BLASTX nr result
ID: Coptis23_contig00011959
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00011959
(1427 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002277256.1| PREDICTED: protein kinase 2B, chloroplastic ... 434 e-160
ref|XP_002520117.1| Protein kinase APK1A, chloroplast precursor,... 433 e-159
ref|XP_002315799.1| predicted protein [Populus trichocarpa] gi|2... 433 e-155
ref|XP_003519043.1| PREDICTED: LOW QUALITY PROTEIN: protein kina... 432 e-155
ref|XP_003517946.1| PREDICTED: LOW QUALITY PROTEIN: protein kina... 433 e-155
>ref|XP_002277256.1| PREDICTED: protein kinase 2B, chloroplastic [Vitis vinifera]
gi|296086406|emb|CBI31995.3| unnamed protein product
[Vitis vinifera]
Length = 420
Score = 434 bits (1117), Expect(3) = e-160
Identities = 218/284 (76%), Positives = 237/284 (83%), Gaps = 2/284 (0%)
Frame = -3
Query: 1395 MGNCMDSSARVDTAKSSSQHTNSGQSKPTGRXXXXXXXXXXXXXXXXXXXXXXXXXXXPR 1216
MGNC+DSSARVD+ +SS + SG SK + R
Sbjct: 1 MGNCLDSSARVDSTQSSHTTSASGASKVVSKTSNSSAPSTLTVPSYSERSTAESFPTP-R 59
Query: 1215 TEGEILSSPNLKAFTFSEMKNATRNFRPDSLLGEGGFGYVFKGWLDEQTLTAARPGSGMV 1036
+EGEIL SP+LKAF+F+++KNATRNFRPDSLLGEGGFGYVFKGW+DEQTL A +PGSGMV
Sbjct: 60 SEGEILPSPSLKAFSFNDLKNATRNFRPDSLLGEGGFGYVFKGWIDEQTLAAVKPGSGMV 119
Query: 1035 IAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLVGYCLEGENRLLVYEFMPKGSLENH 856
IAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKL+GYCLEGENRLLVYEFMPKGSLENH
Sbjct: 120 IAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLENH 179
Query: 855 LFRRGPQPLPWEIRIKVAIGAARGLFFLHDA--QVIYRDFKASNILLDSEYNAKLSDFGL 682
LFRRGPQPL W +RI+VAIGAARGL FLHDA QVIYRDFKASNILLD+E+NAKLSDFGL
Sbjct: 180 LFRRGPQPLSWAVRIRVAIGAARGLSFLHDAESQVIYRDFKASNILLDAEFNAKLSDFGL 239
Query: 681 AKAGPTGDNTHVSTQVMGTQGYAAPEYVATGRLSAKSDVYSFGV 550
AKAGPTGD THVSTQVMGT GYAAPEYVATGRL+AKSDVYSFGV
Sbjct: 240 AKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGV 283
Score = 129 bits (323), Expect(3) = e-160
Identities = 59/76 (77%), Positives = 69/76 (90%)
Frame = -1
Query: 449 RALDKSKIGIEQNLVDWAKPYLNDKRKLFRVMDSKLEGQYPQKGAYLAANLALQCITNEG 270
RA+DK+KIG+EQNLVDWAKPYL DKR+LFR+MD+KLEGQYPQKGA++AA LALQC+ E
Sbjct: 293 RAVDKTKIGVEQNLVDWAKPYLGDKRRLFRIMDTKLEGQYPQKGAFMAATLALQCLNTEA 352
Query: 269 KARPPMSEVLATLEQL 222
K RP MSEVLATLEQ+
Sbjct: 353 KVRPRMSEVLATLEQI 368
Score = 52.0 bits (123), Expect(3) = e-160
Identities = 23/38 (60%), Positives = 30/38 (78%)
Frame = -2
Query: 118 DQKRLSYPVRRSPMKNQPSPLNLTPGGSPLASYRRSPR 5
+Q +S PV++SP++ Q SPLNLTP SPL SYR+SPR
Sbjct: 381 EQHTVSIPVQKSPLRQQHSPLNLTPRASPLPSYRQSPR 418
>ref|XP_002520117.1| Protein kinase APK1A, chloroplast precursor, putative [Ricinus
communis] gi|223540609|gb|EEF42172.1| Protein kinase
APK1A, chloroplast precursor, putative [Ricinus communis]
Length = 419
Score = 433 bits (1113), Expect(3) = e-159
Identities = 221/285 (77%), Positives = 237/285 (83%), Gaps = 3/285 (1%)
Frame = -3
Query: 1395 MGNCMDSSA-RVDTAKSSSQHTNSGQSKPTGRXXXXXXXXXXXXXXXXXXXXXXXXXXXP 1219
MGNC+DSSA +VDT + S HT SG S+ + R
Sbjct: 1 MGNCLDSSAAKVDTTQGS--HTPSGASRISSRTSRSSVPSSLTIPSYSERSSSECLPTP- 57
Query: 1218 RTEGEILSSPNLKAFTFSEMKNATRNFRPDSLLGEGGFGYVFKGWLDEQTLTAARPGSGM 1039
RTEGEILSSPNLKAF F+E+KNATRNFRPDSLLGEGGFGYVFKGW+DE TL+AARPGSGM
Sbjct: 58 RTEGEILSSPNLKAFCFNELKNATRNFRPDSLLGEGGFGYVFKGWIDEHTLSAARPGSGM 117
Query: 1038 VIAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLVGYCLEGENRLLVYEFMPKGSLEN 859
V+AVKKLKPEGFQGHKEWLTEV YLGQLHHPNLVKL+GYCLEGENRLLVYEFMPKGSLEN
Sbjct: 118 VVAVKKLKPEGFQGHKEWLTEVRYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 177
Query: 858 HLFRRGPQPLPWEIRIKVAIGAARGLFFLHDA--QVIYRDFKASNILLDSEYNAKLSDFG 685
HLFRRGPQPL W +RIKVA+GAARGL FLHDA QVIYRDFKASNILLD+E+NAKLSDFG
Sbjct: 178 HLFRRGPQPLSWAVRIKVAVGAARGLSFLHDAKSQVIYRDFKASNILLDAEFNAKLSDFG 237
Query: 684 LAKAGPTGDNTHVSTQVMGTQGYAAPEYVATGRLSAKSDVYSFGV 550
LAK GPTGD THVSTQVMGT GYAAPEYVATGRL+AKSDVYSFGV
Sbjct: 238 LAKEGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGV 282
Score = 129 bits (324), Expect(3) = e-159
Identities = 60/76 (78%), Positives = 71/76 (93%)
Frame = -1
Query: 449 RALDKSKIGIEQNLVDWAKPYLNDKRKLFRVMDSKLEGQYPQKGAYLAANLALQCITNEG 270
RA+DK+K+GIEQNLVDWAKPYL+DKRKLFR+MD+KL GQYPQK A++AANLALQC++ E
Sbjct: 292 RAVDKTKVGIEQNLVDWAKPYLSDKRKLFRIMDTKLGGQYPQKSAHMAANLALQCLSTEA 351
Query: 269 KARPPMSEVLATLEQL 222
KARP MSEVLATLEQ+
Sbjct: 352 KARPRMSEVLATLEQI 367
Score = 50.8 bits (120), Expect(3) = e-159
Identities = 22/40 (55%), Positives = 28/40 (70%)
Frame = -2
Query: 124 HLDQKRLSYPVRRSPMKNQPSPLNLTPGGSPLASYRRSPR 5
H + + PVR+SPM+ SPLNLTP SPL S+R+SPR
Sbjct: 378 HSEHPSIQIPVRKSPMRQHHSPLNLTPSASPLPSHRQSPR 417
>ref|XP_002315799.1| predicted protein [Populus trichocarpa] gi|222864839|gb|EEF01970.1|
predicted protein [Populus trichocarpa]
Length = 417
Score = 433 bits (1113), Expect(3) = e-155
Identities = 222/285 (77%), Positives = 239/285 (83%), Gaps = 3/285 (1%)
Frame = -3
Query: 1395 MGNCMDSS-ARVDTAKSSSQHTNSGQSKPTGRXXXXXXXXXXXXXXXXXXXXXXXXXXXP 1219
MGNC+DSS A+VD+ +SS N G S+ + R
Sbjct: 1 MGNCLDSSSAKVDSTQSSH---NPGASRISSRTSHSSVPSSLTIPSYSGRSSECLPTP-- 55
Query: 1218 RTEGEILSSPNLKAFTFSEMKNATRNFRPDSLLGEGGFGYVFKGWLDEQTLTAARPGSGM 1039
R+EGEILSSPNLKAF+F+E+KNATRNFRPDSLLGEGGFGYVFKGW+DE TLTAA+PGSGM
Sbjct: 56 RSEGEILSSPNLKAFSFNELKNATRNFRPDSLLGEGGFGYVFKGWIDEHTLTAAKPGSGM 115
Query: 1038 VIAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLVGYCLEGENRLLVYEFMPKGSLEN 859
V+AVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKL+GYCLEGENRLLVYEFMPKGSLEN
Sbjct: 116 VVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPKGSLEN 175
Query: 858 HLFRRGPQPLPWEIRIKVAIGAARGLFFLHDA--QVIYRDFKASNILLDSEYNAKLSDFG 685
HLFRRGPQPL W IRIKVAIGAARGL FLHDA QVIYRDFKASNILLD+E+NAKLSDFG
Sbjct: 176 HLFRRGPQPLSWAIRIKVAIGAARGLSFLHDAKSQVIYRDFKASNILLDAEFNAKLSDFG 235
Query: 684 LAKAGPTGDNTHVSTQVMGTQGYAAPEYVATGRLSAKSDVYSFGV 550
LAKAGPTGD THVSTQVMGT GYAAPEYVATGRL+AKSDVYSFGV
Sbjct: 236 LAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGV 280
Score = 129 bits (324), Expect(3) = e-155
Identities = 59/76 (77%), Positives = 69/76 (90%)
Frame = -1
Query: 449 RALDKSKIGIEQNLVDWAKPYLNDKRKLFRVMDSKLEGQYPQKGAYLAANLALQCITNEG 270
RA+DKSK+G+EQNLVDW KPYL DKRKLFR+MD+KL GQYPQKGA++AANLALQC++ E
Sbjct: 290 RAVDKSKVGVEQNLVDWVKPYLGDKRKLFRIMDTKLGGQYPQKGAFMAANLALQCLSTEA 349
Query: 269 KARPPMSEVLATLEQL 222
K RP MSEVLATLEQ+
Sbjct: 350 KVRPRMSEVLATLEQI 365
Score = 37.7 bits (86), Expect(3) = e-155
Identities = 17/39 (43%), Positives = 26/39 (66%)
Frame = -2
Query: 121 LDQKRLSYPVRRSPMKNQPSPLNLTPGGSPLASYRRSPR 5
L+ + + PVR+SPM++ SP+ T SPL S+ +SPR
Sbjct: 377 LEHQTVQTPVRQSPMRHHRSPVIPTASASPLPSHHQSPR 415
>ref|XP_003519043.1| PREDICTED: LOW QUALITY PROTEIN: protein kinase 2B, chloroplastic-like
[Glycine max]
Length = 414
Score = 432 bits (1112), Expect(3) = e-155
Identities = 217/284 (76%), Positives = 239/284 (84%), Gaps = 2/284 (0%)
Frame = -3
Query: 1395 MGNCMDSSARVDTAKSSSQHTNSGQSKPTGRXXXXXXXXXXXXXXXXXXXXXXXXXXXPR 1216
MGNC+DSSA+VD A+SS + SG SK T PR
Sbjct: 1 MGNCLDSSAKVDAAQSSRSTSASGISKTT---------PSSLSIPSYSEKSNASSLPTPR 51
Query: 1215 TEGEILSSPNLKAFTFSEMKNATRNFRPDSLLGEGGFGYVFKGWLDEQTLTAARPGSGMV 1036
+EGEILSSPNLK FTF+E+KNATRNFRPDSLLGEGGFGYV+KGW+DE T TA++PGSGMV
Sbjct: 52 SEGEILSSPNLKPFTFNELKNATRNFRPDSLLGEGGFGYVYKGWIDEHTFTASKPGSGMV 111
Query: 1035 IAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLVGYCLEGENRLLVYEFMPKGSLENH 856
+AVK+LKPEGFQGHKEWLTEVNYLGQL+HPNLVKL+GYCLEGENRLLVYEFMPKGSLENH
Sbjct: 112 VAVKRLKPEGFQGHKEWLTEVNYLGQLYHPNLVKLIGYCLEGENRLLVYEFMPKGSLENH 171
Query: 855 LFRRGPQPLPWEIRIKVAIGAARGLFFLHDA--QVIYRDFKASNILLDSEYNAKLSDFGL 682
LFRRGPQPL W +R+KVAIGAARGL FLH+A QVIYRDFKASNILLD+E+N+KLSDFGL
Sbjct: 172 LFRRGPQPLSWSVRMKVAIGAARGLSFLHNAKSQVIYRDFKASNILLDAEFNSKLSDFGL 231
Query: 681 AKAGPTGDNTHVSTQVMGTQGYAAPEYVATGRLSAKSDVYSFGV 550
AKAGPTGD THVSTQVMGTQGYAAPEYVATGRL+AKSDVYSFGV
Sbjct: 232 AKAGPTGDRTHVSTQVMGTQGYAAPEYVATGRLTAKSDVYSFGV 275
Score = 126 bits (317), Expect(3) = e-155
Identities = 58/76 (76%), Positives = 70/76 (92%)
Frame = -1
Query: 449 RALDKSKIGIEQNLVDWAKPYLNDKRKLFRVMDSKLEGQYPQKGAYLAANLALQCITNEG 270
RA+DK+ G+EQNLVDWAKPYL+DKR+LFR+MD+KLEGQYPQKGA+ AA LALQC+ +E
Sbjct: 285 RAVDKTITGMEQNLVDWAKPYLSDKRRLFRIMDTKLEGQYPQKGAFTAATLALQCLNSEA 344
Query: 269 KARPPMSEVLATLEQL 222
KARPPM+EVLATLEQ+
Sbjct: 345 KARPPMTEVLATLEQI 360
Score = 38.9 bits (89), Expect(3) = e-155
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = -2
Query: 124 HLDQKRLSYPVRRSPMKNQPSPLNLTPGGSPL 29
H + RL PVR+SP +N+ SPLNLTP SPL
Sbjct: 371 HSEHHRLQTPVRKSPARNR-SPLNLTPTASPL 401
>ref|XP_003517946.1| PREDICTED: LOW QUALITY PROTEIN: protein kinase 2B, chloroplastic-like
[Glycine max]
Length = 422
Score = 433 bits (1113), Expect(3) = e-155
Identities = 217/284 (76%), Positives = 239/284 (84%), Gaps = 2/284 (0%)
Frame = -3
Query: 1395 MGNCMDSSARVDTAKSSSQHTNSGQSKPTGRXXXXXXXXXXXXXXXXXXXXXXXXXXXPR 1216
MGNC+DSSA+VD A+SS + SG SK T PR
Sbjct: 1 MGNCLDSSAKVDAAQSSKSTSASGISKTT---------PSSLSIPSYSEKSNASSLPTPR 51
Query: 1215 TEGEILSSPNLKAFTFSEMKNATRNFRPDSLLGEGGFGYVFKGWLDEQTLTAARPGSGMV 1036
+EGEILSSPNLK FTF+E+KNATRNFRPDSLLGEGGFGYV+KGW+DE T TA++PGSGMV
Sbjct: 52 SEGEILSSPNLKPFTFNELKNATRNFRPDSLLGEGGFGYVYKGWIDEHTFTASKPGSGMV 111
Query: 1035 IAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLVGYCLEGENRLLVYEFMPKGSLENH 856
+AVK+LKPEGFQGHKEWLTEVNYLGQL+HPNLVKL+GYCLEGENRLLVYEFMPKGSLENH
Sbjct: 112 VAVKRLKPEGFQGHKEWLTEVNYLGQLYHPNLVKLIGYCLEGENRLLVYEFMPKGSLENH 171
Query: 855 LFRRGPQPLPWEIRIKVAIGAARGLFFLHDA--QVIYRDFKASNILLDSEYNAKLSDFGL 682
LFRRGPQPL W +R+KVAIGAARGL FLH+A QVIYRDFKASNILLD+E+N+KLSDFGL
Sbjct: 172 LFRRGPQPLSWSVRMKVAIGAARGLSFLHNAKSQVIYRDFKASNILLDAEFNSKLSDFGL 231
Query: 681 AKAGPTGDNTHVSTQVMGTQGYAAPEYVATGRLSAKSDVYSFGV 550
AKAGPTGD THVSTQVMGTQGYAAPEYVATGRL+AKSDVYSFGV
Sbjct: 232 AKAGPTGDRTHVSTQVMGTQGYAAPEYVATGRLTAKSDVYSFGV 275
Score = 126 bits (317), Expect(3) = e-155
Identities = 58/76 (76%), Positives = 70/76 (92%)
Frame = -1
Query: 449 RALDKSKIGIEQNLVDWAKPYLNDKRKLFRVMDSKLEGQYPQKGAYLAANLALQCITNEG 270
RA+DK+ G+EQNLVDWAKPYL+DKR+LFR+MD+KLEGQYPQKGA+ AA LALQC+ +E
Sbjct: 285 RAVDKTITGMEQNLVDWAKPYLSDKRRLFRIMDTKLEGQYPQKGAFTAATLALQCLNSEA 344
Query: 269 KARPPMSEVLATLEQL 222
KARPPM+EVLATLEQ+
Sbjct: 345 KARPPMTEVLATLEQI 360
Score = 37.7 bits (86), Expect(3) = e-155
Identities = 18/32 (56%), Positives = 23/32 (71%)
Frame = -2
Query: 124 HLDQKRLSYPVRRSPMKNQPSPLNLTPGGSPL 29
H + R+ PVR+SP +N+ SPLNLTP SPL
Sbjct: 371 HSEHHRVQTPVRKSPARNR-SPLNLTPTASPL 401