKLLG 106


>ref|XP_004171177.1| PREDICTED: CCA tRNA nucleotidyltransferase, mitochondrial-like
           [Cucumis sativus]
          Length = 577

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 43/98 (43%), Positives = 58/98 (59%), Gaps = 3/98 (3%)
 Frame = +3

Query: 27  LTYPQRHLTFLAP---FKLPKFHLNSKLGFYKSYNCRAVQTMSISLTEGQQEVKVKEKIQ 197
           L++P   L F  P   FK P     S             ++M+ +++  +  V+VK+ I+
Sbjct: 21  LSFPTSFLKFPPPHPPFKFPTTRFPSP------------KSMTTAISSPKPLVQVKDNIE 68

Query: 198 LNEKEKQIFDRLLQVVTHFNLQTQLRVAGGWVRDKLLG 311
           L E E++IF RLL  + HFNLQTQLRVAGGWVRDKLLG
Sbjct: 69  LTETEEKIFHRLLGTLRHFNLQTQLRVAGGWVRDKLLG 106