BLASTX nr result
ID: Coptis23_contig00011882
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00011882
(896 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002270524.1| PREDICTED: U-box domain-containing protein 1... 235 9e-60
ref|XP_003556245.1| PREDICTED: U-box domain-containing protein 1... 217 3e-54
ref|XP_003535520.1| PREDICTED: U-box domain-containing protein 1... 212 8e-53
ref|XP_002529604.1| E3 ubiquitin ligase PUB14, putative [Ricinus... 212 8e-53
ref|XP_002311996.1| predicted protein [Populus trichocarpa] gi|2... 211 1e-52
>ref|XP_002270524.1| PREDICTED: U-box domain-containing protein 14 [Vitis vinifera]
Length = 628
Score = 235 bits (600), Expect = 9e-60
Identities = 120/151 (79%), Positives = 131/151 (86%)
Frame = -1
Query: 896 IPALINLLCQGSPRGKKDAATAIFNLSIYQGNKVRAVRAGIVVPLMRLLMDAGGGMVDEA 717
IPALI+LLCQG+PRGKKDAATAIFNL+IYQGNKVRAVRAGIVVPLMR L DAGGGMVDEA
Sbjct: 470 IPALIDLLCQGTPRGKKDAATAIFNLAIYQGNKVRAVRAGIVVPLMRFLKDAGGGMVDEA 529
Query: 716 LAILAILASHQEGKMVIGQAEPIPILVEVIKSGSPRNRENAAAVLWSLCTGDVQHIKSXX 537
LAILAILASHQEGK+ IGQAEP P+LVEVIK+GSPRNRENAAAVLWSLCTGD QH+K
Sbjct: 530 LAILAILASHQEGKLAIGQAEPFPVLVEVIKTGSPRNRENAAAVLWSLCTGDAQHLKIAR 589
Query: 536 XXXXXXXXXXXXEHGTDRAKRKAGNLLELVR 444
E+GTDRAKRKAGN+LEL++
Sbjct: 590 ELGAEEALKELSENGTDRAKRKAGNILELLQ 620
Score = 67.8 bits (164), Expect = 3e-09
Identities = 37/108 (34%), Positives = 62/108 (57%)
Frame = -1
Query: 896 IPALINLLCQGSPRGKKDAATAIFNLSIYQGNKVRAVRAGIVVPLMRLLMDAGGGMVDEA 717
IP L+ LL PR ++ A TA+ NLSI + NK V +G + ++ +L + A
Sbjct: 388 IPRLVELLSSTDPRTQEHAVTALLNLSINEANKGSIVISGAIPDIVDVLKTGSMEARENA 447
Query: 716 LAILAILASHQEGKMVIGQAEPIPILVEVIKSGSPRNRENAAAVLWSL 573
A L L+ E K++IG A IP L++++ G+PR +++AA +++L
Sbjct: 448 AATLFSLSVIDENKVIIGAAGAIPALIDLLCQGTPRGKKDAATAIFNL 495
>ref|XP_003556245.1| PREDICTED: U-box domain-containing protein 14-like [Glycine max]
Length = 631
Score = 217 bits (553), Expect = 3e-54
Identities = 111/151 (73%), Positives = 127/151 (84%)
Frame = -1
Query: 896 IPALINLLCQGSPRGKKDAATAIFNLSIYQGNKVRAVRAGIVVPLMRLLMDAGGGMVDEA 717
IPALI LLC+G+PRGKKDAATAIFNLSIYQGNK RAV+AGIVVPL++ L DAGGGMVDEA
Sbjct: 470 IPALIKLLCEGTPRGKKDAATAIFNLSIYQGNKARAVKAGIVVPLIQFLKDAGGGMVDEA 529
Query: 716 LAILAILASHQEGKMVIGQAEPIPILVEVIKSGSPRNRENAAAVLWSLCTGDVQHIKSXX 537
LAI+AILASH EG++ IGQAEPIPILVEVI++GSPRNRENAAAVLWSLCTGD +K
Sbjct: 530 LAIMAILASHHEGRVAIGQAEPIPILVEVIRTGSPRNRENAAAVLWSLCTGDPLQLKLAK 589
Query: 536 XXXXXXXXXXXXEHGTDRAKRKAGNLLELVR 444
E+GTDRAKRKAG++LEL++
Sbjct: 590 EHGAEAALQELSENGTDRAKRKAGSILELLQ 620
Score = 69.7 bits (169), Expect = 9e-10
Identities = 38/108 (35%), Positives = 63/108 (58%)
Frame = -1
Query: 896 IPALINLLCQGSPRGKKDAATAIFNLSIYQGNKVRAVRAGIVVPLMRLLMDAGGGMVDEA 717
IP L++LL PR ++ A TA+ NLSI + NK V AG + ++ +L + + A
Sbjct: 388 IPPLVDLLSSSDPRTQEHAVTALLNLSINESNKGTIVNAGAIPDIVDVLKNGSMEARENA 447
Query: 716 LAILAILASHQEGKMVIGQAEPIPILVEVIKSGSPRNRENAAAVLWSL 573
A L L+ E K+ IG A IP L++++ G+PR +++AA +++L
Sbjct: 448 AATLFSLSVLDENKVQIGAAGAIPALIKLLCEGTPRGKKDAATAIFNL 495
>ref|XP_003535520.1| PREDICTED: U-box domain-containing protein 14-like [Glycine max]
Length = 632
Score = 212 bits (540), Expect = 8e-53
Identities = 109/151 (72%), Positives = 125/151 (82%)
Frame = -1
Query: 896 IPALINLLCQGSPRGKKDAATAIFNLSIYQGNKVRAVRAGIVVPLMRLLMDAGGGMVDEA 717
IPALI LLC+G+PRGKKDAATAIFNLSIYQGNK RAV+AGIV PL++ L DAGGGMVDEA
Sbjct: 471 IPALIKLLCEGTPRGKKDAATAIFNLSIYQGNKARAVKAGIVAPLIQFLTDAGGGMVDEA 530
Query: 716 LAILAILASHQEGKMVIGQAEPIPILVEVIKSGSPRNRENAAAVLWSLCTGDVQHIKSXX 537
LAI+AILASH EG++ IGQAEPI ILVEVI++GSPRNRENAAAVLWSLCTGD +K
Sbjct: 531 LAIMAILASHHEGRVAIGQAEPIHILVEVIRTGSPRNRENAAAVLWSLCTGDPLQLKLAK 590
Query: 536 XXXXXXXXXXXXEHGTDRAKRKAGNLLELVR 444
E+GTDRAKRKAG++LEL++
Sbjct: 591 EHGAEAALQELSENGTDRAKRKAGSILELLQ 621
Score = 69.7 bits (169), Expect = 9e-10
Identities = 38/108 (35%), Positives = 63/108 (58%)
Frame = -1
Query: 896 IPALINLLCQGSPRGKKDAATAIFNLSIYQGNKVRAVRAGIVVPLMRLLMDAGGGMVDEA 717
IP L++LL PR ++ A TA+ NLSI + NK V AG + ++ +L + + A
Sbjct: 389 IPPLVDLLSSSDPRTQEHAVTALLNLSINESNKGTIVNAGAIPDIVDVLKNGSMEARENA 448
Query: 716 LAILAILASHQEGKMVIGQAEPIPILVEVIKSGSPRNRENAAAVLWSL 573
A L L+ E K+ IG A IP L++++ G+PR +++AA +++L
Sbjct: 449 AATLFSLSVLDENKVQIGAAGAIPALIKLLCEGTPRGKKDAATAIFNL 496
>ref|XP_002529604.1| E3 ubiquitin ligase PUB14, putative [Ricinus communis]
gi|223530937|gb|EEF32796.1| E3 ubiquitin ligase PUB14,
putative [Ricinus communis]
Length = 575
Score = 212 bits (540), Expect = 8e-53
Identities = 110/151 (72%), Positives = 126/151 (83%)
Frame = -1
Query: 896 IPALINLLCQGSPRGKKDAATAIFNLSIYQGNKVRAVRAGIVVPLMRLLMDAGGGMVDEA 717
+PALI+LL +G+PRGKKDAATAIFNLSIYQGNK RAV+AGIV LM+LL D GGGMVDEA
Sbjct: 414 MPALIDLLREGTPRGKKDAATAIFNLSIYQGNKARAVKAGIVPSLMQLLKDPGGGMVDEA 473
Query: 716 LAILAILASHQEGKMVIGQAEPIPILVEVIKSGSPRNRENAAAVLWSLCTGDVQHIKSXX 537
LAILAILASHQEGK+ IGQA+PIP+LVEVI++GSPRNRENAAAVLWSLC GD+Q +K
Sbjct: 474 LAILAILASHQEGKVAIGQAKPIPVLVEVIRTGSPRNRENAAAVLWSLCAGDLQQLKLAK 533
Query: 536 XXXXXXXXXXXXEHGTDRAKRKAGNLLELVR 444
E GTDRAKRKAG+LLEL++
Sbjct: 534 ESGAEEALKELSESGTDRAKRKAGSLLELIQ 564
>ref|XP_002311996.1| predicted protein [Populus trichocarpa] gi|222851816|gb|EEE89363.1|
predicted protein [Populus trichocarpa]
Length = 628
Score = 211 bits (538), Expect = 1e-52
Identities = 108/151 (71%), Positives = 122/151 (80%)
Frame = -1
Query: 896 IPALINLLCQGSPRGKKDAATAIFNLSIYQGNKVRAVRAGIVVPLMRLLMDAGGGMVDEA 717
IPALI LLC G+PRGKKDAATAIFNLSIYQGNK RAV+AGIV PLMRLL DAGGGMVDEA
Sbjct: 469 IPALIKLLCDGTPRGKKDAATAIFNLSIYQGNKARAVKAGIVPPLMRLLRDAGGGMVDEA 528
Query: 716 LAILAILASHQEGKMVIGQAEPIPILVEVIKSGSPRNRENAAAVLWSLCTGDVQHIKSXX 537
LAILAILA HQEGK+ IGQ +PIP+L+EVI++GS RNRENA A+LWSLCTGD Q +
Sbjct: 529 LAILAILAGHQEGKVAIGQVDPIPVLIEVIRTGSQRNRENAVAILWSLCTGDSQQLILAK 588
Query: 536 XXXXXXXXXXXXEHGTDRAKRKAGNLLELVR 444
E GTDRAKRKAG++LEL++
Sbjct: 589 QFGAEEALKELSESGTDRAKRKAGSILELLQ 619
Score = 66.6 bits (161), Expect = 7e-09
Identities = 37/108 (34%), Positives = 61/108 (56%)
Frame = -1
Query: 896 IPALINLLCQGSPRGKKDAATAIFNLSIYQGNKVRAVRAGIVVPLMRLLMDAGGGMVDEA 717
+P L+ LL PR ++ A TA+ NLSI NK V AG + ++ +L + + A
Sbjct: 387 VPLLVELLSSTDPRTQEHAVTALLNLSINDLNKGTIVNAGAIPDIVDVLKNGSMEARENA 446
Query: 716 LAILAILASHQEGKMVIGQAEPIPILVEVIKSGSPRNRENAAAVLWSL 573
A L L+ E K+ IG A IP L++++ G+PR +++AA +++L
Sbjct: 447 AATLFSLSVIDENKVAIGAAGAIPALIKLLCDGTPRGKKDAATAIFNL 494