BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00011969
         (1806 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266551.2| PREDICTED: CCA tRNA nucleotidyltransferase, ...   675   0.0  
emb|CBI18302.3| unnamed protein product [Vitis vinifera]              675   0.0  
ref|XP_002327340.1| predicted protein [Populus trichocarpa] gi|2...   634   e-179
ref|XP_002533879.1| poly(A) polymerase, putative [Ricinus commun...   608   e-171
ref|XP_004171177.1| PREDICTED: CCA tRNA nucleotidyltransferase, ...   605   e-170

>ref|XP_002266551.2| PREDICTED: CCA tRNA nucleotidyltransferase, mitochondrial [Vitis
            vinifera]
          Length = 564

 Score =  675 bits (1742), Expect = 0.0
 Identities = 333/476 (69%), Positives = 404/476 (84%), Gaps = 2/476 (0%)
 Frame = -2

Query: 1805 VRDKLLGKECYDIDIALDNMLGKEFCEKVNEFLLHSGEDKCGIGVIQCNPDQSKHLETAR 1626
            VRDKLLGKECYDIDIALD+MLG+EFCEK+N++L  +GE+K GIGVIQCNPDQSKHLETAR
Sbjct: 92   VRDKLLGKECYDIDIALDDMLGREFCEKINDYLSCTGEEKQGIGVIQCNPDQSKHLETAR 151

Query: 1625 MRLYDIWIDFVNLRSENYSENSRIPTMTFGTAKDDAYRRDLTINSLFYNINTNAVEDFTE 1446
            MRL+D WIDFVNLRSE+YSENSRIPTM FGTAK+DAYRRDLTINSLFYNINT++VEDFT 
Sbjct: 152  MRLFDEWIDFVNLRSEDYSENSRIPTMRFGTAKEDAYRRDLTINSLFYNINTSSVEDFTG 211

Query: 1445 RGIKDLKSGKIVTPLPPKETFLDDPLRVLRAIRFGARFGFVLDKELKEAASSDEVKAAIA 1266
            RGI+DLKSGKIVTPLPPK+TFLDDPLRVLRAIRFGARFGF+LD+ELK AA  D+V+AAIA
Sbjct: 212  RGIEDLKSGKIVTPLPPKDTFLDDPLRVLRAIRFGARFGFILDEELKLAAGCDDVRAAIA 271

Query: 1265 DKISRERIGHEIDLMISGNEPVKAMAYICELQLFWVVFSLPCLPHESGSPNFEDRLCVAY 1086
            DKISRERIGHEIDLMISGNEPVKAM YIC+L LF VVFSLP +   + S    DRLC+ Y
Sbjct: 272  DKISRERIGHEIDLMISGNEPVKAMTYICDLLLFSVVFSLPPIVKPAISEEC-DRLCIGY 330

Query: 1085 VDAAWSLLQVVGFSTFNDDQRRLYLYGVLFLPLRKSMYSDNKGKKAIKVPVVNHIFRNSL 906
            +DA W+L+Q++G STFND+QRRLYLY  LFLP RK++Y   +G KA K+PVVNHI RNSL
Sbjct: 331  IDAGWNLIQLIGSSTFNDEQRRLYLYAALFLPFRKTLY---EGGKARKIPVVNHIIRNSL 387

Query: 905  KLKASDAETVINLHVASERFVSLVPFLTSKEMNVEEDSE--IENFNVSDTSKQRIVAGKL 732
            KL+ASDA+TV+++H A E+F+SL+PF+ S E     ++E  IE  ++  TSK RI+ G L
Sbjct: 388  KLRASDADTVVSIHCAVEKFISLIPFIESTESIQISEAEWGIEILDLPVTSKLRILTGLL 447

Query: 731  LREIKGFWRVSLLISTLIFPSDSSLAEGSSEMCAELDKSSQMYRRVENIILELGLDNVWE 552
            LREIKGFWRV+L++STL++P+D +     S+   +LDK  +++  VEN I+ LGL+ VWE
Sbjct: 448  LREIKGFWRVALMVSTLLYPNDINHTRDISKNNFQLDKRRKVFEMVENAIVGLGLEEVWE 507

Query: 551  MKPLVNGKEIMSILQLKTGGPQVKEWQNRLVEWQLAYPSGTAEECLDWMRQTHSKR 384
            +KPLVNGK+IM++LQLK+GGP V++WQ +L++WQLA+PSGTAEECLDWMRQ   KR
Sbjct: 508  LKPLVNGKDIMNVLQLKSGGPLVRDWQQKLIQWQLAHPSGTAEECLDWMRQKRPKR 563


>emb|CBI18302.3| unnamed protein product [Vitis vinifera]
          Length = 519

 Score =  675 bits (1742), Expect = 0.0
 Identities = 333/476 (69%), Positives = 404/476 (84%), Gaps = 2/476 (0%)
 Frame = -2

Query: 1805 VRDKLLGKECYDIDIALDNMLGKEFCEKVNEFLLHSGEDKCGIGVIQCNPDQSKHLETAR 1626
            VRDKLLGKECYDIDIALD+MLG+EFCEK+N++L  +GE+K GIGVIQCNPDQSKHLETAR
Sbjct: 47   VRDKLLGKECYDIDIALDDMLGREFCEKINDYLSCTGEEKQGIGVIQCNPDQSKHLETAR 106

Query: 1625 MRLYDIWIDFVNLRSENYSENSRIPTMTFGTAKDDAYRRDLTINSLFYNINTNAVEDFTE 1446
            MRL+D WIDFVNLRSE+YSENSRIPTM FGTAK+DAYRRDLTINSLFYNINT++VEDFT 
Sbjct: 107  MRLFDEWIDFVNLRSEDYSENSRIPTMRFGTAKEDAYRRDLTINSLFYNINTSSVEDFTG 166

Query: 1445 RGIKDLKSGKIVTPLPPKETFLDDPLRVLRAIRFGARFGFVLDKELKEAASSDEVKAAIA 1266
            RGI+DLKSGKIVTPLPPK+TFLDDPLRVLRAIRFGARFGF+LD+ELK AA  D+V+AAIA
Sbjct: 167  RGIEDLKSGKIVTPLPPKDTFLDDPLRVLRAIRFGARFGFILDEELKLAAGCDDVRAAIA 226

Query: 1265 DKISRERIGHEIDLMISGNEPVKAMAYICELQLFWVVFSLPCLPHESGSPNFEDRLCVAY 1086
            DKISRERIGHEIDLMISGNEPVKAM YIC+L LF VVFSLP +   + S    DRLC+ Y
Sbjct: 227  DKISRERIGHEIDLMISGNEPVKAMTYICDLLLFSVVFSLPPIVKPAISEEC-DRLCIGY 285

Query: 1085 VDAAWSLLQVVGFSTFNDDQRRLYLYGVLFLPLRKSMYSDNKGKKAIKVPVVNHIFRNSL 906
            +DA W+L+Q++G STFND+QRRLYLY  LFLP RK++Y   +G KA K+PVVNHI RNSL
Sbjct: 286  IDAGWNLIQLIGSSTFNDEQRRLYLYAALFLPFRKTLY---EGGKARKIPVVNHIIRNSL 342

Query: 905  KLKASDAETVINLHVASERFVSLVPFLTSKEMNVEEDSE--IENFNVSDTSKQRIVAGKL 732
            KL+ASDA+TV+++H A E+F+SL+PF+ S E     ++E  IE  ++  TSK RI+ G L
Sbjct: 343  KLRASDADTVVSIHCAVEKFISLIPFIESTESIQISEAEWGIEILDLPVTSKLRILTGLL 402

Query: 731  LREIKGFWRVSLLISTLIFPSDSSLAEGSSEMCAELDKSSQMYRRVENIILELGLDNVWE 552
            LREIKGFWRV+L++STL++P+D +     S+   +LDK  +++  VEN I+ LGL+ VWE
Sbjct: 403  LREIKGFWRVALMVSTLLYPNDINHTRDISKNNFQLDKRRKVFEMVENAIVGLGLEEVWE 462

Query: 551  MKPLVNGKEIMSILQLKTGGPQVKEWQNRLVEWQLAYPSGTAEECLDWMRQTHSKR 384
            +KPLVNGK+IM++LQLK+GGP V++WQ +L++WQLA+PSGTAEECLDWMRQ   KR
Sbjct: 463  LKPLVNGKDIMNVLQLKSGGPLVRDWQQKLIQWQLAHPSGTAEECLDWMRQKRPKR 518


>ref|XP_002327340.1| predicted protein [Populus trichocarpa] gi|222835710|gb|EEE74145.1|
            predicted protein [Populus trichocarpa]
          Length = 528

 Score =  634 bits (1635), Expect = e-179
 Identities = 317/483 (65%), Positives = 388/483 (80%), Gaps = 5/483 (1%)
 Frame = -2

Query: 1805 VRDKLLGKECYDIDIALDNMLGKEFCEKVNEFLLHSGEDKCGIGVIQCNPDQSKHLETAR 1626
            VRDKLLGKEC DIDIA+DNMLG EF +KV E+LL +GE+  G+GVI  NPDQSKHLETAR
Sbjct: 53   VRDKLLGKECCDIDIAIDNMLGSEFVDKVREYLLSTGEEAHGVGVIPRNPDQSKHLETAR 112

Query: 1625 MRLYDIWIDFVNLRSENYSENSRIPTMTFGTAKDDAYRRDLTINSLFYNINTNAVEDFTE 1446
            MRL D+WIDFVNLRSE+YSENSRIPTMTFGTAK+DAYRRDLTINSLFYNINT++VED T 
Sbjct: 113  MRLLDLWIDFVNLRSEDYSENSRIPTMTFGTAKEDAYRRDLTINSLFYNINTSSVEDLTG 172

Query: 1445 RGIKDLKSGKIVTPLPPKETFLDDPLRVLRAIRFGARFGFVLDKELKEAASSDEVKAAIA 1266
            RGI+DLKSGKIVTPLPPK+TFLDDPLRVLRAIRFGARFGFVL++ELKEAA+ D+VK A+ 
Sbjct: 173  RGIEDLKSGKIVTPLPPKDTFLDDPLRVLRAIRFGARFGFVLEEELKEAAACDDVKNALK 232

Query: 1265 DKISRERIGHEIDLMISGNEPVKAMAYICELQLFWVVFSLPCLPHESGSPNFEDR---LC 1095
             KIS+ERIG EIDLMISGN+PVKAM YI +L LFWVVF+L    H    P   +    LC
Sbjct: 233  AKISKERIGTEIDLMISGNQPVKAMTYIADLTLFWVVFNL----HPKVEPTVSEECQGLC 288

Query: 1094 VAYVDAAWSLLQVVGFSTFNDDQRRLYLYGVLFLPLRKSMYSDNKGKKAIKVPVVNHIFR 915
            VAY+DAAW+L+ ++G S+F  +QRRL LY  LFLPLR ++Y D KGK   KVPVVN+IFR
Sbjct: 289  VAYLDAAWNLIHLIGGSSFTGEQRRLCLYAALFLPLRNTIYKDEKGK---KVPVVNYIFR 345

Query: 914  NSLKLKASDAETVINLHVASERFVSLVPFLTSKE--MNVEEDSEIENFNVSDTSKQRIVA 741
            +SLK KASD ETVI +H + E+F++L+P LTS +     E D  +E F+V  TSK R+  
Sbjct: 346  DSLKQKASDPETVIKIHRSLEKFLTLIPLLTSNDDTQPAEVDMGMELFDVPITSKLRVAT 405

Query: 740  GKLLREIKGFWRVSLLISTLIFPSDSSLAEGSSEMCAELDKSSQMYRRVENIILELGLDN 561
            G LLRE+K FWRV LLIST+++PSD+   +   E   ELD+   +++  E+ I+ LGL+ 
Sbjct: 406  GFLLREVKEFWRVGLLISTMLYPSDTDSTQDFLEKKFELDRRKDLFKAAEDAIVNLGLER 465

Query: 560  VWEMKPLVNGKEIMSILQLKTGGPQVKEWQNRLVEWQLAYPSGTAEECLDWMRQTHSKRA 381
            VW++KPLVNGK+IM++LQLK+GGP VKEWQ +L+ WQ A+P+GT EECLDWM++TH KRA
Sbjct: 466  VWDLKPLVNGKDIMTVLQLKSGGPVVKEWQQKLLAWQFAHPAGTVEECLDWMKETHLKRA 525

Query: 380  KLK 372
            K++
Sbjct: 526  KME 528


>ref|XP_002533879.1| poly(A) polymerase, putative [Ricinus communis]
            gi|223526180|gb|EEF28510.1| poly(A) polymerase, putative
            [Ricinus communis]
          Length = 577

 Score =  608 bits (1569), Expect = e-171
 Identities = 300/480 (62%), Positives = 387/480 (80%), Gaps = 2/480 (0%)
 Frame = -2

Query: 1805 VRDKLLGKECYDIDIALDNMLGKEFCEKVNEFLLHSGEDKCGIGVIQCNPDQSKHLETAR 1626
            VRDKLLGK+CYDIDIA+DNMLG EF +KV E+LL +GE+  G+G+I  NPDQSKHLETAR
Sbjct: 103  VRDKLLGKDCYDIDIAIDNMLGSEFVDKVREYLLSTGEEVGGLGIIPRNPDQSKHLETAR 162

Query: 1625 MRLYDIWIDFVNLRSENYSENSRIPTMTFGTAKDDAYRRDLTINSLFYNINTNAVEDFTE 1446
            MRL+D+WIDFVNLR E+Y+E+SRIPTM FGTA++DA+RRDLTINSLFYNINT++VED TE
Sbjct: 163  MRLFDLWIDFVNLRCEDYTEDSRIPTMKFGTAEEDAFRRDLTINSLFYNINTSSVEDLTE 222

Query: 1445 RGIKDLKSGKIVTPLPPKETFLDDPLRVLRAIRFGARFGFVLDKELKEAASSDEVKAAIA 1266
            RGI+DLK GKIVTPLPPK TFLDDPLRVLRAIRFGARFGF+LD+ELKEAA+ D+VK A+A
Sbjct: 223  RGIEDLKFGKIVTPLPPKATFLDDPLRVLRAIRFGARFGFILDEELKEAAACDDVKNALA 282

Query: 1265 DKISRERIGHEIDLMISGNEPVKAMAYICELQLFWVVFSLPCLPHESGSPNFEDRLCVAY 1086
             KIS+ERIG+EIDLM+SGN+PVKAM YI +L LFW++F LP     + S     +LC+AY
Sbjct: 283  AKISKERIGNEIDLMLSGNQPVKAMTYIGDLTLFWIIFGLPPKVEPAVSEGCH-KLCIAY 341

Query: 1085 VDAAWSLLQVVGFSTFNDDQRRLYLYGVLFLPLRKSMYSDNKGKKAIKVPVVNHIFRNSL 906
            +DA W+L+Q +  S F D+QRRL LY  LFLP R  +Y + KGK    VPVVN IF++SL
Sbjct: 342  LDATWNLIQSIRSSFFTDEQRRLSLYAALFLPFRNIIYIE-KGK---NVPVVNFIFKDSL 397

Query: 905  KLKASDAETVINLHVASERFVSLVPFLTSKE--MNVEEDSEIENFNVSDTSKQRIVAGKL 732
            K KASD+ETV+ +H + E+F++++P LTS +     E D  +E  +V  ++K R++ G L
Sbjct: 398  KQKASDSETVMKIHKSLEKFLNIIPLLTSDDDTQPAEVDWALELIDVPFSAKLRVLTGFL 457

Query: 731  LREIKGFWRVSLLISTLIFPSDSSLAEGSSEMCAELDKSSQMYRRVENIILELGLDNVWE 552
            LREIK FWRV+LLIST+I+P+D    +   +   ELDK  ++++ VE+ I + GL+ +W+
Sbjct: 458  LREIKDFWRVALLISTMIYPADIDSTQSFLDKQFELDKRKELFKTVEDAITKQGLEKIWD 517

Query: 551  MKPLVNGKEIMSILQLKTGGPQVKEWQNRLVEWQLAYPSGTAEECLDWMRQTHSKRAKLK 372
            +KPLVNGKEIMS+LQLK+GGP V+EWQ +L+ WQLA+P+GTAEECLDWM++TH KRA+++
Sbjct: 518  VKPLVNGKEIMSVLQLKSGGPLVREWQQKLLAWQLAHPTGTAEECLDWMKETHLKRARIE 577


>ref|XP_004171177.1| PREDICTED: CCA tRNA nucleotidyltransferase, mitochondrial-like
            [Cucumis sativus]
          Length = 577

 Score =  605 bits (1560), Expect = e-170
 Identities = 310/480 (64%), Positives = 378/480 (78%), Gaps = 3/480 (0%)
 Frame = -2

Query: 1805 VRDKLLGKECYDIDIALDNMLGKEFCEKVNEFLLHSGEDKCGIGVIQCNPDQSKHLETAR 1626
            VRDKLLGK+CYDIDIALDNMLG EF +KV E+LL  GE+  G+ VI CNPDQSKHLETAR
Sbjct: 100  VRDKLLGKDCYDIDIALDNMLGSEFVDKVREYLLTVGEEAQGVAVIPCNPDQSKHLETAR 159

Query: 1625 MRLYDIWIDFVNLRSENYSENSRIPT-MTFGTAKDDAYRRDLTINSLFYNINTNAVEDFT 1449
            MR++D+WIDFVNLR E YSENSRIPT   FGTA++DAYRRDLTINSLFYNIN + VEDFT
Sbjct: 160  MRIFDMWIDFVNLRCEEYSENSRIPTKQKFGTAEEDAYRRDLTINSLFYNINLSIVEDFT 219

Query: 1448 ERGIKDLKSGKIVTPLPPKETFLDDPLRVLRAIRFGARFGFVLDKELKEAASSDEVKAAI 1269
            +RGI DLK GKIVTPLP K TF+DDPLRVLRAIRF ARF F LD+ELKEAA+ +EVKAA+
Sbjct: 220  KRGISDLKFGKIVTPLPAKATFMDDPLRVLRAIRFCARFEFTLDEELKEAAACEEVKAAL 279

Query: 1268 ADKISRERIGHEIDLMISGNEPVKAMAYICELQLFWVVFSLPCLPHESGSPNFEDRLCVA 1089
            A KISRERIG EIDLMI+GN+PVKAM+YI +L LFW VF+LP    E       +RLCVA
Sbjct: 280  AAKISRERIGVEIDLMIAGNQPVKAMSYISDLTLFWTVFTLPS-NIEPEISEVCNRLCVA 338

Query: 1088 YVDAAWSLLQVVGFSTFNDDQRRLYLYGVLFLPLRKSMYSDNKGKKAIKVPVVNHIFRNS 909
             +DA W+L+Q +   TF+D+Q+RL LY  LFLP RK  + D K K   K+P+VN+IFR+S
Sbjct: 339  CLDATWNLIQHINCFTFSDEQKRLSLYASLFLPFRKFTFKDKKSK---KIPIVNYIFRDS 395

Query: 908  LKLKASDAETVINLHVASERFVSLVPFLTSKEMNVEE--DSEIENFNVSDTSKQRIVAGK 735
            LK KASDAETV+N+H A E+F+SL+P L SKE       D  +E  +V  TS+ R++ G 
Sbjct: 396  LKRKASDAETVVNVHQALEKFLSLIPLLVSKEEIQPNGVDWGVECADVPATSRIRVLTGL 455

Query: 734  LLREIKGFWRVSLLISTLIFPSDSSLAEGSSEMCAELDKSSQMYRRVENIILELGLDNVW 555
            LLREIK FW V+LL++TL++P+D   A+       EL+K  +++  V N I++LGL+NVW
Sbjct: 456  LLREIKDFWPVALLMATLLYPADVDYAQDLLNRHFELEKRKELFDDVYNEIVKLGLENVW 515

Query: 554  EMKPLVNGKEIMSILQLKTGGPQVKEWQNRLVEWQLAYPSGTAEECLDWMRQTHSKRAKL 375
            EMKPLVNGKEIM+ILQLK GGP V+EWQ +++ WQLA+PSGT+EECLDW+R+THSKR KL
Sbjct: 516  EMKPLVNGKEIMNILQLKAGGPLVREWQQKILAWQLAHPSGTSEECLDWIRETHSKRVKL 575