BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00011949
         (1277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA95820.1| retrotransposon protein, putative, unclassified [...   249   2e-67
gb|AAT47077.1| putative polyprotein [Oryza sativa Japonica Group]     249   2e-67
emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]   245   2e-62
emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]   243   1e-61
emb|CAN74303.1| hypothetical protein VITISV_032980 [Vitis vinifera]   232   5e-61

>gb|ABA95820.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1142

 Score =  249 bits (636), Expect(2) = 2e-67
 Identities = 121/238 (50%), Positives = 171/238 (71%), Gaps = 4/238 (1%)
 Frame = -3

Query: 921  IYESCNVHVT*SQEGIFLSQEKYTDGLLKKFCMTNCKPIATSMMETEKFSKYDGATKADA 742
            +Y    + V  S EGIF+SQ KY + +LKKF M NCK + T ++  EK    DGA K D 
Sbjct: 862  LYYFLGMEVHQSDEGIFISQRKYAENILKKFKMDNCKSVTTPLLPNEKQKARDGADKVDP 921

Query: 741  SLYRSLVSSLIYLTDTRPNIVHAVSILSRFLNVPSNNHYDAAKRILRYVNSTKNCGLFYR 562
            ++YRSLV SL+YLT TRP+I+ A S+LSR+++ PS  ++ AAKR+LRY+  T + G++Y+
Sbjct: 922  TIYRSLVGSLLYLTATRPDIMFAASLLSRYMSSPSQLNFTAAKRVLRYIKGTADYGIWYK 981

Query: 561  KEEDNHLYGYTNNDWAWSIDDKKSTSRCVFCLGTKMITWSSKKQCIVALSSTEAEYISAT 382
              +++ L GYT++DWA  +DD K TS   F LG+ M +WS+KKQ IVALSS EAEY++A+
Sbjct: 982  PVKESKLIGYTDSDWAGCLDDMKGTSGYAFSLGSGMCSWSTKKQNIVALSSAEAEYVAAS 1041

Query: 381  SA----VWLCRILEDLQQKQEAPTTVFCDNMSTIAMTKNPVFHRRSKHIELRHHFIRE 220
             A    VWL RI+EDL +KQ  PTT++CD+ S IA+++NPV H R+KHI +++H+IRE
Sbjct: 1042 KAVSQVVWLRRIMEDLGEKQYQPTTIYCDSKSAIAISENPVSHDRTKHIAIKYHYIRE 1099



 Score = 34.7 bits (78), Expect(2) = 2e-67
 Identities = 14/26 (53%), Positives = 20/26 (76%)
 Frame = -1

Query: 203  DIDLQFCKIDEQLADGFTKVVPLKKF 126
            ++ L+FC+ DEQLAD FTK +  +KF
Sbjct: 1105 EVKLEFCRTDEQLADIFTKALSKEKF 1130


>gb|AAT47077.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1136

 Score =  249 bits (635), Expect(2) = 2e-67
 Identities = 121/227 (53%), Positives = 167/227 (73%), Gaps = 4/227 (1%)
 Frame = -3

Query: 888  SQEGIFLSQEKYTDGLLKKFCMTNCKPIATSMMETEKFSKYDGATKADASLYRSLVSSLI 709
            S EGIF+SQ KY + +LKKF M NCK + T ++  EK    DGA KAD ++YRSLV SL+
Sbjct: 867  SDEGIFISQRKYAENILKKFKMDNCKSVTTPLLPNEKQKARDGADKADPTIYRSLVGSLL 926

Query: 708  YLTDTRPNIVHAVSILSRFLNVPSNNHYDAAKRILRYVNSTKNCGLFYRKEEDNHLYGYT 529
            YLT TRP+I+ A S+LSR+++ PS  ++ AAKR+LRY+  T   G++Y+  +++ L GYT
Sbjct: 927  YLTATRPDIMFAASLLSRYMSSPSQLNFTAAKRVLRYIKGTAYYGIWYKPVKESKLIGYT 986

Query: 528  NNDWAWSIDDKKSTSRCVFCLGTKMITWSSKKQCIVALSSTEAEYISATSA----VWLCR 361
            ++DWA  +DD KSTS   F LG+ M +WS+KKQ IVALSS EAEY++A+ A    VWL R
Sbjct: 987  DSDWAGCLDDMKSTSGYAFSLGSGMWSWSTKKQNIVALSSAEAEYVAASKAVSQVVWLRR 1046

Query: 360  ILEDLQQKQEAPTTVFCDNMSTIAMTKNPVFHRRSKHIELRHHFIRE 220
            I+EDL +KQ  PTT++CD+ S IA+ +NPV H R+KHI +++H+IRE
Sbjct: 1047 IMEDLGEKQYQPTTIYCDSKSAIAINENPVSHDRTKHIAIKYHYIRE 1093



 Score = 34.7 bits (78), Expect(2) = 2e-67
 Identities = 14/26 (53%), Positives = 20/26 (76%)
 Frame = -1

Query: 203  DIDLQFCKIDEQLADGFTKVVPLKKF 126
            ++ L+FC+ DEQLAD FTK +  +KF
Sbjct: 1099 EVKLEFCRTDEQLADIFTKALSKEKF 1124


>emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]
          Length = 1274

 Score =  245 bits (625), Expect = 2e-62
 Identities = 119/227 (52%), Positives = 159/227 (70%), Gaps = 4/227 (1%)
 Frame = -3

Query: 885  QEGIFLSQEKYTDGLLKKFCMTNCKPIATSMMETEKFSKYDGATKADASLYRSLVSSLIY 706
            ++G+F+SQ KY   LLKKF M NCK +AT M   EK    DG  +ADA  +RSLV  LIY
Sbjct: 998  EDGVFVSQRKYAVDLLKKFNMLNCKVVATPMNSNEKLQAEDGTERADARRFRSLVGGLIY 1057

Query: 705  LTDTRPNIVHAVSILSRFLNVPSNNHYDAAKRILRYVNSTKNCGLFYRKEEDNHLYGYTN 526
            LT TRP+I  AV ++SRF++ PS  H  AAKR+LRY+  T + G++Y   ++  L GYT+
Sbjct: 1058 LTHTRPDIAFAVGVISRFMHCPSKQHLGAAKRLLRYIAGTYDFGIWYGHVQEFKLVGYTD 1117

Query: 525  NDWAWSIDDKKSTSRCVFCLGTKMITWSSKKQCIVALSSTEAEYISATS----AVWLCRI 358
            +DWA  ++D+KS S  +F LG+  + WSSKKQ + ALSS EAEY +ATS    AVWL RI
Sbjct: 1118 SDWAGCLEDRKSXSGYMFSLGSGAVCWSSKKQAVTALSSXEAEYTAATSSXCQAVWLRRI 1177

Query: 357  LEDLQQKQEAPTTVFCDNMSTIAMTKNPVFHRRSKHIELRHHFIREL 217
            L D+ Q+ E PT ++CDN + IAMTKNP +H R+KH+++R HFIR+L
Sbjct: 1178 LADINQEHEEPTVIYCDNKAAIAMTKNPAYHGRTKHVDIRVHFIRDL 1224


>emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]
          Length = 1472

 Score =  243 bits (619), Expect = 1e-61
 Identities = 118/227 (51%), Positives = 159/227 (70%), Gaps = 4/227 (1%)
 Frame = -3

Query: 885  QEGIFLSQEKYTDGLLKKFCMTNCKPIATSMMETEKFSKYDGATKADASLYRSLVSSLIY 706
            ++G+F+SQ KY   LLKKF M NCK +AT M   EK    DG  +ADA  + SLV  LIY
Sbjct: 987  EDGVFVSQRKYXVDLLKKFNMLNCKVVATXMNSNEKLQAEDGTERADARRFXSLVRGLIY 1046

Query: 705  LTDTRPNIVHAVSILSRFLNVPSNNHYDAAKRILRYVNSTKNCGLFYRKEEDNHLYGYTN 526
            LT TRP+I   V ++SRF++ PS  H  AAKR+LRY+  T + G++Y   ++  L GYT+
Sbjct: 1047 LTHTRPDIAFPVEVISRFMHCPSKQHLGAAKRLLRYIVGTYDFGIWYGHVQEFKLVGYTD 1106

Query: 525  NDWAWSIDDKKSTSRCVFCLGTKMITWSSKKQCIVALSSTEAEYISATS----AVWLCRI 358
            +DWA  ++D+KSTS  +F LG+  + WSSKKQ + ALSS+EAEY +ATS    AVWL RI
Sbjct: 1107 SDWAGCLEDRKSTSGYMFSLGSGAVCWSSKKQAVTALSSSEAEYTAATSSACQAVWLRRI 1166

Query: 357  LEDLQQKQEAPTTVFCDNMSTIAMTKNPVFHRRSKHIELRHHFIREL 217
            L D+ Q+ E PT ++CDN + IAMTKNP +H R+KH+++R HFIR+L
Sbjct: 1167 LADINQEHEEPTVIYCDNKAAIAMTKNPAYHGRTKHVDIRVHFIRDL 1213


>emb|CAN74303.1| hypothetical protein VITISV_032980 [Vitis vinifera]
          Length = 1283

 Score =  232 bits (592), Expect(2) = 5e-61
 Identities = 113/229 (49%), Positives = 166/229 (72%), Gaps = 4/229 (1%)
 Frame = -3

Query: 888  SQEGIFLSQEKYTDGLLKKFCMTNCKPIATSMMETEKFSKYDGATKADASLYRSLVSSLI 709
            S  GIF+SQ+KY   +L +F M +C P++T      K +K  G  K D  +Y+ +V SL+
Sbjct: 1010 SDTGIFISQKKYVREILNRFQMKDCNPVSTPTQFGLKLNKDHGGKKVDXIIYKQIVGSLM 1069

Query: 708  YLTDTRPNIVHAVSILSRFLNVPSNNHYDAAKRILRYVNSTKNCGLFYRKEEDNHLYGYT 529
            YLT TRP+I+H+VS++SR++  P+  H+ AAK+I RY+  TK+ GLFY+K + + L G+T
Sbjct: 1070 YLTATRPDIMHSVSLISRYMENPTELHFLAAKKICRYLQGTKDFGLFYKKGKRSDLIGFT 1129

Query: 528  NNDWAWSIDDKKSTSRCVFCLGTKMITWSSKKQCIVALSSTEAEYISATS----AVWLCR 361
            ++D+A   D+++STS  VF LGT  ++WSSKKQ IV LS+TEAE+++AT+    A+WL +
Sbjct: 1130 DSDYAGDQDNRRSTSGYVFMLGTGAVSWSSKKQPIVTLSTTEAEFVAATACACQAIWLRK 1189

Query: 360  ILEDLQQKQEAPTTVFCDNMSTIAMTKNPVFHRRSKHIELRHHFIRELS 214
            ILE+L  KQ   TT+FCDN STI ++KNPV H RSKHI+++++F+RELS
Sbjct: 1190 ILEELHLKQVGATTIFCDNSSTIKLSKNPVLHGRSKHIDVKYYFLRELS 1238



 Score = 30.0 bits (66), Expect(2) = 5e-61
 Identities = 14/29 (48%), Positives = 19/29 (65%)
 Frame = -1

Query: 206  GDIDLQFCKIDEQLADGFTKVVPLKKFKK 120
            G IDL +C+ + Q+AD FTK + L  F K
Sbjct: 1241 GVIDLVYCRSENQVADIFTKPLKLAAFLK 1269



 Score = 73.6 bits (179), Expect = 1e-10
 Identities = 34/78 (43%), Positives = 49/78 (62%)
 Frame = -3

Query: 1275 LVYSHTPSQYK*KFDEKGEKLIFIGYSAESKVYRLLNPKTNALVISRDVIFDELNA*KWE 1096
            + Y+H P Q + K D+KGEK IF+G S  SK Y+L NP T  + ISRD+IFDE +  KW+
Sbjct: 658  IAYAHIPXQKRKKLDDKGEKCIFLGVSEXSKAYKLYNPITKKIXISRDIIFDEGSFWKWD 717

Query: 1095 DGNQNTELPLVFEEDIEQ 1042
            D     ++   F+ + E+
Sbjct: 718  DNTTKQQIQABFDGENEE 735