BLASTX nr result

ID: Coptis23_contig00011968 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00011968
         (849 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308634.1| predicted protein [Populus trichocarpa] gi|2...    91   4e-16
ref|XP_002284812.1| PREDICTED: uncharacterized protein LOC100268...    89   9e-16
emb|CBI28118.3| unnamed protein product [Vitis vinifera]               84   3e-14
ref|XP_002516608.1| conserved hypothetical protein [Ricinus comm...    79   1e-12
ref|NP_001242337.1| uncharacterized protein LOC100781938 [Glycin...    79   1e-12

>ref|XP_002308634.1| predicted protein [Populus trichocarpa] gi|222854610|gb|EEE92157.1|
           predicted protein [Populus trichocarpa]
          Length = 194

 Score = 90.5 bits (223), Expect = 4e-16
 Identities = 47/86 (54%), Positives = 61/86 (70%), Gaps = 1/86 (1%)
 Frame = -3

Query: 571 NLSEESEMDLAILLSNYPGVSDQSIVDVYFANAGDLEASLDMLKQLEF-PLEFDQCLPDT 395
           N+ EE EMDL  L  N+PG+SD+S+  VY AN GD++A++DML QLEF  LE    LPDT
Sbjct: 93  NVDEEFEMDLEYLRINFPGISDESLTGVYMANKGDIDAAIDMLNQLEFDTLESSGNLPDT 152

Query: 394 LDIGDVADFGSSAEVTTVIPKAILGE 317
           LDIGDV +   SAE ++V PK ++ E
Sbjct: 153 LDIGDVYEPRPSAEASSVKPKTVVDE 178


>ref|XP_002284812.1| PREDICTED: uncharacterized protein LOC100268154 isoform 1 [Vitis
           vinifera]
          Length = 198

 Score = 89.4 bits (220), Expect = 9e-16
 Identities = 47/83 (56%), Positives = 64/83 (77%), Gaps = 1/83 (1%)
 Frame = -3

Query: 562 EESEMDLAILLSNYPGVSDQSIVDVYFANAGDLEASLDMLKQLEF-PLEFDQCLPDTLDI 386
           E+S+MDLA L + +PG+SDQS++DVY AN GDLEAS+DML QLEF P++  + LP++LDI
Sbjct: 103 EDSQMDLAYLGTLFPGISDQSLLDVYTANGGDLEASIDMLNQLEFYPVDARRHLPESLDI 162

Query: 385 GDVADFGSSAEVTTVIPKAILGE 317
           GDV+D  SSAE ++ +     GE
Sbjct: 163 GDVSDVKSSAEGSSKLKGICPGE 185


>emb|CBI28118.3| unnamed protein product [Vitis vinifera]
          Length = 92

 Score = 84.3 bits (207), Expect = 3e-14
 Identities = 45/79 (56%), Positives = 60/79 (75%), Gaps = 1/79 (1%)
 Frame = -3

Query: 550 MDLAILLSNYPGVSDQSIVDVYFANAGDLEASLDMLKQLEF-PLEFDQCLPDTLDIGDVA 374
           MDLA L + +PG+SDQS++DVY AN GDLEAS+DML QLEF P++  + LP++LDIGDV+
Sbjct: 1   MDLAYLGTLFPGISDQSLLDVYTANGGDLEASIDMLNQLEFYPVDARRHLPESLDIGDVS 60

Query: 373 DFGSSAEVTTVIPKAILGE 317
           D  SSAE ++ +     GE
Sbjct: 61  DVKSSAEGSSKLKGICPGE 79


>ref|XP_002516608.1| conserved hypothetical protein [Ricinus communis]
           gi|223544428|gb|EEF45949.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 194

 Score = 79.3 bits (194), Expect = 1e-12
 Identities = 42/77 (54%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
 Frame = -3

Query: 544 LAILLSNYPGVSDQSIVDVYFANAGDLEASLDMLKQLEF-PLEFDQCLPDTLDIGDVADF 368
           L  L +++PGVSD+S+ DVY AN  DLEA++DML  LEF   E+ + LPDTLDIGDV++ 
Sbjct: 101 LEFLQASFPGVSDESLNDVYKANKCDLEATIDMLNHLEFDTFEYSENLPDTLDIGDVSEL 160

Query: 367 GSSAEVTTVIPKAILGE 317
           GS AE  +V  K + GE
Sbjct: 161 GSLAECASVKLKNVAGE 177


>ref|NP_001242337.1| uncharacterized protein LOC100781938 [Glycine max]
           gi|255640675|gb|ACU20622.1| unknown [Glycine max]
          Length = 212

 Score = 79.0 bits (193), Expect = 1e-12
 Identities = 45/90 (50%), Positives = 61/90 (67%), Gaps = 3/90 (3%)
 Frame = -3

Query: 577 NGNLSEESEMDLAILLSNYPGVSDQSIVDVYFANAGDLEASLDMLKQLEFPLEFDQ---C 407
           N  L EE +MDL  L  N+PG+S QS+VDVY  N+GDL+A++DML QLE  LE D+    
Sbjct: 95  NQLLDEEVDMDLEYLRMNFPGISYQSLVDVYNVNSGDLDAAIDMLSQLE--LEGDETSGI 152

Query: 406 LPDTLDIGDVADFGSSAEVTTVIPKAILGE 317
           LP+TLDIGDV++ G  A+  ++  K +  E
Sbjct: 153 LPETLDIGDVSESGLPADSASLKQKNVAEE 182


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