BLASTX nr result

ID: Coptis23_contig00011908 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00011908
         (307 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270714.2| PREDICTED: uncharacterized protein LOC100258...   109   2e-22
emb|CBI17221.3| unnamed protein product [Vitis vinifera]              109   2e-22
ref|XP_003532744.1| PREDICTED: uncharacterized protein LOC100780...   102   2e-20
ref|XP_004157719.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin ca...   100   2e-19
ref|XP_004134375.1| PREDICTED: uncharacterized protein LOC101204...   100   2e-19

>ref|XP_002270714.2| PREDICTED: uncharacterized protein LOC100258878 [Vitis vinifera]
          Length = 1578

 Score =  109 bits (273), Expect = 2e-22
 Identities = 57/102 (55%), Positives = 69/102 (67%)
 Frame = +2

Query: 2    KEMLLQCGSLDETNYSLSKAISHVYEGLHDFFVTECKVCEIPPSRSYMQILVQMSKVALP 181
            KE+L QC S+   ++ LSK + +VY G HDFFV  C V E P   SY++ILVQ+S VALP
Sbjct: 954  KEILPQCDSVGVVDHPLSKMLCNVYPGHHDFFVNGCGVHESPSLHSYIEILVQLSAVALP 1013

Query: 182  SQAASVVLRVLMKWANDLKSGLLELEDAVYLRECLLKRETAV 307
            SQAA+ V RV +KW   LKS  L  ED VYL+ECLLK E  V
Sbjct: 1014 SQAANAVFRVFLKWTEGLKSKTLSSEDIVYLKECLLKLEFTV 1055


>emb|CBI17221.3| unnamed protein product [Vitis vinifera]
          Length = 2388

 Score =  109 bits (273), Expect = 2e-22
 Identities = 57/102 (55%), Positives = 69/102 (67%)
 Frame = +2

Query: 2    KEMLLQCGSLDETNYSLSKAISHVYEGLHDFFVTECKVCEIPPSRSYMQILVQMSKVALP 181
            KE+L QC S+   ++ LSK + +VY G HDFFV  C V E P   SY++ILVQ+S VALP
Sbjct: 1796 KEILPQCDSVGVVDHPLSKMLCNVYPGHHDFFVNGCGVHESPSLHSYIEILVQLSAVALP 1855

Query: 182  SQAASVVLRVLMKWANDLKSGLLELEDAVYLRECLLKRETAV 307
            SQAA+ V RV +KW   LKS  L  ED VYL+ECLLK E  V
Sbjct: 1856 SQAANAVFRVFLKWTEGLKSKTLSSEDIVYLKECLLKLEFTV 1897


>ref|XP_003532744.1| PREDICTED: uncharacterized protein LOC100780184 [Glycine max]
          Length = 2785

 Score =  102 bits (255), Expect = 2e-20
 Identities = 52/102 (50%), Positives = 71/102 (69%)
 Frame = +2

Query: 2    KEMLLQCGSLDETNYSLSKAISHVYEGLHDFFVTECKVCEIPPSRSYMQILVQMSKVALP 181
            KE   QCGS   ++  ++K++ ++Y  L  FFV EC+V E PP  SY+QI++Q+S V LP
Sbjct: 2161 KEFHPQCGS---SSSPINKSLCNIYPSLRGFFVDECQVQEAPPLCSYIQIMLQLSTVTLP 2217

Query: 182  SQAASVVLRVLMKWANDLKSGLLELEDAVYLRECLLKRETAV 307
            SQAA  +L+V +KWA+ LKSGLL +ED  YL+ECL K E  V
Sbjct: 2218 SQAADKILQVFLKWADGLKSGLLSVEDVTYLKECLSKLEFPV 2259


>ref|XP_004157719.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase
            2-like [Cucumis sativus]
          Length = 1225

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 48/95 (50%), Positives = 63/95 (66%)
 Frame = +2

Query: 2    KEMLLQCGSLDETNYSLSKAISHVYEGLHDFFVTECKVCEIPPSRSYMQILVQMSKVALP 181
            K+M LQC      +  + K + ++Y GL  FF++EC V E PP RSY+Q L Q+S VALP
Sbjct: 971  KDMHLQCSLTKMVDSPIIKTLCNIYPGLKKFFISECGVHEYPPLRSYLQFLKQLSAVALP 1030

Query: 182  SQAASVVLRVLMKWANDLKSGLLELEDAVYLRECL 286
            SQA  +V  V +KWAN L+SGLL  ED  YL+EC+
Sbjct: 1031 SQANDMVFEVFLKWANGLESGLLGSEDMAYLKECI 1065


>ref|XP_004134375.1| PREDICTED: uncharacterized protein LOC101204025 [Cucumis sativus]
          Length = 2724

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 48/95 (50%), Positives = 63/95 (66%)
 Frame = +2

Query: 2    KEMLLQCGSLDETNYSLSKAISHVYEGLHDFFVTECKVCEIPPSRSYMQILVQMSKVALP 181
            K+M LQC      +  + K + ++Y GL  FF++EC V E PP RSY+Q L Q+S VALP
Sbjct: 2113 KDMHLQCSLTKMVDSPIIKTLCNIYPGLKKFFISECGVHEYPPLRSYLQFLKQLSAVALP 2172

Query: 182  SQAASVVLRVLMKWANDLKSGLLELEDAVYLRECL 286
            SQA  +V  V +KWAN L+SGLL  ED  YL+EC+
Sbjct: 2173 SQANDMVFEVFLKWANGLESGLLGSEDMAYLKECI 2207


Top