BLASTX nr result

ID: Coptis23_contig00011895 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00011895
         (1341 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307851.1| predicted protein [Populus trichocarpa] gi|2...   341   2e-91
ref|XP_004139517.1| PREDICTED: tRNA (guanine(9)-N1)-methyltransf...   333   8e-89
emb|CAN75735.1| hypothetical protein VITISV_030149 [Vitis vinifera]   331   3e-88
ref|XP_002533399.1| RNA (guanine-9-) methyltransferase domain co...   330   5e-88
ref|XP_002322499.1| predicted protein [Populus trichocarpa] gi|2...   329   9e-88

>ref|XP_002307851.1| predicted protein [Populus trichocarpa] gi|222853827|gb|EEE91374.1|
            predicted protein [Populus trichocarpa]
          Length = 328

 Score =  341 bits (875), Expect = 2e-91
 Identities = 186/318 (58%), Positives = 219/318 (68%), Gaps = 10/318 (3%)
 Frame = -2

Query: 1304 ELMENEETTLE-RSNNETSPLSKNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE 1128
            E  +N++ TLE + N++ +PLSKNA                                  E
Sbjct: 6    ESEQNDQNTLESQPNSQPTPLSKNAQKKLLKQQKWEAKKAEKKAQVKEQKMKEAERKRKE 65

Query: 1127 WDEKLSSL-TEAEKLKLIETXXXXXXXXXXXXXXXXXXKIEKLERAKLDGQKIVVDLEFT 951
            W+E+LSS  +E E+LKLIE+                  K+++L +AK  GQ IV+DLEF 
Sbjct: 66   WEERLSSCASEEERLKLIESRRELRKERMEKRAEEKEDKVQRLSKAKEFGQNIVIDLEFA 125

Query: 950  DLMTGNEINSLVHQIMYCYAVNGRCDSPAHLWLTGCRGEIQTQLQRLPGFDKWFIEKESR 771
            DLMT +EI+SLV QIMYCYAVN RC SP HLWLTGCRGE++ QLQRLPGFDKW IEKES+
Sbjct: 126  DLMTNSEIHSLVQQIMYCYAVNRRCTSPGHLWLTGCRGEMENQLQRLPGFDKWIIEKESQ 185

Query: 770  SYIDALEQQKENLVYLTADAETVLDELDPKKIYIIGGLVDRNRWKGITMNKAKDQGISTA 591
            SYIDAL+ QKENLVYLTAD+ETVLDELD KKIYIIGGLVDRNRWKGITM KA +QGI TA
Sbjct: 186  SYIDALQDQKENLVYLTADSETVLDELDLKKIYIIGGLVDRNRWKGITMKKASEQGIQTA 245

Query: 590  KLPIGSFLKMSSSQVLTVNQVVEILLRFLETRDWKTSFFQVIPQRKRCEAEV-------- 435
            KLPIGS+LKMSSSQVLTVNQVVEILL+F+E +DWK SFFQVIPQRKR E +         
Sbjct: 246  KLPIGSYLKMSSSQVLTVNQVVEILLKFVEIKDWKASFFQVIPQRKRGETDSEELQGVDG 305

Query: 434  EVQDTEDVDIEPKKKCTE 381
            E  + ED   + KK+C E
Sbjct: 306  EELENEDDPSDKKKRCIE 323


>ref|XP_004139517.1| PREDICTED: tRNA (guanine(9)-N1)-methyltransferase-like [Cucumis
            sativus]
          Length = 333

 Score =  333 bits (853), Expect = 8e-89
 Identities = 172/261 (65%), Positives = 202/261 (77%), Gaps = 9/261 (3%)
 Frame = -2

Query: 1127 WDEKLSSLTEAEKLKLIETXXXXXXXXXXXXXXXXXXKIEKLERAKLDGQKIVVDLEFTD 948
            W+EKL+S+TE E+ KLIE+                  KIE+L  A+  GQ IV+DLEF+ 
Sbjct: 68   WEEKLASVTEEERAKLIESRRNLRKERMGKRSEDREKKIERLSTARDYGQNIVIDLEFSH 127

Query: 947  LMTGNEINSLVHQIMYCYAVNGRCDSPAHLWLTGCRGEIQTQLQRLPGFDKWFIEKESRS 768
            LMT  EI+SLV QIMYCYAVNGRC SP HLWLTGC GE++TQLQRLPGFDKW IEKE RS
Sbjct: 128  LMTPWEIHSLVQQIMYCYAVNGRCPSPCHLWLTGCNGEMETQLQRLPGFDKWIIEKECRS 187

Query: 767  YIDALEQQKENLVYLTADAETVLDELDPKKIYIIGGLVDRNRWKGITMNKAKDQGISTAK 588
            YIDAL++QKENLVYLTAD+ETVLD+LD KKIYI+GGLVDRNRWKGITM KA++Q I TAK
Sbjct: 188  YIDALQEQKENLVYLTADSETVLDDLDLKKIYIVGGLVDRNRWKGITMKKAQEQEIQTAK 247

Query: 587  LPIGSFLKMSSSQVLTVNQVVEILLRFLETRDWKTSFFQVIPQRKRCEAE------VEVQ 426
            LPIGS+LKMSSSQVLTVNQV+EILL++LETRDWK SFF+V+PQRKRC  +      V+ +
Sbjct: 248  LPIGSYLKMSSSQVLTVNQVIEILLKYLETRDWKDSFFEVVPQRKRCGGDSNSDHPVDGE 307

Query: 425  DTEDVDIE---PKKKCTERSS 372
            +  D D +    K KC E SS
Sbjct: 308  ENGDGDNKNETKKTKCDEVSS 328


>emb|CAN75735.1| hypothetical protein VITISV_030149 [Vitis vinifera]
          Length = 326

 Score =  331 bits (848), Expect = 3e-88
 Identities = 173/277 (62%), Positives = 204/277 (73%)
 Frame = -2

Query: 1127 WDEKLSSLTEAEKLKLIETXXXXXXXXXXXXXXXXXXKIEKLERAKLDGQKIVVDLEFTD 948
            W+E L+S+ E E+ KLIE+                  K+++L  AK  GQ IVVDL+F+D
Sbjct: 63   WEEMLASVDEEERSKLIESRKGLRKERMEKRSEEREKKVQRLTNAKEHGQNIVVDLDFSD 122

Query: 947  LMTGNEINSLVHQIMYCYAVNGRCDSPAHLWLTGCRGEIQTQLQRLPGFDKWFIEKESRS 768
            LMT NEINSLV QIMYCYAVN RC SP HLWLTGC G++ +QLQRLPGFDKW IEKE++S
Sbjct: 123  LMTPNEINSLVQQIMYCYAVNRRCASPCHLWLTGCNGKMGSQLQRLPGFDKWIIEKENQS 182

Query: 767  YIDALEQQKENLVYLTADAETVLDELDPKKIYIIGGLVDRNRWKGITMNKAKDQGISTAK 588
            YI+AL+ +K NLVYLTAD+ET+LDELDPKKIYI+GGLVDRNRWKGITM KA++QGI TAK
Sbjct: 183  YIEALQDEKHNLVYLTADSETILDELDPKKIYIVGGLVDRNRWKGITMKKAQEQGIQTAK 242

Query: 587  LPIGSFLKMSSSQVLTVNQVVEILLRFLETRDWKTSFFQVIPQRKRCEAEVEVQDTEDVD 408
            LPIG++LKMSSSQVLTVNQV+EILL+FLET+DWK SFFQVIPQRKR  A     D+ED  
Sbjct: 243  LPIGNYLKMSSSQVLTVNQVIEILLKFLETKDWKASFFQVIPQRKRGGA-----DSEDCQ 297

Query: 407  IEPKKKCTERSSYTETEVQETEGSDVEAKKKCTEQPS 297
             E +          E E  E     +E KK  TE PS
Sbjct: 298  GEVE----------EGEENEEGEDQLEMKKMRTESPS 324


>ref|XP_002533399.1| RNA (guanine-9-) methyltransferase domain containing, putative
            [Ricinus communis] gi|223526758|gb|EEF28985.1| RNA
            (guanine-9-) methyltransferase domain containing,
            putative [Ricinus communis]
          Length = 332

 Score =  330 bits (846), Expect = 5e-88
 Identities = 170/276 (61%), Positives = 203/276 (73%)
 Frame = -2

Query: 1127 WDEKLSSLTEAEKLKLIETXXXXXXXXXXXXXXXXXXKIEKLERAKLDGQKIVVDLEFTD 948
            W E L++++E E+ KLIE+                  KI++L  AK +GQKIVVDLEF+ 
Sbjct: 71   WQETLATVSEEERTKLIESRQQLRKERMEKRSEERENKIQRLTEAKSNGQKIVVDLEFSH 130

Query: 947  LMTGNEINSLVHQIMYCYAVNGRCDSPAHLWLTGCRGEIQTQLQRLPGFDKWFIEKESRS 768
            LMT +EI+SLV QIMYCYAVNGRC  P HLWLTGC GE++ QL RLPGFDKW IEKESRS
Sbjct: 131  LMTSSEIHSLVQQIMYCYAVNGRCALPCHLWLTGCNGEMENQLGRLPGFDKWMIEKESRS 190

Query: 767  YIDALEQQKENLVYLTADAETVLDELDPKKIYIIGGLVDRNRWKGITMNKAKDQGISTAK 588
            Y++AL+  KE+LVYLTADAETVLDELD KK+YI+GGLVDRNRWKG+TM KA++QGI TAK
Sbjct: 191  YMEALQDHKESLVYLTADAETVLDELDLKKVYIVGGLVDRNRWKGLTMKKAQEQGIQTAK 250

Query: 587  LPIGSFLKMSSSQVLTVNQVVEILLRFLETRDWKTSFFQVIPQRKRCEAEVEVQDTEDVD 408
            LPIGS++KMSSSQVLTVNQV+EILL+FLETRDWK SFFQVIPQRKR     +   T D +
Sbjct: 251  LPIGSYMKMSSSQVLTVNQVIEILLKFLETRDWKASFFQVIPQRKR----YDTGSTGDQE 306

Query: 407  IEPKKKCTERSSYTETEVQETEGSDVEAKKKCTEQP 300
            I+ +            E +E +    E KKKC E P
Sbjct: 307  IDGE------------ECEENKDEPYEKKKKCLEVP 330


>ref|XP_002322499.1| predicted protein [Populus trichocarpa] gi|222867129|gb|EEF04260.1|
            predicted protein [Populus trichocarpa]
          Length = 266

 Score =  329 bits (844), Expect = 9e-88
 Identities = 171/252 (67%), Positives = 198/252 (78%), Gaps = 1/252 (0%)
 Frame = -2

Query: 1127 WDEKLSSL-TEAEKLKLIETXXXXXXXXXXXXXXXXXXKIEKLERAKLDGQKIVVDLEFT 951
            W+EKLSS  +E E+LKLIE+                  K ++L +AK  GQ IV+DLEF 
Sbjct: 16   WEEKLSSCASEEERLKLIESRRELRKERMGKRAEEKEEKTQRLRKAKEFGQNIVIDLEFA 75

Query: 950  DLMTGNEINSLVHQIMYCYAVNGRCDSPAHLWLTGCRGEIQTQLQRLPGFDKWFIEKESR 771
            DLMT  EI+SLV QI+YCYAVNGRC SP HLWLTGCRGE++ QLQRLPGFDKW IEKES+
Sbjct: 76   DLMTNIEIHSLVQQIIYCYAVNGRCASPGHLWLTGCRGEMENQLQRLPGFDKWSIEKESQ 135

Query: 770  SYIDALEQQKENLVYLTADAETVLDELDPKKIYIIGGLVDRNRWKGITMNKAKDQGISTA 591
            SYI+AL+ QKENLVYLTAD+ETVLDELD KKIYI+GGLVDRNRWKG+TM KA +QGI TA
Sbjct: 136  SYIEALQDQKENLVYLTADSETVLDELDLKKIYIVGGLVDRNRWKGLTMKKANEQGIQTA 195

Query: 590  KLPIGSFLKMSSSQVLTVNQVVEILLRFLETRDWKTSFFQVIPQRKRCEAEVEVQDTEDV 411
            KLPI S+LKMSSSQVLTVNQVVEILL+F+ET+DWKTSFFQVIPQRKR   E + ++ E V
Sbjct: 196  KLPISSYLKMSSSQVLTVNQVVEILLKFVETKDWKTSFFQVIPQRKR--GETDPEELERV 253

Query: 410  DIEPKKKCTERS 375
            D E  +   E S
Sbjct: 254  DREELEDGNEPS 265


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