BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00011900
         (1155 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001242001.1| uncharacterized protein LOC100789535 [Glycin...   162   1e-37
ref|XP_003543324.1| PREDICTED: nuclear cap-binding protein subun...   161   3e-37
ref|XP_002517864.1| 20 kD nuclear cap binding protein, putative ...   157   4e-36
ref|XP_004137136.1| PREDICTED: nuclear cap-binding protein subun...   156   8e-36
ref|XP_002276868.1| PREDICTED: nuclear cap-binding protein subun...   155   2e-35

>ref|NP_001242001.1| uncharacterized protein LOC100789535 [Glycine max]
           gi|255647255|gb|ACU24095.1| unknown [Glycine max]
          Length = 235

 Score =  162 bits (411), Expect = 1e-37
 Identities = 78/84 (92%), Positives = 82/84 (97%)
 Frame = +3

Query: 15  MALLFKDPNKISAYRDRRFPGSQEEFDLALQTSTTVYVGNMSFYTTEEQVYELFTRAGEI 194
           MALLFKDP+KISAYRDRRFPG+QEEF+ AL TSTTVYVGNMSFYTTEEQVYELF+RAGEI
Sbjct: 1   MALLFKDPSKISAYRDRRFPGTQEEFEHALLTSTTVYVGNMSFYTTEEQVYELFSRAGEI 60

Query: 195 KKIIMGLDKNTKTPCGFCFVLYYS 266
           KKIIMGLDKNTKTPCGFCFVLYYS
Sbjct: 61  KKIIMGLDKNTKTPCGFCFVLYYS 84



 Score =  103 bits (256), Expect = 1e-19
 Identities = 49/69 (71%), Positives = 51/69 (73%)
 Frame = +1

Query: 424 IRVDFDWGFXXXXXXXXXXXXXXVRDEYRTDYDPGRGGYGKLVQQELEAQRQLVDYGTGS 603
           IRVDFDWGF              VRDEYRTDYDPGRGGYGKLVQ+ELE QRQLVDYGTGS
Sbjct: 105 IRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEVQRQLVDYGTGS 164

Query: 604 LGSFQQFVP 630
           LGSF   +P
Sbjct: 165 LGSFPPVIP 173


>ref|XP_003543324.1| PREDICTED: nuclear cap-binding protein subunit 2-like [Glycine max]
          Length = 258

 Score =  161 bits (407), Expect = 3e-37
 Identities = 77/84 (91%), Positives = 81/84 (96%)
 Frame = +3

Query: 15  MALLFKDPNKISAYRDRRFPGSQEEFDLALQTSTTVYVGNMSFYTTEEQVYELFTRAGEI 194
           MALLFKDP+KISAYRDRRFPG+QEEF+ AL TSTTVYVGNMSFYTTEEQVYELF+R GEI
Sbjct: 1   MALLFKDPSKISAYRDRRFPGTQEEFEHALVTSTTVYVGNMSFYTTEEQVYELFSRTGEI 60

Query: 195 KKIIMGLDKNTKTPCGFCFVLYYS 266
           KKIIMGLDKNTKTPCGFCFVLYYS
Sbjct: 61  KKIIMGLDKNTKTPCGFCFVLYYS 84



 Score =  104 bits (259), Expect = 5e-20
 Identities = 64/147 (43%), Positives = 71/147 (48%), Gaps = 3/147 (2%)
 Frame = +1

Query: 424 IRVDFDWGFXXXXXXXXXXXXXXVRDEYRTDYDPG---RGGYGKLVQQELEAQRQLVDYG 594
           IRVDFDWGF              VRDEYRTDYDP     GGYGKLVQ+ELE QRQLVDYG
Sbjct: 105 IRVDFDWGFQEGRQWGRGRSGGQVRDEYRTDYDPDILLLGGYGKLVQKELEVQRQLVDYG 164

Query: 595 TGSLGSFQQFVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQNXXXXXXXXXXXXXXGPE 774
            GSLGSF   +P                            R                  E
Sbjct: 165 AGSLGSFPPVIP----------TSYGRHGGGGGHGHGGSHRHGRDYYRKRHRDDERHTHE 214

Query: 775 KSRRFSGNKSRRVSEHERRQEKNPRFR 855
            S+R S ++SRR ++HE R EKNPRFR
Sbjct: 215 SSKRTSDHESRRNTDHESRPEKNPRFR 241


>ref|XP_002517864.1| 20 kD nuclear cap binding protein, putative [Ricinus communis]
           gi|223542846|gb|EEF44382.1| 20 kD nuclear cap binding
           protein, putative [Ricinus communis]
          Length = 255

 Score =  157 bits (398), Expect = 4e-36
 Identities = 74/84 (88%), Positives = 81/84 (96%)
 Frame = +3

Query: 15  MALLFKDPNKISAYRDRRFPGSQEEFDLALQTSTTVYVGNMSFYTTEEQVYELFTRAGEI 194
           MALLFKDP K+SAYRDR+FPG+QEEF+ AL TSTTVY+GNMSFYTTEEQVYELF+RAGEI
Sbjct: 1   MALLFKDPAKLSAYRDRKFPGNQEEFEHALLTSTTVYIGNMSFYTTEEQVYELFSRAGEI 60

Query: 195 KKIIMGLDKNTKTPCGFCFVLYYS 266
           KKIIMGLDKNTKTPCGFCFVL+YS
Sbjct: 61  KKIIMGLDKNTKTPCGFCFVLFYS 84



 Score = 95.5 bits (236), Expect = 2e-17
 Identities = 63/147 (42%), Positives = 70/147 (47%), Gaps = 3/147 (2%)
 Frame = +1

Query: 424 IRVDFDWGFXXXXXXXXXXXXXXVRDEYRTDYDPG---RGGYGKLVQQELEAQRQLVDYG 594
           IRVDFDWGF              VRDEYRTDYDP     GGYGKLVQ+ELE QRQLVDYG
Sbjct: 105 IRVDFDWGFQEGRQWGRGRSGGQVRDEYRTDYDPDILFLGGYGKLVQRELE-QRQLVDYG 163

Query: 595 TGSLGSFQQFVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQNXXXXXXXXXXXXXXGPE 774
            GSLGSF   +P                            R                  E
Sbjct: 164 AGSLGSFPPVMP------------PPQYGRHGGSGHGGFQRHGRDYHRKRFRDDDRQARE 211

Query: 775 KSRRFSGNKSRRVSEHERRQEKNPRFR 855
            SRR S ++SRR ++ + R EKNPRFR
Sbjct: 212 PSRRTSDHESRRNNDPDSRPEKNPRFR 238


>ref|XP_004137136.1| PREDICTED: nuclear cap-binding protein subunit 2-like [Cucumis
           sativus] gi|449476391|ref|XP_004154724.1| PREDICTED:
           nuclear cap-binding protein subunit 2-like [Cucumis
           sativus]
          Length = 251

 Score =  156 bits (395), Expect = 8e-36
 Identities = 74/84 (88%), Positives = 80/84 (95%)
 Frame = +3

Query: 15  MALLFKDPNKISAYRDRRFPGSQEEFDLALQTSTTVYVGNMSFYTTEEQVYELFTRAGEI 194
           MA LFKDP K+S YRDRRF GSQ+EF++ALQTSTTVYVGNMSFYTTEEQVYELF+RAGEI
Sbjct: 1   MASLFKDPTKLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEI 60

Query: 195 KKIIMGLDKNTKTPCGFCFVLYYS 266
           KKIIMGLDKN+KTPCGFCFVLYYS
Sbjct: 61  KKIIMGLDKNSKTPCGFCFVLYYS 84



 Score =  111 bits (277), Expect = 4e-22
 Identities = 66/144 (45%), Positives = 73/144 (50%)
 Frame = +1

Query: 424 IRVDFDWGFXXXXXXXXXXXXXXVRDEYRTDYDPGRGGYGKLVQQELEAQRQLVDYGTGS 603
           IRVDFDWGF              VRDEYRTDYDPGRGGYGKLVQ+ELEAQRQLVDYGTGS
Sbjct: 105 IRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGS 164

Query: 604 LGSFQQFVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQNXXXXXXXXXXXXXXGPEKSR 783
           LGS    +P                             ++                E S+
Sbjct: 165 LGSMAPVMPQYGKHGGSHGHGNRHGRDYHHRKRYRDDDRH--------------AHESSK 210

Query: 784 RFSGNKSRRVSEHERRQEKNPRFR 855
           R S  +SRR S +E R EKNPRFR
Sbjct: 211 RTSDYESRRNSNYESRPEKNPRFR 234


>ref|XP_002276868.1| PREDICTED: nuclear cap-binding protein subunit 2-like isoform 1
           [Vitis vinifera] gi|359485224|ref|XP_003633238.1|
           PREDICTED: nuclear cap-binding protein subunit 2-like
           isoform 2 [Vitis vinifera]
           gi|359485226|ref|XP_003633239.1| PREDICTED: nuclear
           cap-binding protein subunit 2-like isoform 3 [Vitis
           vinifera]
          Length = 253

 Score =  155 bits (392), Expect = 2e-35
 Identities = 72/84 (85%), Positives = 81/84 (96%)
 Frame = +3

Query: 15  MALLFKDPNKISAYRDRRFPGSQEEFDLALQTSTTVYVGNMSFYTTEEQVYELFTRAGEI 194
           MALLFKDP+K+SAYRD+RFPG+QE+F+ AL TS TVY+GNMSFYTTEEQVYELF+RAGEI
Sbjct: 1   MALLFKDPSKLSAYRDKRFPGTQEDFEHALLTSMTVYIGNMSFYTTEEQVYELFSRAGEI 60

Query: 195 KKIIMGLDKNTKTPCGFCFVLYYS 266
           KKIIMGLDKN+KTPCGFCFVLYYS
Sbjct: 61  KKIIMGLDKNSKTPCGFCFVLYYS 84



 Score =  114 bits (285), Expect = 5e-23
 Identities = 66/144 (45%), Positives = 75/144 (52%)
 Frame = +1

Query: 424 IRVDFDWGFXXXXXXXXXXXXXXVRDEYRTDYDPGRGGYGKLVQQELEAQRQLVDYGTGS 603
           IRVDFDWGF              VRDEYRTDYDPGRGGYGKLVQ+ELEAQRQLVDYG+GS
Sbjct: 105 IRVDFDWGFQEGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQRELEAQRQLVDYGSGS 164

Query: 604 LGSFQQFVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQNXXXXXXXXXXXXXXGPEKSR 783
           LGSF   +P                            R +                + S+
Sbjct: 165 LGSFPPVMP------------SQYGRHGGSQGHGGSNRHSRDYPRKRHRDDDRHSHDFSK 212

Query: 784 RFSGNKSRRVSEHERRQEKNPRFR 855
           R S + SRR S+H+ R EKNPRFR
Sbjct: 213 RTSDHDSRRNSDHDSRPEKNPRFR 236