BLASTX nr result

ID: Coptis23_contig00011903 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00011903
         (693 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284437.1| PREDICTED: uncharacterized protein LOC100243...   134   2e-29
ref|XP_002284431.1| PREDICTED: uncharacterized protein LOC100243...   134   2e-29
emb|CAN64473.1| hypothetical protein VITISV_001623 [Vitis vinifera]   134   2e-29
emb|CAJ15148.2| sialyltransferase-like protein [Lotus japonicus]      131   1e-28
ref|XP_003630562.1| Alpha-2,8-sialyltransferase 8B [Medicago tru...   130   2e-28

>ref|XP_002284437.1| PREDICTED: uncharacterized protein LOC100243999 isoform 2 [Vitis
           vinifera]
          Length = 430

 Score =  134 bits (336), Expect = 2e-29
 Identities = 65/100 (65%), Positives = 81/100 (81%), Gaps = 1/100 (1%)
 Frame = -1

Query: 693 LIRIHSPMRAKPNRLVKWLPNHGTLAAARIASEKLLRRVGAGR-DPLGACSIVKKQRTQK 517
           LI+IHSPMRA PNR+V ++P+H T+ AAR ASEKLLRRVGAG  +PL ACSI+KKQ  ++
Sbjct: 331 LIKIHSPMRADPNRIVTYVPSHSTVTAARTASEKLLRRVGAGSGEPLHACSIIKKQLQRE 390

Query: 516 NTKTDGLPQAAVKHQSYVKGATMYPLEHSVGHGMLCTVPN 397
                 + +AAV H+++VKGATMYPLEHS GHG+LCTVPN
Sbjct: 391 PIGISSIRKAAVDHKNFVKGATMYPLEHSPGHGLLCTVPN 430


>ref|XP_002284431.1| PREDICTED: uncharacterized protein LOC100243999 isoform 1 [Vitis
           vinifera] gi|297734490|emb|CBI15737.3| unnamed protein
           product [Vitis vinifera]
          Length = 439

 Score =  134 bits (336), Expect = 2e-29
 Identities = 65/100 (65%), Positives = 81/100 (81%), Gaps = 1/100 (1%)
 Frame = -1

Query: 693 LIRIHSPMRAKPNRLVKWLPNHGTLAAARIASEKLLRRVGAGR-DPLGACSIVKKQRTQK 517
           LI+IHSPMRA PNR+V ++P+H T+ AAR ASEKLLRRVGAG  +PL ACSI+KKQ  ++
Sbjct: 340 LIKIHSPMRADPNRIVTYVPSHSTVTAARTASEKLLRRVGAGSGEPLHACSIIKKQLQRE 399

Query: 516 NTKTDGLPQAAVKHQSYVKGATMYPLEHSVGHGMLCTVPN 397
                 + +AAV H+++VKGATMYPLEHS GHG+LCTVPN
Sbjct: 400 PIGISSIRKAAVDHKNFVKGATMYPLEHSPGHGLLCTVPN 439


>emb|CAN64473.1| hypothetical protein VITISV_001623 [Vitis vinifera]
          Length = 505

 Score =  134 bits (336), Expect = 2e-29
 Identities = 65/100 (65%), Positives = 81/100 (81%), Gaps = 1/100 (1%)
 Frame = -1

Query: 693 LIRIHSPMRAKPNRLVKWLPNHGTLAAARIASEKLLRRVGAGR-DPLGACSIVKKQRTQK 517
           LI+IHSPMRA PNR+V ++P+H T+ AAR ASEKLLRRVGAG  +PL ACSI+KKQ  ++
Sbjct: 406 LIKIHSPMRADPNRIVTYVPSHSTVTAARTASEKLLRRVGAGSGEPLHACSIIKKQLQRE 465

Query: 516 NTKTDGLPQAAVKHQSYVKGATMYPLEHSVGHGMLCTVPN 397
                 + +AAV H+++VKGATMYPLEHS GHG+LCTVPN
Sbjct: 466 PIGISSIRKAAVDHKNFVKGATMYPLEHSPGHGLLCTVPN 505


>emb|CAJ15148.2| sialyltransferase-like protein [Lotus japonicus]
          Length = 442

 Score =  131 bits (329), Expect = 1e-28
 Identities = 65/99 (65%), Positives = 75/99 (75%), Gaps = 1/99 (1%)
 Frame = -1

Query: 693 LIRIHSPMRAKPNRLVKWLPNHGTLAAARIASEKLLRRVGAG-RDPLGACSIVKKQRTQK 517
           LI+IHSPMRA PNR+VKW+P+H  + AA IASEKLLRRVGAG  DPL ACSI KKQ  + 
Sbjct: 342 LIKIHSPMRADPNRVVKWVPSHHIMRAASIASEKLLRRVGAGSEDPLRACSITKKQIKRN 401

Query: 516 NTKTDGLPQAAVKHQSYVKGATMYPLEHSVGHGMLCTVP 400
           +     L + A+ H  YVKG TMYPLEHS GHG+LCTVP
Sbjct: 402 SNAVSNLRKVALDHIRYVKGTTMYPLEHSPGHGVLCTVP 440


>ref|XP_003630562.1| Alpha-2,8-sialyltransferase 8B [Medicago truncatula]
           gi|355524584|gb|AET05038.1| Alpha-2,8-sialyltransferase
           8B [Medicago truncatula]
          Length = 322

 Score =  130 bits (327), Expect = 2e-28
 Identities = 65/100 (65%), Positives = 76/100 (76%), Gaps = 1/100 (1%)
 Frame = -1

Query: 693 LIRIHSPMRAKPNRLVKWLPNHGTLAAARIASEKLLRRVGAG-RDPLGACSIVKKQRTQK 517
           LI+IHSPMRA PNR+VKW+P+   + AARIASEKLLRRVGAG  DPL ACS+VKKQ  + 
Sbjct: 221 LIKIHSPMRADPNRVVKWVPSPHIIRAARIASEKLLRRVGAGSEDPLRACSVVKKQAKRN 280

Query: 516 NTKTDGLPQAAVKHQSYVKGATMYPLEHSVGHGMLCTVPN 397
                 L +AA+ H  YVK  TMYPLEHS GHG+LCTVP+
Sbjct: 281 INAVSKLRKAALDHMRYVKSTTMYPLEHSPGHGLLCTVPS 320


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