BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00011925
         (1123 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74990.1| hypothetical protein VITISV_008657 [Vitis vinifera]   117   7e-24
ref|XP_002278531.2| PREDICTED: putative nuclear matrix constitue...   113   8e-23
ref|XP_003552637.1| PREDICTED: putative nuclear matrix constitue...   100   7e-19
ref|XP_003531909.1| PREDICTED: putative nuclear matrix constitue...    99   1e-18
ref|XP_003531908.1| PREDICTED: putative nuclear matrix constitue...    99   1e-18

>emb|CAN74990.1| hypothetical protein VITISV_008657 [Vitis vinifera]
          Length = 1140

 Score =  117 bits (292), Expect = 7e-24
 Identities = 95/252 (37%), Positives = 134/252 (53%), Gaps = 4/252 (1%)
 Frame = +2

Query: 8    SGGRDFSLHKCTPKILSSSPLRRIEDSVAQGEAKELPLFNVQHNLETVK--GYCENEAGP 181
            SGG    L KCT KI + SP ++IE +  Q    E P  + Q  +E  K  G  E+E  P
Sbjct: 796  SGGTISFLRKCTSKIFNLSPGKKIEVAAIQN-LTEAPEPSRQAIVEPSKRLGSTEDEPEP 854

Query: 182  SSRIPRISLDVQKVRWADNNRVIEGQCSPSGNEHSKMDLKVPEVPEVSMNSQ-SSAQGKH 358
            S RI   S DVQ+++  ++ + +E     S +E S +D K  E+ + S +S    A+ K 
Sbjct: 855  SFRIANDSFDVQRIQSDNSIKEVEAGQDLSIDE-SNIDSKALELQQHSQHSDLKGARRKP 913

Query: 359  GTYQRRRIRGTNSVEAVVEDAKKVMGGENPELTEGKQPSGPTVVSAGVSGASRGDSFLVD 538
            G   ++RI  T SV+AVV DAK ++ GE+ EL+E + P+G    SA ++  SRG+S   D
Sbjct: 914  GKRSKQRIHRTRSVKAVVRDAKAIL-GESLELSENEHPNGNPEDSAHMNDESRGESSFAD 972

Query: 539  E-EPASVSLKPHSYASEITTSEQDLDGSEAHSKSVRGATGSRKRRQTANQGSQVPVENRY 715
            +  P +   +  +Y S+   SEQD D SE  S SV  A    KRRQ      Q   + RY
Sbjct: 973  KGTPRNGRKRQRAYTSQTMVSEQDGDDSEGRSDSVM-ARRQGKRRQKVPPAVQTLGQERY 1031

Query: 716  NLRRRKT*VTTS 751
            NLRR K  VT +
Sbjct: 1032 NLRRPKNTVTVA 1043


>ref|XP_002278531.2| PREDICTED: putative nuclear matrix constituent protein 1-like
            protein-like [Vitis vinifera]
          Length = 1213

 Score =  113 bits (283), Expect = 8e-23
 Identities = 94/258 (36%), Positives = 126/258 (48%), Gaps = 13/258 (5%)
 Frame = +2

Query: 2    SASGGRDFSLHKCTPKILSSSPLRRIEDSVAQGEAKELPLFNVQHNLETVKG-------Y 160
            S SGGR   L KC  KI + SP ++ E    Q   +E PL ++Q NLE  +G        
Sbjct: 814  SGSGGRMSFLRKCATKIFNLSPSKKSEHVGVQVLREESPLLDLQVNLEKAEGPSIVGQSI 873

Query: 161  CENEAGPSSRIPRISLDVQKVRWADNNRVIEGQCSPSGNEHSKMDLKVPEVPEVSMNSQ- 337
             E+E  PS  I   S D+Q++      R ++G  + S +  S M  K  E PE S  S+ 
Sbjct: 874  AEDELEPSFGIANDSFDIQQLHSDSVMREVDGGHAQSVDGVSNMGSKEQEGPEDSQQSEL 933

Query: 338  SSAQGKHGTYQRRRIRGTNSVEAVVEDAKKVMG--GENPELTEGKQPSGPTVVSAGVSGA 511
             S + K G  +R  +  T SV+ VVEDAK  +G   E PEL   ++P+  T  +      
Sbjct: 934  KSGRRKPGRKRRTGVHRTRSVKNVVEDAKAFLGETPEIPELNGDERPNDSTYTN------ 987

Query: 512  SRGDSFLVDEEPASVSL---KPHSYASEITTSEQDLDGSEAHSKSVRGATGSRKRRQTAN 682
              G+      E A+ ++   +  + +S IT SEQD   SE  S SV  A G  KRRQT  
Sbjct: 988  EEGERETSHAEKAASTITRKRQRAPSSRITESEQDAADSEGRSDSVT-AGGRGKRRQTVA 1046

Query: 683  QGSQVPVENRYNLRRRKT 736
               Q P E RYNLRR KT
Sbjct: 1047 PVVQTPGEKRYNLRRHKT 1064


>ref|XP_003552637.1| PREDICTED: putative nuclear matrix constituent protein 1-like
            protein-like [Glycine max]
          Length = 1191

 Score =  100 bits (249), Expect = 7e-19
 Identities = 86/263 (32%), Positives = 133/263 (50%), Gaps = 15/263 (5%)
 Frame = +2

Query: 8    SGGRDFSLHKCTPKILSSSPLRRIEDSVAQGEAKELPLFNVQH-NLETVKGY---CENEA 175
            SGG    L KCT KI   SP+R+IE S   G  +++   +V+  N+E   G     ENEA
Sbjct: 803  SGGTVSWLRKCTSKIFKISPIRKIE-SEDSGTLRDVVTLSVEKTNVEDSPGRIPDAENEA 861

Query: 176  GPSSRIPRISLDVQKVRWADNNRVIEGQCSPSGNEHSKMDLKVPE---VPEVSMNSQSSA 346
              S  +   S DVQ+V+  ++   +E    PS    + +D K PE    P+  +  Q S 
Sbjct: 862  ELSFAVVNDSFDVQRVQSGNDIVEVEADHEPSVENLNNVDSKAPEDLQAPDSKVGQQKSR 921

Query: 347  QGKHGTYQRRRIRGTNSVEAVVEDAKKVMG-------GENPELTEGKQPSGPTVVSAGVS 505
            +G      R R++ T++V+AV+++A+ ++G       GE+ +  E + P+G    SA V+
Sbjct: 922  KGGG----RPRVKRTHTVKAVIKEARGILGESAEALPGESVDDHENEFPNGNAEDSANVN 977

Query: 506  GASRGDSFLVDEEPASVSLKPH-SYASEITTSEQDLDGSEAHSKSVRGATGSRKRRQTAN 682
              S+  S      PA+V  +     +S++T S    D SE HS S+      R+R++ A 
Sbjct: 978  SESQKPSNR--RIPANVRKRNRVQTSSQMTVSGHGGDASEGHSDSLIPGQRKRRRQKAAA 1035

Query: 683  QGSQVPVENRYNLRRRKT*VTTS 751
              +Q   E+RYNLRR K   TTS
Sbjct: 1036 PPAQTAGESRYNLRRPKIGATTS 1058


>ref|XP_003531909.1| PREDICTED: putative nuclear matrix constituent protein 1-like
            protein-like isoform 2 [Glycine max]
          Length = 1190

 Score = 99.4 bits (246), Expect = 1e-18
 Identities = 85/263 (32%), Positives = 133/263 (50%), Gaps = 15/263 (5%)
 Frame = +2

Query: 8    SGGRDFSLHKCTPKILSSSPLRRIEDSVAQGEAKELPLFNV-QHNLETVKGY---CENEA 175
            SGG    L KCT KI   SP+R+IE S   G  +++   +V Q N+E   G     ENEA
Sbjct: 802  SGGTVSWLRKCTSKIFKISPIRKIE-SEDSGTLRDVVTLSVEQTNVEDSPGRIPDAENEA 860

Query: 176  GPSSRIPRISLDVQKVRWADNNRVIEGQCSPSGNEHSKMDLKVPE---VPEVSMNSQSSA 346
              S  +   S D ++V+  ++   +E    PS    + +D K PE    P+  +  Q S 
Sbjct: 861  ELSFAVVNDSFDARRVQSGNDIIEVEADHDPSVENLNNVDSKAPEDLQAPDSKVGQQKSR 920

Query: 347  QGKHGTYQRRRIRGTNSVEAVVEDAKKVMG-------GENPELTEGKQPSGPTVVSAGVS 505
            +G      R R++ T++V+AV+++A+ ++G       GE+ +  E + P+G    SA V+
Sbjct: 921  KGGG----RPRVKRTHTVKAVIKEARDILGESAEALPGESVDDHETEFPNGNAEDSANVN 976

Query: 506  GASRGDSFLVDEEPASVSLKPH-SYASEITTSEQDLDGSEAHSKSVRGATGSRKRRQTAN 682
              S+         PA+V  +     +S+I+ S  D D +E HS S+      R+R++ A 
Sbjct: 977  SESQKP--YNRRIPANVRKRNRVQTSSQISVSGHDGDANEGHSDSLIPGQRKRRRQKAAA 1034

Query: 683  QGSQVPVENRYNLRRRKT*VTTS 751
              +Q   E+RYNLRR KT  TTS
Sbjct: 1035 PPAQTAGESRYNLRRLKTGATTS 1057


>ref|XP_003531908.1| PREDICTED: putative nuclear matrix constituent protein 1-like
            protein-like isoform 1 [Glycine max]
          Length = 1191

 Score = 99.4 bits (246), Expect = 1e-18
 Identities = 85/263 (32%), Positives = 133/263 (50%), Gaps = 15/263 (5%)
 Frame = +2

Query: 8    SGGRDFSLHKCTPKILSSSPLRRIEDSVAQGEAKELPLFNV-QHNLETVKGY---CENEA 175
            SGG    L KCT KI   SP+R+IE S   G  +++   +V Q N+E   G     ENEA
Sbjct: 803  SGGTVSWLRKCTSKIFKISPIRKIE-SEDSGTLRDVVTLSVEQTNVEDSPGRIPDAENEA 861

Query: 176  GPSSRIPRISLDVQKVRWADNNRVIEGQCSPSGNEHSKMDLKVPE---VPEVSMNSQSSA 346
              S  +   S D ++V+  ++   +E    PS    + +D K PE    P+  +  Q S 
Sbjct: 862  ELSFAVVNDSFDARRVQSGNDIIEVEADHDPSVENLNNVDSKAPEDLQAPDSKVGQQKSR 921

Query: 347  QGKHGTYQRRRIRGTNSVEAVVEDAKKVMG-------GENPELTEGKQPSGPTVVSAGVS 505
            +G      R R++ T++V+AV+++A+ ++G       GE+ +  E + P+G    SA V+
Sbjct: 922  KGGG----RPRVKRTHTVKAVIKEARDILGESAEALPGESVDDHETEFPNGNAEDSANVN 977

Query: 506  GASRGDSFLVDEEPASVSLKPH-SYASEITTSEQDLDGSEAHSKSVRGATGSRKRRQTAN 682
              S+         PA+V  +     +S+I+ S  D D +E HS S+      R+R++ A 
Sbjct: 978  SESQKP--YNRRIPANVRKRNRVQTSSQISVSGHDGDANEGHSDSLIPGQRKRRRQKAAA 1035

Query: 683  QGSQVPVENRYNLRRRKT*VTTS 751
              +Q   E+RYNLRR KT  TTS
Sbjct: 1036 PPAQTAGESRYNLRRLKTGATTS 1058