BLASTX nr result

ID: Coptis23_contig00011921 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00011921
         (1054 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632670.1| PREDICTED: uncharacterized protein LOC100251...   253   6e-65
ref|XP_002269770.1| PREDICTED: uncharacterized protein LOC100251...   253   6e-65
ref|XP_002301027.1| predicted protein [Populus trichocarpa] gi|2...   249   1e-63
emb|CBI30520.3| unnamed protein product [Vitis vinifera]              246   7e-63
gb|ABK92545.1| unknown [Populus trichocarpa]                          241   2e-61

>ref|XP_003632670.1| PREDICTED: uncharacterized protein LOC100251163 isoform 2 [Vitis
            vinifera]
          Length = 437

 Score =  253 bits (646), Expect = 6e-65
 Identities = 139/266 (52%), Positives = 184/266 (69%), Gaps = 9/266 (3%)
 Frame = +2

Query: 284  PVAKQMIEYGINLARKDKTSDSYAQGLLVLEQCLSSAGNE-------NTKGVVLLAMSTL 442
            PVA QMI+Y ++ AR  K+ +SYAQGLLVLEQCLS+  NE       N++G+VLLAMSTL
Sbjct: 49   PVALQMIDYALSHARSLKSDESYAQGLLVLEQCLSTHSNEVDDTTSQNSRGMVLLAMSTL 108

Query: 443  LSERGDLNDGMEKLKEIRKLGSSHLGVRVAAVEGLIGLSLEKGQDGVALLIADTCSELLK 622
            LSERG  +D ++KL+ I+ L  SHLGVRVA++EGL+GL+L+  +D  + ++AD C +LL 
Sbjct: 109  LSERGAFDDAIDKLQIIQGLAESHLGVRVASMEGLVGLNLQLERDDTSRVLADKCVQLLG 168

Query: 623  PNSEDVRTLSNEFQGFL--VRANAIRGLVEVLRGKVEIARKCFEEIPDHKYSLGNVMLSH 796
             ++ D+    N F   +  VRA A++GLVE++ G +E A   F+ + D K   GN  LS+
Sbjct: 169  NDTADI---GNGFGSKVLNVRAKALKGLVELVHGNLESAESFFQGLQDEKGCTGNAALSY 225

Query: 797  GEFLHATGNFALAKGYYQKAIEASSETDSFSDLDTLAACNLVPMEVRLGVTCALGQLEAH 976
            GEFLH+ G F+LAK  YQKAIE  S    F+D   LAAC++   EV+L  TC LGQLE  
Sbjct: 226  GEFLHSMGKFSLAKELYQKAIEGISANKEFADPYALAACSMSGREVQLAATCDLGQLEGQ 285

Query: 977  SGNFNDAEEILTKALTKAEEDFGSHH 1054
             GNF++AEEILT+ LTK EE FGSHH
Sbjct: 286  LGNFSEAEEILTRVLTKTEEHFGSHH 311


>ref|XP_002269770.1| PREDICTED: uncharacterized protein LOC100251163 isoform 1 [Vitis
            vinifera]
          Length = 434

 Score =  253 bits (646), Expect = 6e-65
 Identities = 139/266 (52%), Positives = 184/266 (69%), Gaps = 9/266 (3%)
 Frame = +2

Query: 284  PVAKQMIEYGINLARKDKTSDSYAQGLLVLEQCLSSAGNE-------NTKGVVLLAMSTL 442
            PVA QMI+Y ++ AR  K+ +SYAQGLLVLEQCLS+  NE       N++G+VLLAMSTL
Sbjct: 49   PVALQMIDYALSHARSLKSDESYAQGLLVLEQCLSTHSNEVDDTTSQNSRGMVLLAMSTL 108

Query: 443  LSERGDLNDGMEKLKEIRKLGSSHLGVRVAAVEGLIGLSLEKGQDGVALLIADTCSELLK 622
            LSERG  +D ++KL+ I+ L  SHLGVRVA++EGL+GL+L+  +D  + ++AD C +LL 
Sbjct: 109  LSERGAFDDAIDKLQIIQGLAESHLGVRVASMEGLVGLNLQLERDDTSRVLADKCVQLLG 168

Query: 623  PNSEDVRTLSNEFQGFL--VRANAIRGLVEVLRGKVEIARKCFEEIPDHKYSLGNVMLSH 796
             ++ D+    N F   +  VRA A++GLVE++ G +E A   F+ + D K   GN  LS+
Sbjct: 169  NDTADI---GNGFGSKVLNVRAKALKGLVELVHGNLESAESFFQGLQDEKGCTGNAALSY 225

Query: 797  GEFLHATGNFALAKGYYQKAIEASSETDSFSDLDTLAACNLVPMEVRLGVTCALGQLEAH 976
            GEFLH+ G F+LAK  YQKAIE  S    F+D   LAAC++   EV+L  TC LGQLE  
Sbjct: 226  GEFLHSMGKFSLAKELYQKAIEGISANKEFADPYALAACSMSGREVQLAATCDLGQLEGQ 285

Query: 977  SGNFNDAEEILTKALTKAEEDFGSHH 1054
             GNF++AEEILT+ LTK EE FGSHH
Sbjct: 286  LGNFSEAEEILTRVLTKTEEHFGSHH 311


>ref|XP_002301027.1| predicted protein [Populus trichocarpa] gi|222842753|gb|EEE80300.1|
            predicted protein [Populus trichocarpa]
          Length = 434

 Score =  249 bits (635), Expect = 1e-63
 Identities = 134/265 (50%), Positives = 178/265 (67%), Gaps = 7/265 (2%)
 Frame = +2

Query: 281  DPVAKQMIEYGINLARKDKTSDSYAQGLLVLEQCLSSAGNEN-------TKGVVLLAMST 439
            +PVA QMI+Y ++LA+  K+ +S  Q +LVLEQCLSS  +EN       +KG+VLLAMS+
Sbjct: 49   NPVALQMIDYALSLAKSQKSDESQGQAMLVLEQCLSSQSSENQDVVTHNSKGMVLLAMSS 108

Query: 440  LLSERGDLNDGMEKLKEIRKLGSSHLGVRVAAVEGLIGLSLEKGQDGVALLIADTCSELL 619
            LLS RG  ND MEKL+ I+ L +SHL VRVAA+E L+GL+LE G D  + ++AD C ELL
Sbjct: 109  LLSARGSYNDAMEKLQNIQDLINSHLDVRVAAMEALVGLNLEMGNDDTSSVLADKCLELL 168

Query: 620  KPNSEDVRTLSNEFQGFLVRANAIRGLVEVLRGKVEIARKCFEEIPDHKYSLGNVMLSHG 799
                 +++      +    RA AI+GL E+++G +E A   F+   D+K  +GN  LS+G
Sbjct: 169  --GKVELKNSDEGSEVASARAKAIKGLAELVQGNLESAEPFFQGFLDNKGCIGNAALSYG 226

Query: 800  EFLHATGNFALAKGYYQKAIEASSETDSFSDLDTLAACNLVPMEVRLGVTCALGQLEAHS 979
            EFLHAT NF+LAK +YQK I+  +    F+D+  LAACN+   EV L  TCALGQLE H 
Sbjct: 227  EFLHATRNFSLAKDFYQKVIQEVANKKDFTDVRALAACNMASEEVLLAATCALGQLEVHM 286

Query: 980  GNFNDAEEILTKALTKAEEDFGSHH 1054
            GNF +AEE LT AL +AE+ FGS H
Sbjct: 287  GNFGNAEETLTSALNRAEQLFGSRH 311


>emb|CBI30520.3| unnamed protein product [Vitis vinifera]
          Length = 381

 Score =  246 bits (628), Expect = 7e-63
 Identities = 135/261 (51%), Positives = 180/261 (68%), Gaps = 9/261 (3%)
 Frame = +2

Query: 299  MIEYGINLARKDKTSDSYAQGLLVLEQCLSSAGNE-------NTKGVVLLAMSTLLSERG 457
            MI+Y ++ AR  K+ +SYAQGLLVLEQCLS+  NE       N++G+VLLAMSTLLSERG
Sbjct: 1    MIDYALSHARSLKSDESYAQGLLVLEQCLSTHSNEVDDTTSQNSRGMVLLAMSTLLSERG 60

Query: 458  DLNDGMEKLKEIRKLGSSHLGVRVAAVEGLIGLSLEKGQDGVALLIADTCSELLKPNSED 637
              +D ++KL+ I+ L  SHLGVRVA++EGL+GL+L+  +D  + ++AD C +LL  ++ D
Sbjct: 61   AFDDAIDKLQIIQGLAESHLGVRVASMEGLVGLNLQLERDDTSRVLADKCVQLLGNDTAD 120

Query: 638  VRTLSNEFQGFL--VRANAIRGLVEVLRGKVEIARKCFEEIPDHKYSLGNVMLSHGEFLH 811
            +    N F   +  VRA A++GLVE++ G +E A   F+ + D K   GN  LS+GEFLH
Sbjct: 121  I---GNGFGSKVLNVRAKALKGLVELVHGNLESAESFFQGLQDEKGCTGNAALSYGEFLH 177

Query: 812  ATGNFALAKGYYQKAIEASSETDSFSDLDTLAACNLVPMEVRLGVTCALGQLEAHSGNFN 991
            + G F+LAK  YQKAIE  S    F+D   LAAC++   EV+L  TC LGQLE   GNF+
Sbjct: 178  SMGKFSLAKELYQKAIEGISANKEFADPYALAACSMSGREVQLAATCDLGQLEGQLGNFS 237

Query: 992  DAEEILTKALTKAEEDFGSHH 1054
            +AEEILT+ LTK EE FGSHH
Sbjct: 238  EAEEILTRVLTKTEEHFGSHH 258


>gb|ABK92545.1| unknown [Populus trichocarpa]
          Length = 380

 Score =  241 bits (616), Expect = 2e-61
 Identities = 130/259 (50%), Positives = 173/259 (66%), Gaps = 7/259 (2%)
 Frame = +2

Query: 299  MIEYGINLARKDKTSDSYAQGLLVLEQCLSSAGNEN-------TKGVVLLAMSTLLSERG 457
            MI+Y ++LA+  K+ +S  Q +LVLEQCLSS  +EN       +KG+VLLAMS+LLS RG
Sbjct: 1    MIDYALSLAKSQKSDESQGQAMLVLEQCLSSQSSENQDVVTHNSKGMVLLAMSSLLSARG 60

Query: 458  DLNDGMEKLKEIRKLGSSHLGVRVAAVEGLIGLSLEKGQDGVALLIADTCSELLKPNSED 637
              ND MEKL+ I+ L +SHL VRVAA+E L+GL+LE G D  + ++AD C ELL     +
Sbjct: 61   SYNDAMEKLQNIQDLINSHLDVRVAAMEALVGLNLEMGNDDTSSVLADKCLELL--GKVE 118

Query: 638  VRTLSNEFQGFLVRANAIRGLVEVLRGKVEIARKCFEEIPDHKYSLGNVMLSHGEFLHAT 817
            ++      +    RA AI+GL E+++G +E A   F+   D+K  +GN  LS+GEFLHAT
Sbjct: 119  LKNSDEGSEVASARAKAIKGLAELVQGNLESAEPFFQGFLDNKGCIGNAALSYGEFLHAT 178

Query: 818  GNFALAKGYYQKAIEASSETDSFSDLDTLAACNLVPMEVRLGVTCALGQLEAHSGNFNDA 997
             NF+LAK +YQK I+  +    F+D+  LAACN+   EV L  TCALGQLE H GNF +A
Sbjct: 179  RNFSLAKDFYQKVIQEVANKKDFTDVRALAACNMASEEVLLAATCALGQLEVHMGNFGNA 238

Query: 998  EEILTKALTKAEEDFGSHH 1054
            EE LT AL +AE+ FGS H
Sbjct: 239  EETLTSALNRAEQLFGSRH 257


Top