BLASTX nr result
ID: Coptis23_contig00011933
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00011933
(1238 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002448970.1| hypothetical protein SORBIDRAFT_05g002670 [S... 335 e-108
ref|XP_002468690.1| hypothetical protein SORBIDRAFT_01g050336 [S... 336 e-106
ref|NP_001064280.2| Os10g0192300 [Oryza sativa Japonica Group] g... 325 e-106
gb|AAP52578.2| hypothetical protein LOC_Os10g11620 [Oryza sativa... 325 e-106
gb|AAN09850.1| putative helicase, 3'-partial [Oryza sativa Japon... 325 e-106
>ref|XP_002448970.1| hypothetical protein SORBIDRAFT_05g002670 [Sorghum bicolor]
gi|241934813|gb|EES07958.1| hypothetical protein
SORBIDRAFT_05g002670 [Sorghum bicolor]
Length = 1193
Score = 335 bits (860), Expect(2) = e-108
Identities = 162/334 (48%), Positives = 218/334 (65%), Gaps = 5/334 (1%)
Frame = +1
Query: 1 QYVVDNYVKISTQQLRYLRDHQDDIRADLYQGLQDSFNIGQTDTGNIGRRIVLPTSYTGS 180
Q+ VD Y+KI + +L Y+R+HQDDIRA+LYQGL DS + G+ T +G+R V+P+S+ G
Sbjct: 217 QFAVDTYIKIESSRLDYIRNHQDDIRANLYQGLVDSLHAGEGRTEAVGKRTVMPSSFIGG 276
Query: 181 PRDMHERYQDAMAIVQKFGKPDLFITITCNPNWPEIRRELLPGQVASDRPELTTRIFHSK 360
PRDM RY DAMA+V++FGKPD+F+T+TCNPNW EI+REL PGQ DRP+L R+F +K
Sbjct: 277 PRDMRRRYMDAMALVRRFGKPDIFLTMTCNPNWDEIKRELYPGQTPQDRPDLVVRVFRAK 336
Query: 361 CEELKKDLFKKHVLGKVLAHVHVIEFQKRGLPHAHFLLILDQSDKLRSPEHYDQVVRAEI 540
+ELK L KK++LGKV AHV+V+EFQKRGLPHAHFLLI+D+ K+ PE YD+++ AE+
Sbjct: 337 LQELKDRLLKKNILGKVRAHVYVVEFQKRGLPHAHFLLIMDRKYKITCPEQYDRLISAEL 396
Query: 541 PDPLLEPELHRIVLRHMIHGTCGALNPTCVC-MXXXXXXXXXXXXXXXXTLQGDDSYPIY 717
P+ P L+++V +HM+HG CG LN C C T+QG DSYP+Y
Sbjct: 397 PNKKKYPVLYKMVTKHMMHGPCGVLNRDCPCTKGRDSCKNRYPRPFCNVTIQGKDSYPVY 456
Query: 718 MRRNINQYLIHNIKGDFHVNDGWVVPYNPWLLKKYDCHINVEICXXXXXXXXXXXXXXXX 897
RR + +G +++ WVVPYNP+LL+ ++CHINVE C
Sbjct: 457 RRREDGRK--EKFRG-HELDNRWVVPYNPYLLRLFNCHINVEACGSIKAVKYLFKYIYKG 513
Query: 898 XDRVSLQV----SSSGAANEDEIKQFVDGRWICP 987
DR S+ V N DEIKQ+ D RW+ P
Sbjct: 514 HDRASVAVREADKEDSEGNIDEIKQYRDARWVTP 547
Score = 82.8 bits (203), Expect(2) = e-108
Identities = 38/80 (47%), Positives = 51/80 (63%)
Frame = +2
Query: 992 EAAWRIFKFPLNRMYPSVYALQIHLKNMHQVTFCAGQHVNELLTDSSTSRSMLTEFFKLN 1171
EA WRI+ F L+ YPSV +LQ+HL +MH V+F Q + +L +SMLT +F+ N
Sbjct: 549 EALWRIYGFDLSDRYPSVLSLQLHLPDMHMVSFHRRQGIQRVLDRPGADKSMLTAYFEKN 608
Query: 1172 SVDQQARQYLYREIPEHYTW 1231
D+ AR LYR+ PE YTW
Sbjct: 609 RTDETARGILYRDFPEFYTW 628
>ref|XP_002468690.1| hypothetical protein SORBIDRAFT_01g050336 [Sorghum bicolor]
gi|241922544|gb|EER95688.1| hypothetical protein
SORBIDRAFT_01g050336 [Sorghum bicolor]
Length = 1834
Score = 336 bits (862), Expect(2) = e-106
Identities = 162/334 (48%), Positives = 220/334 (65%), Gaps = 5/334 (1%)
Frame = +1
Query: 1 QYVVDNYVKISTQQLRYLRDHQDDIRADLYQGLQDSFNIGQTDTGNIGRRIVLPTSYTGS 180
Q+ VD Y+KI + +L Y+R++QD +RADLYQGL DS + G+ N+GRR VL +S+ G
Sbjct: 595 QFAVDTYIKIESSRLDYMRNNQDTLRADLYQGLVDSMHSGEGSAENVGRRTVLSSSFIGG 654
Query: 181 PRDMHERYQDAMAIVQKFGKPDLFITITCNPNWPEIRRELLPGQVASDRPELTTRIFHSK 360
PRDM RY DAMA+V+K+GKPD+F+T+TCNPNW EI+ EL PGQ DRP+L TR+F +K
Sbjct: 655 PRDMRRRYMDAMALVRKYGKPDIFLTMTCNPNWDEIKNELYPGQTPQDRPDLVTRVFRAK 714
Query: 361 CEELKKDLFKKHVLGKVLAHVHVIEFQKRGLPHAHFLLILDQSDKLRSPEHYDQVVRAEI 540
+ ++K L +K +LGKV A+V+V+EFQKRGLPHAHFLLI+++ KL PE YD ++ AE+
Sbjct: 715 LDAMRKMLMEKDILGKVKAYVYVVEFQKRGLPHAHFLLIMERKYKLTCPEQYDMIISAEL 774
Query: 541 PDPLLEPELHRIVLRHMIHGTCGALNPTCVC-MXXXXXXXXXXXXXXXXTLQGDDSYPIY 717
P+ PEL+++V +HM+HG CG LNP+C C T QG DSYPIY
Sbjct: 775 PNKKKYPELYKMVTKHMMHGPCGTLNPSCPCTAGRGSCKNRYPRPFCEATSQGKDSYPIY 834
Query: 718 MRRNINQYLIHNIKGDFHVNDGWVVPYNPWLLKKYDCHINVEICXXXXXXXXXXXXXXXX 897
RRN + L ++G + +++ WVVPYNP LL+ ++CHINVE C
Sbjct: 835 RRRNDGRML--KVRGHY-LDNQWVVPYNPCLLRTFNCHINVEACGSIKLVKYLFKYIYKG 891
Query: 898 XDRVSLQV----SSSGAANEDEIKQFVDGRWICP 987
DR S+ + G N DEIKQ+ D RW+ P
Sbjct: 892 HDRASVVMRETDKEDGKGNIDEIKQYRDARWVTP 925
Score = 77.8 bits (190), Expect(2) = e-106
Identities = 34/80 (42%), Positives = 50/80 (62%)
Frame = +2
Query: 992 EAAWRIFKFPLNRMYPSVYALQIHLKNMHQVTFCAGQHVNELLTDSSTSRSMLTEFFKLN 1171
EA WRI+ F L++ +P V LQ+HL +MH V F V +++ SMLT +F N
Sbjct: 927 EALWRIYGFDLSKNHPPVQQLQLHLPDMHMVAFHKRDKVEKIVNRPGVEESMLTAYFDAN 986
Query: 1172 SVDQQARQYLYREIPEHYTW 1231
D++AR+ LYR+ PE++TW
Sbjct: 987 KHDEEARKILYRDFPEYFTW 1006
>ref|NP_001064280.2| Os10g0192300 [Oryza sativa Japonica Group]
gi|255679265|dbj|BAF26194.2| Os10g0192300 [Oryza sativa
Japonica Group]
Length = 1575
Score = 325 bits (834), Expect(2) = e-106
Identities = 155/330 (46%), Positives = 216/330 (65%), Gaps = 1/330 (0%)
Frame = +1
Query: 1 QYVVDNYVKISTQQLRYLRDHQDDIRADLYQGLQDSFNIGQTDTGNIGRRIVLPTSYTGS 180
Q+ VD Y+K+ + +L ++R HQ +IRADLY+G+ DS + G++ +G+R VLP S+ G
Sbjct: 535 QFAVDMYIKVESTRLDFIRRHQVEIRADLYKGVVDSIHAGESRASQVGKRTVLPASFIGG 594
Query: 181 PRDMHERYQDAMAIVQKFGKPDLFITITCNPNWPEIRRELLPGQVASDRPELTTRIFHSK 360
RDM RY DAMA+VQK+GKPD+F+T+TCNPNW EI L PGQ DRP+L R+F +K
Sbjct: 595 NRDMKRRYMDAMALVQKYGKPDIFLTMTCNPNWEEIIGNLEPGQTPQDRPDLIVRVFRAK 654
Query: 361 CEELKKDLFKKHVLGKVLAHVHVIEFQKRGLPHAHFLLILDQSDKLRSPEHYDQVVRAEI 540
E+LKK L +KH+LGKV+A+ +V+EFQKRGLPHAHFLLI+D KL SPE YD ++ AE+
Sbjct: 655 LEDLKKQLLEKHILGKVIAYAYVVEFQKRGLPHAHFLLIMDGKYKLTSPEQYDCIISAEL 714
Query: 541 PDPLLEPELHRIVLRHMIHGTCGALNPTCVCMXXXXXXXXXXXXXXXXTLQGDDSYPIYM 720
P+ PEL+ +V++HM+HG CG LN VCM T+ G DSYP+Y
Sbjct: 715 PNKHKYPELYEMVVKHMMHGPCGTLNRKNVCMQDGSCKNRYPRAFNAVTINGKDSYPVYR 774
Query: 721 RRNINQYLIHNIKGDFHVNDGWVVPYNPWLLKKYDCHINVEICXXXXXXXXXXXXXXXXX 900
RR+ + ++ +++ WVVPYNP+LL+ Y+CHINVE+C
Sbjct: 775 RRDNKR--CAKVRKQM-LDNRWVVPYNPYLLRMYNCHINVEVCSSIKAVKYLFKYIYKGH 831
Query: 901 DRVSLQVSSSGA-ANEDEIKQFVDGRWICP 987
DR S+ + + + N DEI+Q+ D RW+ P
Sbjct: 832 DRASVTLGEADSNGNIDEIQQYRDARWVTP 861
Score = 88.2 bits (217), Expect(2) = e-106
Identities = 37/80 (46%), Positives = 58/80 (72%)
Frame = +2
Query: 992 EAAWRIFKFPLNRMYPSVYALQIHLKNMHQVTFCAGQHVNELLTDSSTSRSMLTEFFKLN 1171
EA WRI+ F L++++P V LQ+HL NMH V+F AGQ +++++ + +SMLTE+F+ N
Sbjct: 863 EALWRIYSFDLSKVHPPVKQLQLHLPNMHMVSFRAGQDLHDVVERNGVEKSMLTEYFEAN 922
Query: 1172 SVDQQARQYLYREIPEHYTW 1231
V++ AR LY++ PE +TW
Sbjct: 923 KVNEDARGILYKDFPEAFTW 942
>gb|AAP52578.2| hypothetical protein LOC_Os10g11620 [Oryza sativa Japonica Group]
Length = 1416
Score = 325 bits (834), Expect(2) = e-106
Identities = 155/330 (46%), Positives = 216/330 (65%), Gaps = 1/330 (0%)
Frame = +1
Query: 1 QYVVDNYVKISTQQLRYLRDHQDDIRADLYQGLQDSFNIGQTDTGNIGRRIVLPTSYTGS 180
Q+ VD Y+K+ + +L ++R HQ +IRADLY+G+ DS + G++ +G+R VLP S+ G
Sbjct: 376 QFAVDMYIKVESTRLDFIRRHQVEIRADLYKGVVDSIHAGESRASQVGKRTVLPASFIGG 435
Query: 181 PRDMHERYQDAMAIVQKFGKPDLFITITCNPNWPEIRRELLPGQVASDRPELTTRIFHSK 360
RDM RY DAMA+VQK+GKPD+F+T+TCNPNW EI L PGQ DRP+L R+F +K
Sbjct: 436 NRDMKRRYMDAMALVQKYGKPDIFLTMTCNPNWEEIIGNLEPGQTPQDRPDLIVRVFRAK 495
Query: 361 CEELKKDLFKKHVLGKVLAHVHVIEFQKRGLPHAHFLLILDQSDKLRSPEHYDQVVRAEI 540
E+LKK L +KH+LGKV+A+ +V+EFQKRGLPHAHFLLI+D KL SPE YD ++ AE+
Sbjct: 496 LEDLKKQLLEKHILGKVIAYAYVVEFQKRGLPHAHFLLIMDGKYKLTSPEQYDCIISAEL 555
Query: 541 PDPLLEPELHRIVLRHMIHGTCGALNPTCVCMXXXXXXXXXXXXXXXXTLQGDDSYPIYM 720
P+ PEL+ +V++HM+HG CG LN VCM T+ G DSYP+Y
Sbjct: 556 PNKHKYPELYEMVVKHMMHGPCGTLNRKNVCMQDGSCKNRYPRAFNAVTINGKDSYPVYR 615
Query: 721 RRNINQYLIHNIKGDFHVNDGWVVPYNPWLLKKYDCHINVEICXXXXXXXXXXXXXXXXX 900
RR+ + ++ +++ WVVPYNP+LL+ Y+CHINVE+C
Sbjct: 616 RRDNKR--CAKVRKQM-LDNRWVVPYNPYLLRMYNCHINVEVCSSIKAVKYLFKYIYKGH 672
Query: 901 DRVSLQVSSSGA-ANEDEIKQFVDGRWICP 987
DR S+ + + + N DEI+Q+ D RW+ P
Sbjct: 673 DRASVTLGEADSNGNIDEIQQYRDARWVTP 702
Score = 88.2 bits (217), Expect(2) = e-106
Identities = 37/80 (46%), Positives = 58/80 (72%)
Frame = +2
Query: 992 EAAWRIFKFPLNRMYPSVYALQIHLKNMHQVTFCAGQHVNELLTDSSTSRSMLTEFFKLN 1171
EA WRI+ F L++++P V LQ+HL NMH V+F AGQ +++++ + +SMLTE+F+ N
Sbjct: 704 EALWRIYSFDLSKVHPPVKQLQLHLPNMHMVSFRAGQDLHDVVERNGVEKSMLTEYFEAN 763
Query: 1172 SVDQQARQYLYREIPEHYTW 1231
V++ AR LY++ PE +TW
Sbjct: 764 KVNEDARGILYKDFPEAFTW 783
>gb|AAN09850.1| putative helicase, 3'-partial [Oryza sativa Japonica Group]
Length = 1415
Score = 325 bits (834), Expect(2) = e-106
Identities = 155/330 (46%), Positives = 216/330 (65%), Gaps = 1/330 (0%)
Frame = +1
Query: 1 QYVVDNYVKISTQQLRYLRDHQDDIRADLYQGLQDSFNIGQTDTGNIGRRIVLPTSYTGS 180
Q+ VD Y+K+ + +L ++R HQ +IRADLY+G+ DS + G++ +G+R VLP S+ G
Sbjct: 376 QFAVDMYIKVESTRLDFIRRHQVEIRADLYKGVVDSIHAGESRASQVGKRTVLPASFIGG 435
Query: 181 PRDMHERYQDAMAIVQKFGKPDLFITITCNPNWPEIRRELLPGQVASDRPELTTRIFHSK 360
RDM RY DAMA+VQK+GKPD+F+T+TCNPNW EI L PGQ DRP+L R+F +K
Sbjct: 436 NRDMKRRYMDAMALVQKYGKPDIFLTMTCNPNWEEIIGNLEPGQTPQDRPDLIVRVFRAK 495
Query: 361 CEELKKDLFKKHVLGKVLAHVHVIEFQKRGLPHAHFLLILDQSDKLRSPEHYDQVVRAEI 540
E+LKK L +KH+LGKV+A+ +V+EFQKRGLPHAHFLLI+D KL SPE YD ++ AE+
Sbjct: 496 LEDLKKQLLEKHILGKVIAYAYVVEFQKRGLPHAHFLLIMDGKYKLTSPEQYDCIISAEL 555
Query: 541 PDPLLEPELHRIVLRHMIHGTCGALNPTCVCMXXXXXXXXXXXXXXXXTLQGDDSYPIYM 720
P+ PEL+ +V++HM+HG CG LN VCM T+ G DSYP+Y
Sbjct: 556 PNKHKYPELYEMVVKHMMHGPCGTLNRKNVCMQDGSCKNRYPRAFNAVTINGKDSYPVYR 615
Query: 721 RRNINQYLIHNIKGDFHVNDGWVVPYNPWLLKKYDCHINVEICXXXXXXXXXXXXXXXXX 900
RR+ + ++ +++ WVVPYNP+LL+ Y+CHINVE+C
Sbjct: 616 RRDNKR--CAKVRKQM-LDNRWVVPYNPYLLRMYNCHINVEVCSSIKAVKYLFKYIYKGH 672
Query: 901 DRVSLQVSSSGA-ANEDEIKQFVDGRWICP 987
DR S+ + + + N DEI+Q+ D RW+ P
Sbjct: 673 DRASVTLGEADSNGNIDEIQQYRDARWVTP 702
Score = 88.2 bits (217), Expect(2) = e-106
Identities = 37/80 (46%), Positives = 58/80 (72%)
Frame = +2
Query: 992 EAAWRIFKFPLNRMYPSVYALQIHLKNMHQVTFCAGQHVNELLTDSSTSRSMLTEFFKLN 1171
EA WRI+ F L++++P V LQ+HL NMH V+F AGQ +++++ + +SMLTE+F+ N
Sbjct: 704 EALWRIYSFDLSKVHPPVKQLQLHLPNMHMVSFRAGQDLHDVVERNGVEKSMLTEYFEAN 763
Query: 1172 SVDQQARQYLYREIPEHYTW 1231
V++ AR LY++ PE +TW
Sbjct: 764 KVNEDARGILYKDFPEAFTW 783