BLASTX nr result
ID: Coptis23_contig00011863
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00011863
(1516 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002275430.1| PREDICTED: pseudouridine kinase [Vitis vinif... 427 e-117
ref|XP_002306090.1| predicted protein [Populus trichocarpa] gi|2... 397 e-108
ref|XP_003607889.1| Sugar kinase, putative [Medicago truncatula]... 395 e-107
ref|XP_003556290.1| PREDICTED: pseudouridine kinase-like [Glycin... 388 e-105
emb|CAN61115.1| hypothetical protein VITISV_035585 [Vitis vinifera] 388 e-105
>ref|XP_002275430.1| PREDICTED: pseudouridine kinase [Vitis vinifera]
gi|297744710|emb|CBI37972.3| unnamed protein product
[Vitis vinifera]
Length = 426
Score = 427 bits (1097), Expect = e-117
Identities = 212/333 (63%), Positives = 267/333 (80%)
Frame = +3
Query: 3 MISIIGHDMAGNLLMEYWKSAGLSTEGIEKRQDIGTPVVCNLFDTNGELTAAVASVEAIE 182
MIS +G DMAGN+L+E+WKSA LS EGI K DI T VVC++FD +GEL A VASVEAIE
Sbjct: 95 MISALGLDMAGNMLLEHWKSARLSMEGIRKHHDIQTSVVCHIFDGDGELAAGVASVEAIE 154
Query: 183 KYLTQEWIQKFSCSISSAPVLMIDANLNPHSLEASCKIAAESNIPVWFEPVSVTKSKRVA 362
+LT +WI++F C+I SAPVLM+DANL+P +LEASC++AAES+ PVWFEPVSV KS+RVA
Sbjct: 155 NFLTSDWIRQFKCNICSAPVLMVDANLSPSALEASCQMAAESSTPVWFEPVSVIKSRRVA 214
Query: 363 SIASYVTFTSPNEDELIAMANAMSPQDRFFPVQTSKGGSKQSIEGLFQMLKPAVLVLLEK 542
S+A Y+TF SPNEDELIAMANA+S +D F P+Q G+K SIE LFQMLKPA+LVLLEK
Sbjct: 215 SVAKYITFASPNEDELIAMANALSCKDVFHPIQRDYVGTKCSIESLFQMLKPAILVLLEK 274
Query: 543 GVKIVVVTLGADGVFICSKDGPGFIKNHLRKTKPSASGRRLFEMVTVNCPSNKFACDNKF 722
G+K+VV+TLG+DGVF+CSK+GPGF+ N L+ TKP G +L+E++T +CPSN F +
Sbjct: 275 GIKVVVLTLGSDGVFLCSKEGPGFMNNVLKGTKPQGFGSQLYEIITESCPSNLF-LNIAT 333
Query: 723 EWRKSQLYAVHFPSLPTPVVRLTGAGDCLVGGTVASICAGLDVMQSMAVGIAAAKAGIQV 902
K+ +AVH P+LP V RLTGAGDCLVGGT+AS+CAGLDV+QS+A GIAAAKA ++
Sbjct: 334 SSSKTYPFAVHLPALPASVARLTGAGDCLVGGTLASMCAGLDVLQSVAAGIAAAKAAVEG 393
Query: 903 ETNVPSTYCLSTVAEDARLIYSLAKVVCDELLL 1001
ETNVPS Y L+ +A+DAR + S AKV+ +L
Sbjct: 394 ETNVPSEYSLAKIADDARRVCSSAKVISHRSML 426
>ref|XP_002306090.1| predicted protein [Populus trichocarpa] gi|222849054|gb|EEE86601.1|
predicted protein [Populus trichocarpa]
Length = 384
Score = 397 bits (1019), Expect = e-108
Identities = 202/334 (60%), Positives = 261/334 (78%), Gaps = 1/334 (0%)
Frame = +3
Query: 3 MISIIGHDMAGNLLMEYWKSAGLSTE-GIEKRQDIGTPVVCNLFDTNGELTAAVASVEAI 179
MIS +G+DMAG LL+E+W SA LSTE GI K QDI TPV+CN+FDT GEL AAVASVEA+
Sbjct: 54 MISALGNDMAGKLLLEHWNSASLSTEVGIMKHQDIKTPVICNIFDTEGELAAAVASVEAV 113
Query: 180 EKYLTQEWIQKFSCSISSAPVLMIDANLNPHSLEASCKIAAESNIPVWFEPVSVTKSKRV 359
EK+LT WIQ+ +I APV+M+DANL+ +LEASC++AAESN PVWFEPVSV KS+R+
Sbjct: 114 EKFLTSSWIQQSKQNIFCAPVMMVDANLSLPALEASCQLAAESNTPVWFEPVSVAKSRRI 173
Query: 360 ASIASYVTFTSPNEDELIAMANAMSPQDRFFPVQTSKGGSKQSIEGLFQMLKPAVLVLLE 539
S+A YVTF SPNEDELIAMANA+S ++ F ++ S+ S+E LFQ LKPA+LVLLE
Sbjct: 174 VSVAKYVTFASPNEDELIAMANALSHENMFRHIERD-SNSRCSVESLFQFLKPAILVLLE 232
Query: 540 KGVKIVVVTLGADGVFICSKDGPGFIKNHLRKTKPSASGRRLFEMVTVNCPSNKFACDNK 719
KG+KIV VTLGADGVF+CS+ GP ++ L +TK +L++ V +CPS++F+ +
Sbjct: 233 KGIKIVAVTLGADGVFLCSR-GPNVVRFSLDRTKKYGVSGQLYDKVVSSCPSSRFSGALQ 291
Query: 720 FEWRKSQLYAVHFPSLPTPVVRLTGAGDCLVGGTVASICAGLDVMQSMAVGIAAAKAGIQ 899
E R S L++VHFP+LP VVRLTGAGDCLVGGT+AS+C+GLD+MQS+AVGIAAAK+ ++
Sbjct: 292 IE-RSSHLFSVHFPALPASVVRLTGAGDCLVGGTLASLCSGLDIMQSIAVGIAAAKSAVE 350
Query: 900 VETNVPSTYCLSTVAEDARLIYSLAKVVCDELLL 1001
E NVPS + L+T+ +DAR IYS AK+ + +L
Sbjct: 351 GEANVPSEFSLATITDDARSIYSAAKIPFHQSML 384
>ref|XP_003607889.1| Sugar kinase, putative [Medicago truncatula]
gi|85719355|gb|ABC75360.1| Carbohydrate kinase, PfkB
[Medicago truncatula] gi|355508944|gb|AES90086.1| Sugar
kinase, putative [Medicago truncatula]
Length = 421
Score = 395 bits (1016), Expect = e-107
Identities = 198/333 (59%), Positives = 258/333 (77%)
Frame = +3
Query: 3 MISIIGHDMAGNLLMEYWKSAGLSTEGIEKRQDIGTPVVCNLFDTNGELTAAVASVEAIE 182
MIS +G DMAGNLL+E+WK+AGLSTEGI K +DI TPVVCN+FD NGE+ A VASVEA+E
Sbjct: 90 MISALGFDMAGNLLLEHWKTAGLSTEGILKNKDIETPVVCNIFDVNGEVAAGVASVEALE 149
Query: 183 KYLTQEWIQKFSCSISSAPVLMIDANLNPHSLEASCKIAAESNIPVWFEPVSVTKSKRVA 362
KYLT +WI F ++ APVLM+DANL+ SLEASCK+AA++ PVWFEPVSVTKS+R+
Sbjct: 150 KYLTPDWILCFKSTLLYAPVLMVDANLSGPSLEASCKMAADTGCPVWFEPVSVTKSQRIR 209
Query: 363 SIASYVTFTSPNEDELIAMANAMSPQDRFFPVQTSKGGSKQSIEGLFQMLKPAVLVLLEK 542
S+A YVTF SPNEDELIAMANA+S + F P++ S LFQ+LKPAVLVLL K
Sbjct: 210 SVAKYVTFASPNEDELIAMANALSGSNEFRPLKEDHKKDNLSPGSLFQILKPAVLVLLGK 269
Query: 543 GVKIVVVTLGADGVFICSKDGPGFIKNHLRKTKPSASGRRLFEMVTVNCPSNKFACDNKF 722
G+K+V+VTLG++GVF+CSK GP K + KT + G +L++ V NCP N ++ ++
Sbjct: 270 GIKVVLVTLGSNGVFLCSKGGPSCYKFPVAKTNRTGFGGQLYKSVMQNCPPNCYSGFSEL 329
Query: 723 EWRKSQLYAVHFPSLPTPVVRLTGAGDCLVGGTVASICAGLDVMQSMAVGIAAAKAGIQV 902
+ ++L+AVH PSLP VVRLTGAGDCLVGGT+ SICAGLD+MQS++VGIA AKA ++V
Sbjct: 330 D-ISNRLFAVHLPSLPASVVRLTGAGDCLVGGTLTSICAGLDIMQSVSVGIAVAKAAVEV 388
Query: 903 ETNVPSTYCLSTVAEDARLIYSLAKVVCDELLL 1001
ETNVPS + L+++A+DAR ++ AKV+ + ++
Sbjct: 389 ETNVPSAFSLASIADDARSVFCHAKVLLQQSMM 421
>ref|XP_003556290.1| PREDICTED: pseudouridine kinase-like [Glycine max]
Length = 390
Score = 388 bits (997), Expect = e-105
Identities = 198/333 (59%), Positives = 252/333 (75%)
Frame = +3
Query: 3 MISIIGHDMAGNLLMEYWKSAGLSTEGIEKRQDIGTPVVCNLFDTNGELTAAVASVEAIE 182
MIS +G DMAGNLL+ WKSAGLS EGI K +DI TPVVCN+FD NGE+ A VASVEA E
Sbjct: 60 MISALGFDMAGNLLLNQWKSAGLSIEGILKDKDIETPVVCNIFDVNGEVAAGVASVEAFE 119
Query: 183 KYLTQEWIQKFSCSISSAPVLMIDANLNPHSLEASCKIAAESNIPVWFEPVSVTKSKRVA 362
KYLT +WI +F ++ SAPVLM+DANL+ SLEA+CK+A + PVWFEPVSVTKS+R++
Sbjct: 120 KYLTPDWIFRFKNTLLSAPVLMVDANLSHPSLEAACKMAIDMECPVWFEPVSVTKSRRIS 179
Query: 363 SIASYVTFTSPNEDELIAMANAMSPQDRFFPVQTSKGGSKQSIEGLFQMLKPAVLVLLEK 542
SI YVTF SPNEDELIAMANA+S D F P++ S+ S+ LFQMLKPA+ VLLEK
Sbjct: 180 SIVEYVTFASPNEDELIAMANALSGSDEFHPLKESQ-KKNISVLSLFQMLKPAIWVLLEK 238
Query: 543 GVKIVVVTLGADGVFICSKDGPGFIKNHLRKTKPSASGRRLFEMVTVNCPSNKFACDNKF 722
G+K+V+VT G++GVF+C+K P K KT +LF+ V CP ++++ ++
Sbjct: 239 GIKVVLVTFGSNGVFLCNKGWPRQFKMPAEKTNQCGFRGQLFKTVMQKCPPSRYSGFSEL 298
Query: 723 EWRKSQLYAVHFPSLPTPVVRLTGAGDCLVGGTVASICAGLDVMQSMAVGIAAAKAGIQV 902
+ R S L+AVHFPSLP VVRLTGAGDCLVGGT+ SICAGLD+MQS++VGIA AKA ++V
Sbjct: 299 D-RSSHLFAVHFPSLPASVVRLTGAGDCLVGGTLTSICAGLDIMQSVSVGIAVAKAVVEV 357
Query: 903 ETNVPSTYCLSTVAEDARLIYSLAKVVCDELLL 1001
E NVPST+ LS + +DA+ +YS AKV+ + +L
Sbjct: 358 EANVPSTFSLSAITDDAKSVYSGAKVLFPQSML 390
>emb|CAN61115.1| hypothetical protein VITISV_035585 [Vitis vinifera]
Length = 731
Score = 388 bits (996), Expect = e-105
Identities = 193/303 (63%), Positives = 242/303 (79%), Gaps = 2/303 (0%)
Frame = +3
Query: 81 GIEKRQDIGTPVVCNLFDTNGELTAAVASVEAIEKYLTQEWIQKFSCSISSAPVLMIDAN 260
GI K DI T VVC++FD +GE+ A VASVEAIE +LT +WI++F C+I SAPVLM+DAN
Sbjct: 14 GIRKHHDIQTSVVCHIFDGDGEVAAGVASVEAIENFLTSDWIRQFKCNICSAPVLMVDAN 73
Query: 261 LNPHSLEASCKIAAESNIPVWFEPVSVTKSKRVASIASYVTFTSPNEDELIAMANAMSPQ 440
L+P +LEASC++AAES+ PVWFEPVSV KS+RVAS+A Y+TF SPNEDELIAMANA+S +
Sbjct: 74 LSPSALEASCQMAAESSTPVWFEPVSVIKSRRVASVAKYITFASPNEDELIAMANALSCK 133
Query: 441 DRFFPVQTSKGGSKQSIEGLFQMLKPAVLVLLEKGVKIVVVTLGADGVFICSKDGPGFIK 620
D F P+Q G+K SIE LFQMLKPA+LVLLEKG+K+VV+TLG+DGVF+CSK+GPGF+
Sbjct: 134 DVFHPIQRDXVGTKCSIESLFQMLKPAILVLLEKGIKVVVLTLGSDGVFLCSKEGPGFMN 193
Query: 621 NHLRKTKPSASGRRLFEMVTVNCPSNKFACDNKFEWRKSQLY--AVHFPSLPTPVVRLTG 794
N L+ TKP G +L+E++T +CPSN F S+ Y AVH P+LP V RLTG
Sbjct: 194 NVLKGTKPQGFGSQLYEIITESCPSNLFL---NIATSSSKXYPXAVHLPALPAXVARLTG 250
Query: 795 AGDCLVGGTVASICAGLDVMQSMAVGIAAAKAGIQVETNVPSTYCLSTVAEDARLIYSLA 974
AGDCLVGGT+AS+CAGLDV+QS+A GIAAAKA ++ ETNVPS Y L+ +A+DAR + S A
Sbjct: 251 AGDCLVGGTLASMCAGLDVLQSVAAGIAAAKAAVEGETNVPSEYSLAKIADDARRVCSSA 310
Query: 975 KVV 983
KV+
Sbjct: 311 KVI 313