BLASTX nr result

ID: Coptis23_contig00011948 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00011948
         (1388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280733.1| PREDICTED: uncharacterized protein LOC100255...   468   e-129
ref|XP_002299861.1| predicted protein [Populus trichocarpa] gi|2...   449   e-124
ref|XP_002534541.1| conserved hypothetical protein [Ricinus comm...   445   e-122
ref|XP_003545779.1| PREDICTED: uncharacterized protein LOC100814...   444   e-122
ref|XP_003531788.1| PREDICTED: uncharacterized protein LOC100781...   442   e-122

>ref|XP_002280733.1| PREDICTED: uncharacterized protein LOC100255385 [Vitis vinifera]
          Length = 396

 Score =  468 bits (1205), Expect = e-129
 Identities = 238/399 (59%), Positives = 278/399 (69%), Gaps = 28/399 (7%)
 Frame = +1

Query: 133  TSLFLHSPPIINPISLS---TRKCSLRHFVRHHNGHPNVASFNKLFSVSPSPHFF----- 288
            TS+FL+S   INP   S   T K S+R F +H     +V + N      PS  FF     
Sbjct: 4    TSVFLNSR--INPFGFSVANTFKPSIRPFNKHLQVQLHVNNSNLKTIKPPSKCFFRACPL 61

Query: 289  ---------------KCSYSSNTSSLPEFENPVTK-----TFTSVKEALKDSKLTPFDVC 408
                           KCSYS++TSS  E  NP  K     +F S+K  L  S+LTP D+C
Sbjct: 62   SSSPEIRRTHLLCPPKCSYSNSTSS--ESHNPFLKPLKNLSFDSLKATL--SQLTPIDIC 117

Query: 409  KWTGVFCVVIAAIKWAVGVFLNPFFWMYFSWTWLFWPYFLAIALGVYGIYGQRKHSVSEA 588
            KW+G+ CV IAA K  V + LNPFFWMYFSWTWLFWP+FLA+ + VYG+Y  R+H   EA
Sbjct: 118  KWSGILCVSIAATKRTVNLLLNPFFWMYFSWTWLFWPWFLAVGVAVYGLYCLRRHLCGEA 177

Query: 589  NVFEQLVIVTSAFTWLTLVPPAHFNGYLQGWPXXXXXXXXXXXXXXXSVRKRLYGDYYAR 768
            NVFEQ+ IVTS FTWLTLVPPAHFNG+L+GWP               SVRKRLYGDY+ R
Sbjct: 178  NVFEQIAIVTSVFTWLTLVPPAHFNGFLEGWPFVFFFVYHYFFFFNVSVRKRLYGDYFLR 237

Query: 769  DHDPKWDVKTSSFSRLLFCVGVMVGHWLAAFEGPELHLTPGGWSNVGILVLIMTTLFMQY 948
             HDPKWDV   ++ RLLFC+GVMVGHWLAA+EGPELHL PGGW+N+ +  LIM TLFMQY
Sbjct: 238  PHDPKWDVSPPNWHRLLFCIGVMVGHWLAAYEGPELHLIPGGWNNLWVWALIMVTLFMQY 297

Query: 949  HSTLYLAKYSEKVVVPTSVVQFGPYRWVRHPIYASVMLLFATYCIALRAPLSLLFXXXXX 1128
            HSTLYLAKYSEKVVVPT+VVQFGPYRWVRHPIYAS MLLF +YC+ALRAP+S LF     
Sbjct: 298  HSTLYLAKYSEKVVVPTAVVQFGPYRWVRHPIYASTMLLFVSYCLALRAPISSLFVIAVC 357

Query: 1129 XXYFEQKVKLEEHLMIETFGERYTEYMNKVRYKFIPFLY 1245
              Y+EQKVKLEE  M+ETFGE+Y EY NKV+YKFIPF+Y
Sbjct: 358  LMYYEQKVKLEEASMVETFGEKYMEYANKVKYKFIPFVY 396


>ref|XP_002299861.1| predicted protein [Populus trichocarpa] gi|222847119|gb|EEE84666.1|
            predicted protein [Populus trichocarpa]
          Length = 324

 Score =  449 bits (1155), Expect = e-124
 Identities = 213/322 (66%), Positives = 245/322 (76%), Gaps = 3/322 (0%)
 Frame = +1

Query: 289  KCSYSSNTSSLPEFENPVTKTFTSVK-EALKDS--KLTPFDVCKWTGVFCVVIAAIKWAV 459
            KCS+S + S+     +P  K F ++  + LK +  +LTP D+ KW+G+  + IAA KW V
Sbjct: 3    KCSHSGSASTDGSQNHPFLKPFKNLSLDELKATLLQLTPIDIIKWSGILSIAIAATKWTV 62

Query: 460  GVFLNPFFWMYFSWTWLFWPYFLAIALGVYGIYGQRKHSVSEANVFEQLVIVTSAFTWLT 639
             + LNPFFWMYFSWTWLFWP+F+AI L VYG+Y   KHS+ EA++FEQ  IVTS FTWLT
Sbjct: 63   NLVLNPFFWMYFSWTWLFWPWFVAILLAVYGLYCFYKHSIGEASIFEQFAIVTSVFTWLT 122

Query: 640  LVPPAHFNGYLQGWPXXXXXXXXXXXXXXXSVRKRLYGDYYARDHDPKWDVKTSSFSRLL 819
            LVPPAHFNGYLQGWP               SVRKRLYGDYYAR HDPKWD+    +SRLL
Sbjct: 123  LVPPAHFNGYLQGWPFVFFFVYHYFFFFNVSVRKRLYGDYYARPHDPKWDLHPPRWSRLL 182

Query: 820  FCVGVMVGHWLAAFEGPELHLTPGGWSNVGILVLIMTTLFMQYHSTLYLAKYSEKVVVPT 999
            FCVGVMVGHWLAA EGPELHL PGGWSNVGI +LI+ TL MQY+ST YLAKYSEKVVVP 
Sbjct: 183  FCVGVMVGHWLAALEGPELHLIPGGWSNVGIWILILATLLMQYNSTFYLAKYSEKVVVPI 242

Query: 1000 SVVQFGPYRWVRHPIYASVMLLFATYCIALRAPLSLLFXXXXXXXYFEQKVKLEEHLMIE 1179
            +VVQFGPYRWVRHPIY+S MLLFATY +ALRAPLSLLF       Y+ QK K+EE LMIE
Sbjct: 243  AVVQFGPYRWVRHPIYSSTMLLFATYFLALRAPLSLLFVVAVCLMYYAQKAKMEEDLMIE 302

Query: 1180 TFGERYTEYMNKVRYKFIPFLY 1245
            TFGE+Y EYM KVRYKFIP +Y
Sbjct: 303  TFGEKYLEYMGKVRYKFIPLVY 324


>ref|XP_002534541.1| conserved hypothetical protein [Ricinus communis]
            gi|223525079|gb|EEF27841.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 408

 Score =  445 bits (1145), Expect = e-122
 Identities = 231/389 (59%), Positives = 265/389 (68%), Gaps = 29/389 (7%)
 Frame = +1

Query: 166  NPISLSTRKCSLRHFVRHHNGHPNVASF-------------NKLFSVSP--SPHFF---- 288
            N I+ S  + SLRHF +H   H +  +F             N L S++   SP  F    
Sbjct: 22   NRINDSRNRVSLRHFNKHLQSHLSNTNFHCNRIRTPIRNPLNPLLSLNQTLSPLRFTKTH 81

Query: 289  -----KCSYSSNTSSLPEFENPVTK-----TFTSVKEALKDSKLTPFDVCKWTGVFCVVI 438
                 KCSYSS+ S+      P  K     +F  VK  L   +LTPFD+ KW+ VF V I
Sbjct: 82   LLSPVKCSYSSSASTGAPQNYPWLKPLKDLSFDEVKAILL--QLTPFDIIKWSAVFSVAI 139

Query: 439  AAIKWAVGVFLNPFFWMYFSWTWLFWPYFLAIALGVYGIYGQRKHSVSEANVFEQLVIVT 618
            A  KW+V + LNPFFWMYFSWTWLFWP+F+AI+L VYG+Y   KHS+  A++FEQ+ +VT
Sbjct: 140  AVTKWSVNLLLNPFFWMYFSWTWLFWPWFVAISLAVYGLYCFYKHSLGAASIFEQIALVT 199

Query: 619  SAFTWLTLVPPAHFNGYLQGWPXXXXXXXXXXXXXXXSVRKRLYGDYYARDHDPKWDVKT 798
            S FTWLTLVPPAHFNGYLQGWP               SVRKRLYGDY+AR HDPKWDV  
Sbjct: 200  SVFTWLTLVPPAHFNGYLQGWPFVFFFVYHYFFFFNVSVRKRLYGDYFARPHDPKWDVDA 259

Query: 799  SSFSRLLFCVGVMVGHWLAAFEGPELHLTPGGWSNVGILVLIMTTLFMQYHSTLYLAKYS 978
              + RLLFC GVMVGHWLAA EGPELHL  GGWSN GI VLI+ TL MQY+STL+LAKYS
Sbjct: 260  PKWHRLLFCAGVMVGHWLAALEGPELHLISGGWSNAGIWVLILVTLLMQYNSTLFLAKYS 319

Query: 979  EKVVVPTSVVQFGPYRWVRHPIYASVMLLFATYCIALRAPLSLLFXXXXXXXYFEQKVKL 1158
            EKVVVPT+VVQFGPYRWVRHPIY+S MLLFATY IALRA LSLLF       Y+ QK   
Sbjct: 320  EKVVVPTAVVQFGPYRWVRHPIYSSTMLLFATYFIALRARLSLLFVVAVCLIYYAQKAGK 379

Query: 1159 EEHLMIETFGERYTEYMNKVRYKFIPFLY 1245
            EE LMIETFGERY EY +KVRYKFIPF+Y
Sbjct: 380  EEALMIETFGERYLEYTSKVRYKFIPFVY 408


>ref|XP_003545779.1| PREDICTED: uncharacterized protein LOC100814215 [Glycine max]
          Length = 394

 Score =  444 bits (1141), Expect = e-122
 Identities = 222/382 (58%), Positives = 266/382 (69%), Gaps = 25/382 (6%)
 Frame = +1

Query: 175  SLSTRKCSLRHFVRHHNG-----HPNVASFN-----------------KLFSVSPSPHFF 288
            S+ + K SLR F +H +       P   SF                  K  +  PSP   
Sbjct: 18   SIVSNKVSLRPFDKHFHADVLANRPKSISFQLNCSYGNPFSSVLKPARKRANFLPSP--- 74

Query: 289  KCSYSSNTSSLPEFENPVTKTFTSVK-EALKDS--KLTPFDVCKWTGVFCVVIAAIKWAV 459
            +CS SS+ S+  E +NPV + F +V  +++K +  +LTP DV KW+G+ C++ AA KW +
Sbjct: 75   RCSISSSAST--ESQNPVLEFFRNVPFDSIKATLLQLTPIDVVKWSGILCIIAAATKWTM 132

Query: 460  GVFLNPFFWMYFSWTWLFWPYFLAIALGVYGIYGQRKHSVSEANVFEQLVIVTSAFTWLT 639
             +  +PFFWMYFSWTWLFWP+ +AI L VYG+Y  RKH  SEAN+FEQL IVTS FTWLT
Sbjct: 133  NMLFSPFFWMYFSWTWLFWPWMVAIGLAVYGLYCFRKHLHSEANIFEQLAIVTSVFTWLT 192

Query: 640  LVPPAHFNGYLQGWPXXXXXXXXXXXXXXXSVRKRLYGDYYARDHDPKWDVKTSSFSRLL 819
            LVPP HFNGYL+GWP               SVRKRLYGDY+A+ HDPKWDV    +SRLL
Sbjct: 193  LVPPGHFNGYLEGWPYVFFFVYHYFFFFNVSVRKRLYGDYFAQPHDPKWDVNLPMWSRLL 252

Query: 820  FCVGVMVGHWLAAFEGPELHLTPGGWSNVGILVLIMTTLFMQYHSTLYLAKYSEKVVVPT 999
            F  GVMVGHWLAAFEGPELHL PGGWSN+GI  LI+TTL MQY++TLYLAKYSE VV PT
Sbjct: 253  FSTGVMVGHWLAAFEGPELHLIPGGWSNLGIWALIITTLLMQYNATLYLAKYSENVVEPT 312

Query: 1000 SVVQFGPYRWVRHPIYASVMLLFATYCIALRAPLSLLFXXXXXXXYFEQKVKLEEHLMIE 1179
            SVVQFGPYRWVRHPIY+S MLLF TYCIALRAPLSLLF       Y++QK + EE LM+E
Sbjct: 313  SVVQFGPYRWVRHPIYSSTMLLFVTYCIALRAPLSLLFIVAVCLLYYKQKAEKEEDLMVE 372

Query: 1180 TFGERYTEYMNKVRYKFIPFLY 1245
            TFG+ YTEY +KV+YK IPF+Y
Sbjct: 373  TFGQSYTEYASKVKYKLIPFIY 394


>ref|XP_003531788.1| PREDICTED: uncharacterized protein LOC100781970 [Glycine max]
          Length = 394

 Score =  442 bits (1138), Expect = e-122
 Identities = 223/381 (58%), Positives = 262/381 (68%), Gaps = 24/381 (6%)
 Frame = +1

Query: 175  SLSTRKCSLRHFVRHHNG-----HPNVASF-------NKLFSVSPSP-------HFFKCS 297
            S+ + K SLR F +H +       P   SF       N   SVS          HF +CS
Sbjct: 18   SIVSNKVSLRPFNKHFHADVLANRPKNISFQLNCTFGNPSSSVSKPARKRADLLHFPRCS 77

Query: 298  YSSNTSSLPEFENPVTK-----TFTSVKEALKDSKLTPFDVCKWTGVFCVVIAAIKWAVG 462
             SSN S+  E +N V       +F S+K  L   +LTP DV KW+G+ C++ AA KW   
Sbjct: 78   ISSNAST--ESQNSVIDFFRNLSFDSIKATLL--QLTPIDVVKWSGILCIITAATKWTKN 133

Query: 463  VFLNPFFWMYFSWTWLFWPYFLAIALGVYGIYGQRKHSVSEANVFEQLVIVTSAFTWLTL 642
            +  +PFFWMYFSWTWLFWP+ +A+ L VYG+Y  RKH   EAN+FEQL IVTS FTWLTL
Sbjct: 134  MLFSPFFWMYFSWTWLFWPWMVAVVLAVYGLYCFRKHLHGEANIFEQLAIVTSVFTWLTL 193

Query: 643  VPPAHFNGYLQGWPXXXXXXXXXXXXXXXSVRKRLYGDYYARDHDPKWDVKTSSFSRLLF 822
            VPP HFNGYL+GWP               SVRKRLYGDY+AR HDPKWDV   ++SRLLF
Sbjct: 194  VPPGHFNGYLEGWPYVFFFVYHYFFFFNVSVRKRLYGDYFARPHDPKWDVNLPTWSRLLF 253

Query: 823  CVGVMVGHWLAAFEGPELHLTPGGWSNVGILVLIMTTLFMQYHSTLYLAKYSEKVVVPTS 1002
              GVMVGHWLAAFEGPELHL PGGWSN+GI  LI+TTL MQY++TLYLAKYSE VV PT+
Sbjct: 254  STGVMVGHWLAAFEGPELHLIPGGWSNLGIWALIITTLLMQYNATLYLAKYSENVVEPTA 313

Query: 1003 VVQFGPYRWVRHPIYASVMLLFATYCIALRAPLSLLFXXXXXXXYFEQKVKLEEHLMIET 1182
            VVQFGPYRWVRHPIY+S MLLF TYCIALRAPLSLLF       Y++QK + EE LM+ET
Sbjct: 314  VVQFGPYRWVRHPIYSSTMLLFVTYCIALRAPLSLLFILAVCLLYYKQKAEREEDLMVET 373

Query: 1183 FGERYTEYMNKVRYKFIPFLY 1245
            FG+ YTEY +KV+YK IPF+Y
Sbjct: 374  FGQSYTEYASKVKYKLIPFIY 394


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