BLASTX nr result

ID: Coptis23_contig00011964 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00011964
         (1241 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26400.3| unnamed protein product [Vitis vinifera]              157   4e-36
ref|XP_003633998.1| PREDICTED: uncharacterized protein LOC100855...   156   1e-35
ref|XP_002331419.1| predicted protein [Populus trichocarpa] gi|2...   103   7e-20
gb|AFK44423.1| unknown [Lotus japonicus]                              101   3e-19
gb|AFK39831.1| unknown [Lotus japonicus]                              101   3e-19

>emb|CBI26400.3| unnamed protein product [Vitis vinifera]
          Length = 326

 Score =  157 bits (398), Expect = 4e-36
 Identities = 109/304 (35%), Positives = 164/304 (53%), Gaps = 22/304 (7%)
 Frame = +1

Query: 166  FAYIFNSIHGSNISRRGGSFAASLPSHSSNPPRRHNRLPKHERRALVIAFVDKYRALNAG 345
            +A I N +H SNI R G S+A S+PS+     +   R+PK ER+ +V +FV+KYR +NAG
Sbjct: 26   YAEIINVVHKSNIRRHGRSYAVSVPSYVVKAQKSRKRVPKDERKVMVESFVNKYRGMNAG 85

Query: 346  KYPTASAAKKQVGGCFYVVKKIIQELEYNSKRSTPTKVNATPLEKEVPIKERPPFPEAIE 525
            K+PT S A+K VGG +Y+V++++QELE+ +K S  ++ N   +E E P KER    EA +
Sbjct: 86   KFPTVSEAQKHVGGSYYIVRELVQELEHKAKTSPLSRRNENLMENE-PAKERKSLAEAEK 144

Query: 526  VPSSIITADLISSE-------QSLELVDDSQPIVPSK--------IEMDVTTSNSFEVKE 660
            V +S  T D +  +         LE  D S   + +K        +  +VTTS+   VK 
Sbjct: 145  VSTSRRTVDAVIEDYRQTVPISPLEASDASSKNLEAKGGKWVEKILSEEVTTSSGV-VKG 203

Query: 661  ETINSSETPISEEYLNPKTIDGLSNRDQ-LQTNLESKESSHLFSKKP------EDSKEHA 819
            +T + S   + E+  N K  D   +R   ++T   + +     S +P         KE  
Sbjct: 204  KTKDISHAHL-EKLENGKIQDAQKDRSGFVETPSVTLKGETEGSSQPCLETIVGGKKEEV 262

Query: 820  AIFYDIDLNNQNVVQEAFKEASDSDDLERDISEKHKEENQLPKRSTMWGSLRSFADGIIN 999
            A    ++ +      E  + + + DD  RDIS K  EE +LPK ST+W +L+SFA GIIN
Sbjct: 263  ASESLLNFDGTKHEPEQNQGSPELDDFSRDISRKQNEE-ELPKGSTVWANLKSFAGGIIN 321

Query: 1000 LWRK 1011
            +WRK
Sbjct: 322  MWRK 325


>ref|XP_003633998.1| PREDICTED: uncharacterized protein LOC100855088 [Vitis vinifera]
          Length = 381

 Score =  156 bits (394), Expect = 1e-35
 Identities = 107/321 (33%), Positives = 163/321 (50%), Gaps = 39/321 (12%)
 Frame = +1

Query: 166  FAYIFNSIHGSNISRRGGSFAASLPSHSSNPPRRHNRLPKHERRALVIAFVDKYRALNAG 345
            +A I N +H SNI R G S+A S+PS+     +   R+PK ER+ +V +FV+KYR +NAG
Sbjct: 26   YAEIINVVHKSNIRRHGRSYAVSVPSYVVKAQKSRKRVPKDERKVMVESFVNKYRGMNAG 85

Query: 346  KYPTASAAKKQVGGCFYVVKKIIQELEYNSKRSTPTKVNATPLEKEVPIKERPPFPEAIE 525
            K+PT S A+K VGG +Y+V++++QELE+ +K S  ++ N   +E E P KER    EA +
Sbjct: 86   KFPTVSEAQKHVGGSYYIVRELVQELEHKAKTSPLSRRNENLMENE-PAKERKSLAEAEK 144

Query: 526  VPSSIITADLISSEQSLELVDDSQPIVP-SKIEMDVTTSNSFEVKE----ETINSSETPI 690
            V +S  T D +        ++D +  VP S +E    +S + E K     E I S E   
Sbjct: 145  VSTSRRTVDAV--------IEDYRQTVPISPLEASDASSKNLEAKGGKWVEKILSEEVTT 196

Query: 691  SEEY-----LNPKTIDGLSNRDQLQTNLESKESSHLFSKKPEDS---------------- 807
            S+++     +    + G   +D    +LE  E+  +   + + S                
Sbjct: 197  SDDHSDFVAMQSGVVKG-KTKDISHAHLEKLENGKIQDAQKDRSGFVETPSVTLKGETEG 255

Query: 808  -------------KEHAAIFYDIDLNNQNVVQEAFKEASDSDDLERDISEKHKEENQLPK 948
                         KE  A    ++ +      E  + + + DD  RDIS K  EE +LPK
Sbjct: 256  SSQPCLETIVGGKKEEVASESLLNFDGTKHEPEQNQGSPELDDFSRDISRKQNEE-ELPK 314

Query: 949  RSTMWGSLRSFADGIINLWRK 1011
             ST+W +L+SFA GIIN+WRK
Sbjct: 315  GSTVWANLKSFAGGIINMWRK 335


>ref|XP_002331419.1| predicted protein [Populus trichocarpa] gi|222873633|gb|EEF10764.1|
           predicted protein [Populus trichocarpa]
          Length = 192

 Score =  103 bits (258), Expect = 7e-20
 Identities = 52/113 (46%), Positives = 76/113 (67%)
 Frame = +1

Query: 166 FAYIFNSIHGSNISRRGGSFAASLPSHSSNPPRRHNRLPKHERRALVIAFVDKYRALNAG 345
           F  + N+IHG+N+  R  S+AAS+PSH     +   R+ K +RRA+V ++V+KYR  +AG
Sbjct: 19  FDEVANAIHGANMQWRARSYAASVPSHMPQSHKAQKRVSKDDRRAMVESYVNKYRETHAG 78

Query: 346 KYPTASAAKKQVGGCFYVVKKIIQELEYNSKRSTPTKVNATPLEKEVPIKERP 504
           K+P+ S A+KQVGG +Y ++KI+QELEY SK S+    N    +KE+PI   P
Sbjct: 79  KFPSISDARKQVGGNYYFIRKIVQELEYKSKISSSNSGNK---KKELPIVSEP 128


>gb|AFK44423.1| unknown [Lotus japonicus]
          Length = 217

 Score =  101 bits (252), Expect = 3e-19
 Identities = 67/180 (37%), Positives = 104/180 (57%), Gaps = 2/180 (1%)
 Frame = +1

Query: 175 IFNSIHGSNISRRGGSFAA--SLPSHSSNPPRRHNRLPKHERRALVIAFVDKYRALNAGK 348
           + +S+  SN+  RG S+AA  S PS      +   R+ K +RRA+V +FV+K+R+ NAGK
Sbjct: 29  VCDSVGPSNVKWRGLSYAAASSAPSEPPESQKGRKRVSKQQRRAIVESFVNKHRSENAGK 88

Query: 349 YPTASAAKKQVGGCFYVVKKIIQELEYNSKRSTPTKVNATPLEKEVPIKERPPFPEAIEV 528
           +PT +  +KQVGG FY +++II+ELEY SK  +    +   LEK +   +R    E  E 
Sbjct: 89  FPTITDIQKQVGGGFYSIREIIKELEYKSKMKSSNNEDEILLEKLIDKSKR----ETTE- 143

Query: 529 PSSIITADLISSEQSLELVDDSQPIVPSKIEMDVTTSNSFEVKEETINSSETPISEEYLN 708
            S I+++D I + +     DDS P++   I+   T S  +E  EE++++   P SE Y N
Sbjct: 144 -SVIVSSDNIETSREKPFQDDSLPVL---IDGKETVSTGYEHLEESLSA---PSSENYSN 196


>gb|AFK39831.1| unknown [Lotus japonicus]
          Length = 209

 Score =  101 bits (252), Expect = 3e-19
 Identities = 67/180 (37%), Positives = 104/180 (57%), Gaps = 2/180 (1%)
 Frame = +1

Query: 175 IFNSIHGSNISRRGGSFAA--SLPSHSSNPPRRHNRLPKHERRALVIAFVDKYRALNAGK 348
           + +S+  SN+  RG S+AA  S PS      +   R+ K +RRA+V +FV+K+R+ NAGK
Sbjct: 29  VCDSVGPSNVKWRGLSYAAASSAPSEPPESQKGRKRVSKQQRRAIVESFVNKHRSENAGK 88

Query: 349 YPTASAAKKQVGGCFYVVKKIIQELEYNSKRSTPTKVNATPLEKEVPIKERPPFPEAIEV 528
           +PT +  +KQVGG FY +++II+ELEY SK  +    +   LEK +   +R    E  E 
Sbjct: 89  FPTITDIQKQVGGGFYSIREIIKELEYKSKMKSSNNKDEILLEKLIDKSKR----ETTE- 143

Query: 529 PSSIITADLISSEQSLELVDDSQPIVPSKIEMDVTTSNSFEVKEETINSSETPISEEYLN 708
            S I+++D I + +     DDS P++   I+   T S  +E  EE++++   P SE Y N
Sbjct: 144 -SVIVSSDNIETSREKPFQDDSLPVL---IDGKETVSTGYEHLEESLSA---PSSENYSN 196


Top