BLASTX nr result

ID: Coptis23_contig00011934 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00011934
         (1449 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AET79382.1| spermidine synthase [Populus tomentosa]                528   e-147
gb|AEX20346.1| spermidine synthase [Medicago sativa]                  527   e-147
ref|XP_002315806.1| predicted protein [Populus trichocarpa] gi|2...   527   e-147
ref|XP_003552013.1| PREDICTED: spermidine synthase 2-like [Glyci...   526   e-147
ref|XP_003613246.1| Spermidine synthase [Medicago truncatula] gi...   526   e-147

>gb|AET79382.1| spermidine synthase [Populus tomentosa]
          Length = 335

 Score =  528 bits (1360), Expect = e-147
 Identities = 258/335 (77%), Positives = 296/335 (88%), Gaps = 2/335 (0%)
 Frame = +2

Query: 212  KKEFMAELAVKRTREEEEVENGVSATMEVENKE--SSNCMSSVIPGWFSEISPMWPGEAH 385
            ++  + +L VKR RE+EE  NG SA  E    E  S++C+SSVIPGWFSEISPMWPGEAH
Sbjct: 3    EESVVTDLPVKRPREDEE--NGASAATEAMETETNSNDCISSVIPGWFSEISPMWPGEAH 60

Query: 386  SLKVEKILFQQKSKYQDVMVFQSSTYGKVLILDGVIQVTERDECAYREMITHLPLCSIPN 565
            SLKVEKILFQ +S YQ+VMVFQSSTYGKVL+LDGVIQ+TERDECAY+EMITHLPLCSI N
Sbjct: 61   SLKVEKILFQGRSDYQNVMVFQSSTYGKVLVLDGVIQLTERDECAYQEMITHLPLCSIAN 120

Query: 566  PKKVLVIXXXXXXVLCEVSRHSCVEQIDICEIDAMVVDVSKQHFPDLAVGFQDPRVTLHI 745
            PKKVLVI      VL EV+RH+ V QIDICEID MVVDVSK+ FPD++VG++DPRVTLHI
Sbjct: 121  PKKVLVIGGGDGGVLREVARHASVVQIDICEIDKMVVDVSKKFFPDVSVGYEDPRVTLHI 180

Query: 746  GDGIAYLNAVPEGTYDAIIVDSSDPIGPAQEFFEKPFFQSVAKALRPGGVVCTQAESIWL 925
            GDG+A+L AVPEGTYDA+IVDSSDPIGPAQE FEKPFF+S+AKALRPGGVV TQAESIWL
Sbjct: 181  GDGVAFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFFESIAKALRPGGVVSTQAESIWL 240

Query: 926  HMHIIENIVANCRQIFKGSINYAWTTVPTYPSGVIGFMLCSTEGPAVDFKHPVNPLDENE 1105
            HM+IIE+IVANC QIFKGS+NYAWTTVPTYPSG+IGFMLCSTEGPAVDFKHPVNP+D N+
Sbjct: 241  HMNIIEDIVANCHQIFKGSVNYAWTTVPTYPSGMIGFMLCSTEGPAVDFKHPVNPIDSND 300

Query: 1106 DHSKAKGPLKFYNPEIHSAAFCLPSFAKKVINNQS 1210
              SK+K PLKFYN E+H+AAFCLPSFAKKVI++++
Sbjct: 301  SQSKSK-PLKFYNSELHTAAFCLPSFAKKVIDSKA 334


>gb|AEX20346.1| spermidine synthase [Medicago sativa]
          Length = 344

 Score =  527 bits (1358), Expect = e-147
 Identities = 261/328 (79%), Positives = 286/328 (87%), Gaps = 5/328 (1%)
 Frame = +2

Query: 230  ELAVKRTREEEEVE-----NGVSATMEVENKESSNCMSSVIPGWFSEISPMWPGEAHSLK 394
            +  +KR REEE+ E     NGVS T  V  +   N +SSVIPGWFSEISPMWPGEAHSLK
Sbjct: 15   DFPLKRQREEEKDEDQLPHNGVSET--VPKEPQPNGLSSVIPGWFSEISPMWPGEAHSLK 72

Query: 395  VEKILFQQKSKYQDVMVFQSSTYGKVLILDGVIQVTERDECAYREMITHLPLCSIPNPKK 574
            VEKILFQ KS YQDVMVFQS+TYGKVL+LDGVIQ+TERDECAY+EMITHLPLCSIPNPKK
Sbjct: 73   VEKILFQGKSDYQDVMVFQSATYGKVLVLDGVIQLTERDECAYQEMITHLPLCSIPNPKK 132

Query: 575  VLVIXXXXXXVLCEVSRHSCVEQIDICEIDAMVVDVSKQHFPDLAVGFQDPRVTLHIGDG 754
            VLVI      VL EVSRHS VE+IDICEID MVVDVSKQ FPD+AVGF+DPRVTL+IGDG
Sbjct: 133  VLVIGGGDGGVLREVSRHSSVEKIDICEIDKMVVDVSKQFFPDIAVGFEDPRVTLNIGDG 192

Query: 755  IAYLNAVPEGTYDAIIVDSSDPIGPAQEFFEKPFFQSVAKALRPGGVVCTQAESIWLHMH 934
            +A+L A PEGTYDA+IVDSSDPIGPAQE FEKPFF+SVA+ALRPGGVVCTQAESIWLHMH
Sbjct: 193  VAFLKAAPEGTYDAVIVDSSDPIGPAQELFEKPFFESVARALRPGGVVCTQAESIWLHMH 252

Query: 935  IIENIVANCRQIFKGSINYAWTTVPTYPSGVIGFMLCSTEGPAVDFKHPVNPLDENEDHS 1114
            IIE+IV NCRQ+FKGS+NYAWTTVPTYPSG+IGFMLCSTEGP+VDFKHPVNP+DEN D  
Sbjct: 253  IIEDIVVNCRQVFKGSVNYAWTTVPTYPSGMIGFMLCSTEGPSVDFKHPVNPIDEN-DSQ 311

Query: 1115 KAKGPLKFYNPEIHSAAFCLPSFAKKVI 1198
             A  PLKFYN EIHSAAFCLPSFAK+ I
Sbjct: 312  HAGRPLKFYNSEIHSAAFCLPSFAKRAI 339


>ref|XP_002315806.1| predicted protein [Populus trichocarpa] gi|222864846|gb|EEF01977.1|
            predicted protein [Populus trichocarpa]
          Length = 335

 Score =  527 bits (1358), Expect = e-147
 Identities = 260/335 (77%), Positives = 296/335 (88%), Gaps = 2/335 (0%)
 Frame = +2

Query: 212  KKEFMAELAVKRTREEEEVENGVSATMEVENKESSN--CMSSVIPGWFSEISPMWPGEAH 385
            ++  + +L VKR RE+EE  NG SA  E    E++N   +SSVI GWFSEISPMWPGEAH
Sbjct: 3    EESVVTDLPVKRPREDEE--NGASAATEAMETETNNNDYISSVITGWFSEISPMWPGEAH 60

Query: 386  SLKVEKILFQQKSKYQDVMVFQSSTYGKVLILDGVIQVTERDECAYREMITHLPLCSIPN 565
            SLKVEKILFQ KS YQ+VMVFQSSTYGKVL+LDGVIQ+TERDECAY+EMITHLPLCSI N
Sbjct: 61   SLKVEKILFQGKSDYQNVMVFQSSTYGKVLVLDGVIQLTERDECAYQEMITHLPLCSIAN 120

Query: 566  PKKVLVIXXXXXXVLCEVSRHSCVEQIDICEIDAMVVDVSKQHFPDLAVGFQDPRVTLHI 745
            PKKVLVI      VL EV+RHS VEQIDICEID MVVDVSK+ FPD++VG++DPRV+LHI
Sbjct: 121  PKKVLVIGGGDGGVLREVARHSSVEQIDICEIDKMVVDVSKKFFPDVSVGYEDPRVSLHI 180

Query: 746  GDGIAYLNAVPEGTYDAIIVDSSDPIGPAQEFFEKPFFQSVAKALRPGGVVCTQAESIWL 925
            GDG+A+L AVPEGTYDA+IVDSSDPIGPAQE FEKPFF+SVAKALRPGGVV TQAESIWL
Sbjct: 181  GDGVAFLKAVPEGTYDAVIVDSSDPIGPAQELFEKPFFESVAKALRPGGVVSTQAESIWL 240

Query: 926  HMHIIENIVANCRQIFKGSINYAWTTVPTYPSGVIGFMLCSTEGPAVDFKHPVNPLDENE 1105
            HM+IIE+IVANCRQIFKGS+NYAWTTVPTYPSG+IGFMLCSTEGPAVDFKHPVNP+D N+
Sbjct: 241  HMNIIEDIVANCRQIFKGSVNYAWTTVPTYPSGMIGFMLCSTEGPAVDFKHPVNPIDSND 300

Query: 1106 DHSKAKGPLKFYNPEIHSAAFCLPSFAKKVINNQS 1210
              SK+K PLKFYN E+H+AAFCLPSFAKKVI++++
Sbjct: 301  SQSKSK-PLKFYNSELHTAAFCLPSFAKKVIDSKA 334


>ref|XP_003552013.1| PREDICTED: spermidine synthase 2-like [Glycine max]
          Length = 335

 Score =  526 bits (1355), Expect = e-147
 Identities = 260/333 (78%), Positives = 292/333 (87%), Gaps = 2/333 (0%)
 Frame = +2

Query: 218  EFMAELAVKRTREEEEVENGVSATMEVENKES--SNCMSSVIPGWFSEISPMWPGEAHSL 391
            E + E  VKR R+++E EN VS +M+VE  +   SN +SSVIPGWFSEIS MWPGEAHSL
Sbjct: 4    ESVVESPVKRQRDDDE-ENEVSVSMDVEGGKDPLSNGLSSVIPGWFSEISSMWPGEAHSL 62

Query: 392  KVEKILFQQKSKYQDVMVFQSSTYGKVLILDGVIQVTERDECAYREMITHLPLCSIPNPK 571
            KVEKILFQ KS+YQ+VMVFQSSTYGKVL+LDGVIQ+TERDECAY+EMITHLPLCSIPNPK
Sbjct: 63   KVEKILFQGKSEYQNVMVFQSSTYGKVLVLDGVIQLTERDECAYQEMITHLPLCSIPNPK 122

Query: 572  KVLVIXXXXXXVLCEVSRHSCVEQIDICEIDAMVVDVSKQHFPDLAVGFQDPRVTLHIGD 751
            KVLVI      V+ EV+ HS VE+IDICEID MVVDVSKQ+FPD+AVG+ DPRVTLHIGD
Sbjct: 123  KVLVIGGGDGGVIREVAHHSSVEKIDICEIDKMVVDVSKQYFPDVAVGYDDPRVTLHIGD 182

Query: 752  GIAYLNAVPEGTYDAIIVDSSDPIGPAQEFFEKPFFQSVAKALRPGGVVCTQAESIWLHM 931
            G+A+L  VPEGTYDA+IVDSSDPIGPAQE FEKPFF SVAKALRPGGVVCTQAESIWLHM
Sbjct: 183  GVAFLKEVPEGTYDAVIVDSSDPIGPAQELFEKPFFSSVAKALRPGGVVCTQAESIWLHM 242

Query: 932  HIIENIVANCRQIFKGSINYAWTTVPTYPSGVIGFMLCSTEGPAVDFKHPVNPLDENEDH 1111
             IIE+IVANCRQIFKGS+NYAWTTVPTYPSG+IGFMLCSTEGP VDFKHPVNP+DENE  
Sbjct: 243  DIIEDIVANCRQIFKGSVNYAWTTVPTYPSGMIGFMLCSTEGPPVDFKHPVNPIDENES- 301

Query: 1112 SKAKGPLKFYNPEIHSAAFCLPSFAKKVINNQS 1210
             K+  PLKFYN EIH+AAFCLPSFAK+ I +++
Sbjct: 302  QKSVRPLKFYNSEIHTAAFCLPSFAKRKIGSKA 334


>ref|XP_003613246.1| Spermidine synthase [Medicago truncatula] gi|355514581|gb|AES96204.1|
            Spermidine synthase [Medicago truncatula]
          Length = 343

 Score =  526 bits (1354), Expect = e-147
 Identities = 259/331 (78%), Positives = 287/331 (86%), Gaps = 4/331 (1%)
 Frame = +2

Query: 230  ELAVKRTREEEEVE----NGVSATMEVENKESSNCMSSVIPGWFSEISPMWPGEAHSLKV 397
            +  +KR REEE+ +    NG S T  V      N +SSVIPGWFSEISPMWPGEAHSLKV
Sbjct: 15   DFPLKRQREEEDEDQLPHNGFSET--VPKDPQPNGLSSVIPGWFSEISPMWPGEAHSLKV 72

Query: 398  EKILFQQKSKYQDVMVFQSSTYGKVLILDGVIQVTERDECAYREMITHLPLCSIPNPKKV 577
            EKILFQ KS YQ+VMVFQS+TYGKVL+LDGVIQ+TERDECAY+EMITHLPLCSIPNPKKV
Sbjct: 73   EKILFQGKSDYQNVMVFQSATYGKVLVLDGVIQLTERDECAYQEMITHLPLCSIPNPKKV 132

Query: 578  LVIXXXXXXVLCEVSRHSCVEQIDICEIDAMVVDVSKQHFPDLAVGFQDPRVTLHIGDGI 757
            LVI      VL EVSRH+ VE+IDICEID MVVDVSKQ FPD+AVGF+DPRVTLHIGDG+
Sbjct: 133  LVIGGGDGGVLREVSRHASVEKIDICEIDKMVVDVSKQFFPDIAVGFEDPRVTLHIGDGV 192

Query: 758  AYLNAVPEGTYDAIIVDSSDPIGPAQEFFEKPFFQSVAKALRPGGVVCTQAESIWLHMHI 937
            A+L A PEGTYDA+IVDSSDPIGPAQE FEKPFF+SVA+ALRPGGVVCTQAESIWLHMHI
Sbjct: 193  AFLKAAPEGTYDAVIVDSSDPIGPAQELFEKPFFESVARALRPGGVVCTQAESIWLHMHI 252

Query: 938  IENIVANCRQIFKGSINYAWTTVPTYPSGVIGFMLCSTEGPAVDFKHPVNPLDENEDHSK 1117
            IE+IV NCRQ+FKGS+NYAWTTVPTYPSG+IGFMLCSTEGP+VDFKHPVNP+DEN D   
Sbjct: 253  IEDIVVNCRQVFKGSVNYAWTTVPTYPSGMIGFMLCSTEGPSVDFKHPVNPIDEN-DSQH 311

Query: 1118 AKGPLKFYNPEIHSAAFCLPSFAKKVINNQS 1210
            A  PLKFYN EIHSAAFCLPSFAK+ I ++S
Sbjct: 312  AGRPLKFYNSEIHSAAFCLPSFAKRAIASKS 342


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