BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00011920
         (953 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281869.1| PREDICTED: translation machinery-associated ...   324   2e-86
ref|XP_002279152.1| PREDICTED: translation machinery-associated ...   323   5e-86
ref|XP_002309499.1| predicted protein [Populus trichocarpa] gi|2...   321   2e-85
ref|XP_002514117.1| Density-regulated protein, putative [Ricinus...   320   3e-85
ref|XP_002279109.1| PREDICTED: translation machinery-associated ...   320   4e-85

>ref|XP_002281869.1| PREDICTED: translation machinery-associated protein 22 [Vitis
           vinifera] gi|297738660|emb|CBI27905.3| unnamed protein
           product [Vitis vinifera]
          Length = 197

 Score =  324 bits (830), Expect = 2e-86
 Identities = 161/194 (82%), Positives = 178/194 (91%), Gaps = 3/194 (1%)
 Frame = -3

Query: 948 RVLYCGVCTLPAEYCEFGPDFEKCKPWLIQNAPDVYPDLIQEANSKEADKVSEQLQSVAI 769
           RVLYC VC+LPAEYCEFG DFEKCKPWLIQNAPD+YPDL++EA+SKEADKV++QLQS A+
Sbjct: 9   RVLYCQVCSLPAEYCEFGSDFEKCKPWLIQNAPDLYPDLLKEADSKEADKVAQQLQSTAL 68

Query: 768 SS---DGTAPPPSSANSGTSATKKEEVKRLPGGKIKKKDKQEVVIEKVVRNKRKCVTIVK 598
           SS   DG+AP     + G SA+K+EEVKRLPGGKIK+K+KQEVVIEK+VRNKRKC+T VK
Sbjct: 69  SSGSADGSAP-----SGGASASKQEEVKRLPGGKIKRKEKQEVVIEKIVRNKRKCITTVK 123

Query: 597 GLELFGIKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDIAYDIVEFITTTWPDVPET 418
           GLELFGIKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDIAYDIVEFIT TWPDVPET
Sbjct: 124 GLELFGIKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDIAYDIVEFITETWPDVPET 183

Query: 417 AIYFIEDGRKVPAA 376
           AI+FIEDGRKV AA
Sbjct: 184 AIFFIEDGRKVAAA 197


>ref|XP_002279152.1| PREDICTED: translation machinery-associated protein 22 isoform 2
           [Vitis vinifera]
          Length = 199

 Score =  323 bits (827), Expect = 5e-86
 Identities = 156/191 (81%), Positives = 173/191 (90%)
 Frame = -3

Query: 948 RVLYCGVCTLPAEYCEFGPDFEKCKPWLIQNAPDVYPDLIQEANSKEADKVSEQLQSVAI 769
           RVLYC VC+LPAEYCEFGPDFEKCKPWLI+NAP++YPDL++EA+ KEADKVSEQLQSV I
Sbjct: 9   RVLYCSVCSLPAEYCEFGPDFEKCKPWLIKNAPELYPDLLKEASEKEADKVSEQLQSVGI 68

Query: 768 SSDGTAPPPSSANSGTSATKKEEVKRLPGGKIKKKDKQEVVIEKVVRNKRKCVTIVKGLE 589
           SS        SA   TS +K+EEVKRLPGGKIKKK+KQEV+IEKVVRNKRKC+TIVKGL+
Sbjct: 69  SSGAGNETAPSAARKTSTSKQEEVKRLPGGKIKKKEKQEVIIEKVVRNKRKCITIVKGLD 128

Query: 588 LFGIKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDIAYDIVEFITTTWPDVPETAIY 409
           LFG+KL DASKKLGKKFATGASVVKGPT+KEQIDVQGDI+YDIVEF+T TWPDVPETAIY
Sbjct: 129 LFGVKLGDASKKLGKKFATGASVVKGPTDKEQIDVQGDISYDIVEFVTDTWPDVPETAIY 188

Query: 408 FIEDGRKVPAA 376
           FIEDGRKV AA
Sbjct: 189 FIEDGRKVSAA 199


>ref|XP_002309499.1| predicted protein [Populus trichocarpa] gi|222855475|gb|EEE93022.1|
           predicted protein [Populus trichocarpa]
          Length = 200

 Score =  321 bits (822), Expect = 2e-85
 Identities = 157/192 (81%), Positives = 175/192 (91%), Gaps = 1/192 (0%)
 Frame = -3

Query: 948 RVLYCGVCTLPAEYCEFGPDFEKCKPWLIQNAPDVYPDLIQEANSKEADKVSEQLQSVAI 769
           +VLYC +C+LPAEYCEFGPDFEKCKPWLI NAP++YPDL++EAN KEA++VSEQLQS  I
Sbjct: 9   KVLYCPLCSLPAEYCEFGPDFEKCKPWLIINAPELYPDLLKEANEKEAERVSEQLQSAGI 68

Query: 768 SSDGTAPPPSSANSG-TSATKKEEVKRLPGGKIKKKDKQEVVIEKVVRNKRKCVTIVKGL 592
           SS G     S   SG TS++K+EEVKRLPGGKIKKK +QEVVIEKVVRNKRKC+TI+KGL
Sbjct: 69  SSSGADGAASFVQSGVTSSSKQEEVKRLPGGKIKKKARQEVVIEKVVRNKRKCITIIKGL 128

Query: 591 ELFGIKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDIAYDIVEFITTTWPDVPETAI 412
           +LFGIKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDIAYDIVEFIT TWPDVPETAI
Sbjct: 129 DLFGIKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDIAYDIVEFITETWPDVPETAI 188

Query: 411 YFIEDGRKVPAA 376
           +FIEDG+KVPAA
Sbjct: 189 FFIEDGKKVPAA 200


>ref|XP_002514117.1| Density-regulated protein, putative [Ricinus communis]
           gi|223546573|gb|EEF48071.1| Density-regulated protein,
           putative [Ricinus communis]
          Length = 196

 Score =  320 bits (820), Expect = 3e-85
 Identities = 156/190 (82%), Positives = 172/190 (90%)
 Frame = -3

Query: 948 RVLYCGVCTLPAEYCEFGPDFEKCKPWLIQNAPDVYPDLIQEANSKEADKVSEQLQSVAI 769
           RVLYC VC+LPAEYCEFGPDFEKCKPWLIQNAPD+YPDLI+EAN+KEADKV++QLQ   I
Sbjct: 9   RVLYCQVCSLPAEYCEFGPDFEKCKPWLIQNAPDLYPDLIKEANAKEADKVADQLQFTGI 68

Query: 768 SSDGTAPPPSSANSGTSATKKEEVKRLPGGKIKKKDKQEVVIEKVVRNKRKCVTIVKGLE 589
           SS G      S +SG ++  KEEVKRLPGGKIKKK+KQEVVIEKV RNKRKC+T VKGLE
Sbjct: 69  SSSGG---DGSTSSGGTSAPKEEVKRLPGGKIKKKEKQEVVIEKVTRNKRKCITTVKGLE 125

Query: 588 LFGIKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDIAYDIVEFITTTWPDVPETAIY 409
           LFG+KLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDI++DIV+FIT TWPDVPETAIY
Sbjct: 126 LFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISFDIVDFITETWPDVPETAIY 185

Query: 408 FIEDGRKVPA 379
           FIEDG+KVPA
Sbjct: 186 FIEDGKKVPA 195


>ref|XP_002279109.1| PREDICTED: translation machinery-associated protein 22 isoform 1
           [Vitis vinifera] gi|296081652|emb|CBI20657.3| unnamed
           protein product [Vitis vinifera]
          Length = 197

 Score =  320 bits (819), Expect = 4e-85
 Identities = 157/192 (81%), Positives = 174/192 (90%), Gaps = 1/192 (0%)
 Frame = -3

Query: 948 RVLYCGVCTLPAEYCEFGPDFEKCKPWLIQNAPDVYPDLIQEANSKEADKVSEQLQSVAI 769
           RVLYC VC+LPAEYCEFGPDFEKCKPWLI+NAP++YPDL++EA+ KEADKVSEQLQSV I
Sbjct: 9   RVLYCSVCSLPAEYCEFGPDFEKCKPWLIKNAPELYPDLLKEASEKEADKVSEQLQSVGI 68

Query: 768 SSD-GTAPPPSSANSGTSATKKEEVKRLPGGKIKKKDKQEVVIEKVVRNKRKCVTIVKGL 592
           SS  G    PS     TS +K+EEVKRLPGGKIKKK+KQEV+IEKVVRNKRKC+TIVKGL
Sbjct: 69  SSGAGNETAPSGK---TSTSKQEEVKRLPGGKIKKKEKQEVIIEKVVRNKRKCITIVKGL 125

Query: 591 ELFGIKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDIAYDIVEFITTTWPDVPETAI 412
           +LFG+KL DASKKLGKKFATGASVVKGPT+KEQIDVQGDI+YDIVEF+T TWPDVPETAI
Sbjct: 126 DLFGVKLGDASKKLGKKFATGASVVKGPTDKEQIDVQGDISYDIVEFVTDTWPDVPETAI 185

Query: 411 YFIEDGRKVPAA 376
           YFIEDGRKV AA
Sbjct: 186 YFIEDGRKVSAA 197