BLASTX nr result
ID: Coptis23_contig00011968
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00011968 (849 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002308634.1| predicted protein [Populus trichocarpa] gi|2... 91 4e-16 ref|XP_002284812.1| PREDICTED: uncharacterized protein LOC100268... 89 9e-16 emb|CBI28118.3| unnamed protein product [Vitis vinifera] 84 3e-14 ref|XP_002516608.1| conserved hypothetical protein [Ricinus comm... 79 1e-12 ref|NP_001242337.1| uncharacterized protein LOC100781938 [Glycin... 79 1e-12 >ref|XP_002308634.1| predicted protein [Populus trichocarpa] gi|222854610|gb|EEE92157.1| predicted protein [Populus trichocarpa] Length = 194 Score = 90.5 bits (223), Expect = 4e-16 Identities = 47/86 (54%), Positives = 61/86 (70%), Gaps = 1/86 (1%) Frame = -3 Query: 571 NLSEESEMDLAILLSNYPGVSDQSIVDVYFANAGDLEASLDMLKQLEF-PLEFDQCLPDT 395 N+ EE EMDL L N+PG+SD+S+ VY AN GD++A++DML QLEF LE LPDT Sbjct: 93 NVDEEFEMDLEYLRINFPGISDESLTGVYMANKGDIDAAIDMLNQLEFDTLESSGNLPDT 152 Query: 394 LDIGDVADFGSSAEVTTVIPKAILGE 317 LDIGDV + SAE ++V PK ++ E Sbjct: 153 LDIGDVYEPRPSAEASSVKPKTVVDE 178 >ref|XP_002284812.1| PREDICTED: uncharacterized protein LOC100268154 isoform 1 [Vitis vinifera] Length = 198 Score = 89.4 bits (220), Expect = 9e-16 Identities = 47/83 (56%), Positives = 64/83 (77%), Gaps = 1/83 (1%) Frame = -3 Query: 562 EESEMDLAILLSNYPGVSDQSIVDVYFANAGDLEASLDMLKQLEF-PLEFDQCLPDTLDI 386 E+S+MDLA L + +PG+SDQS++DVY AN GDLEAS+DML QLEF P++ + LP++LDI Sbjct: 103 EDSQMDLAYLGTLFPGISDQSLLDVYTANGGDLEASIDMLNQLEFYPVDARRHLPESLDI 162 Query: 385 GDVADFGSSAEVTTVIPKAILGE 317 GDV+D SSAE ++ + GE Sbjct: 163 GDVSDVKSSAEGSSKLKGICPGE 185 >emb|CBI28118.3| unnamed protein product [Vitis vinifera] Length = 92 Score = 84.3 bits (207), Expect = 3e-14 Identities = 45/79 (56%), Positives = 60/79 (75%), Gaps = 1/79 (1%) Frame = -3 Query: 550 MDLAILLSNYPGVSDQSIVDVYFANAGDLEASLDMLKQLEF-PLEFDQCLPDTLDIGDVA 374 MDLA L + +PG+SDQS++DVY AN GDLEAS+DML QLEF P++ + LP++LDIGDV+ Sbjct: 1 MDLAYLGTLFPGISDQSLLDVYTANGGDLEASIDMLNQLEFYPVDARRHLPESLDIGDVS 60 Query: 373 DFGSSAEVTTVIPKAILGE 317 D SSAE ++ + GE Sbjct: 61 DVKSSAEGSSKLKGICPGE 79 >ref|XP_002516608.1| conserved hypothetical protein [Ricinus communis] gi|223544428|gb|EEF45949.1| conserved hypothetical protein [Ricinus communis] Length = 194 Score = 79.3 bits (194), Expect = 1e-12 Identities = 42/77 (54%), Positives = 55/77 (71%), Gaps = 1/77 (1%) Frame = -3 Query: 544 LAILLSNYPGVSDQSIVDVYFANAGDLEASLDMLKQLEF-PLEFDQCLPDTLDIGDVADF 368 L L +++PGVSD+S+ DVY AN DLEA++DML LEF E+ + LPDTLDIGDV++ Sbjct: 101 LEFLQASFPGVSDESLNDVYKANKCDLEATIDMLNHLEFDTFEYSENLPDTLDIGDVSEL 160 Query: 367 GSSAEVTTVIPKAILGE 317 GS AE +V K + GE Sbjct: 161 GSLAECASVKLKNVAGE 177 >ref|NP_001242337.1| uncharacterized protein LOC100781938 [Glycine max] gi|255640675|gb|ACU20622.1| unknown [Glycine max] Length = 212 Score = 79.0 bits (193), Expect = 1e-12 Identities = 45/90 (50%), Positives = 61/90 (67%), Gaps = 3/90 (3%) Frame = -3 Query: 577 NGNLSEESEMDLAILLSNYPGVSDQSIVDVYFANAGDLEASLDMLKQLEFPLEFDQ---C 407 N L EE +MDL L N+PG+S QS+VDVY N+GDL+A++DML QLE LE D+ Sbjct: 95 NQLLDEEVDMDLEYLRMNFPGISYQSLVDVYNVNSGDLDAAIDMLSQLE--LEGDETSGI 152 Query: 406 LPDTLDIGDVADFGSSAEVTTVIPKAILGE 317 LP+TLDIGDV++ G A+ ++ K + E Sbjct: 153 LPETLDIGDVSESGLPADSASLKQKNVAEE 182