BLASTX nr result

ID: Coptis23_contig00011843 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00011843
         (1435 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK24693.1| unknown [Picea sitchensis]                             252   2e-64
ref|XP_003525958.1| PREDICTED: DAZ-associated protein 1-like [Gl...   251   3e-64
ref|XP_003523630.1| PREDICTED: DAZ-associated protein 1-like [Gl...   243   9e-62
ref|XP_002300356.1| predicted protein [Populus trichocarpa] gi|2...   239   1e-60
ref|XP_002529044.1| Heterogeneous nuclear ribonucleoprotein 27C,...   238   3e-60

>gb|ABK24693.1| unknown [Picea sitchensis]
          Length = 476

 Score =  252 bits (643), Expect = 2e-64
 Identities = 136/259 (52%), Positives = 170/259 (65%), Gaps = 14/259 (5%)
 Frame = -3

Query: 1346 MESDQGKLFVGGISFETKEETLRDHFSKYGEVIDTVIMRDRATSRPRGFGFVVFADPSVV 1167
            M+SD  K+F+GGIS+ET EE LRD+FSKYGEV+ TVIM+DR T R RGFGFVVF+DPS+V
Sbjct: 1    MDSDHCKIFIGGISWETSEERLRDYFSKYGEVVQTVIMKDRLTGRARGFGFVVFSDPSIV 60

Query: 1166 DQALEENHVICSRTVEVKKAVPRGEQHQHYHNSNQEQHSRGFGRKXXXXXXXXNTQFRSK 987
            D AL+E H I  R VE KKAVPR EQ     NS     S+G+G              R+K
Sbjct: 61   DIALQEKHTIDGRAVEAKKAVPRSEQQNTRTNSYNNNDSQGYG----------GGSVRTK 110

Query: 986  KIFVGGLSASVTEEEFRGYFEKFGRITDVVVMYDSTTHRPRGFGFITFDSEEAVESVMQN 807
            KIFVGGL A++TEE+F+ YF++FG ITDVVVMYD  T RPRGFGFI+FDSE+AVESV+Q 
Sbjct: 111  KIFVGGLPANLTEEDFKNYFQQFGNITDVVVMYDHNTQRPRGFGFISFDSEDAVESVLQK 170

Query: 806  NFHELNNKSVEVKRAVPKDAA-------------HNSGRNHTNSHNMR-NGEXXXXXXXX 669
            +FH+LN K VEVKRA+PKDA+             +N+  ++T  +  R +          
Sbjct: 171  SFHQLNEKLVEVKRALPKDASPGAAGRGAGGYQGYNNSTSNTGGYEGRMDNNRYGQPPPA 230

Query: 668  XXXXYPTYNPMYNLYTGYG 612
                +P+Y P     TGYG
Sbjct: 231  GRGGFPSYGP-----TGYG 244


>ref|XP_003525958.1| PREDICTED: DAZ-associated protein 1-like [Glycine max]
          Length = 378

 Score =  251 bits (642), Expect = 3e-64
 Identities = 158/388 (40%), Positives = 211/388 (54%), Gaps = 23/388 (5%)
 Frame = -3

Query: 1349 KMESDQGKLFVGGISFETKEETLRDHFSKYGEVIDTVIMRDRATSRPRGFGFVVFADPSV 1170
            KM+SD+ KLFVGGIS +T E+ L+ HF+KYG V D+ I  DR T  PRGFGFV F+D S 
Sbjct: 4    KMDSDRAKLFVGGISRDTTEDVLKLHFAKYGVVSDSTISVDRTTRSPRGFGFVTFSDLSA 63

Query: 1169 VDQALEENHVICSRTVEVKKAVPRGEQHQH----------YHNSNQEQHSRGFGRKXXXX 1020
             D+AL++ HVI  RTVEVKKA+PR EQHQH          Y+N+N   ++          
Sbjct: 64   ADKALQDTHVILGRTVEVKKAIPRSEQHQHQNQLQSRVGGYYNNNNNNNNN------YSN 117

Query: 1019 XXXXNTQFRSKKIFVGGLSASVTEEEFRGYFEKFGRITDVVVMYDSTTHRPRGFGFITFD 840
                +   R+KKIFVGGL A ++EEEF+ YFE+FGRITDVVVM DS THRPRGFGFITF+
Sbjct: 118  DCSSDYNVRTKKIFVGGLPAGISEEEFKNYFERFGRITDVVVMQDSVTHRPRGFGFITFE 177

Query: 839  SEEAVESVMQNNFHELNNKSVEVKRAVPKDAAHNSGRNHTNSHNMRNGEXXXXXXXXXXX 660
            SE++V++VM  +FH+LN + VEVKRAVPK+  H     +      RN             
Sbjct: 178  SEDSVQNVMVKSFHDLNGRQVEVKRAVPKEGNH----GYDGFSKFRN-----KSERGVPK 228

Query: 659  XYPTYNPMYNLYTGYGPRP----------VASXXXXXXXXXXXXXXXXXXXXXXPRSPWN 510
              P Y+P  N++ G+ P P           ++                      PR+ W 
Sbjct: 229  SLPPYSPR-NMFPGFSPSPWYSGDGVYAYGSNAYGCWYPVGGYGGNGYAVLCDAPRNFWY 287

Query: 509  GPGIVGLRRGLVPYVNA-PFHPXXXXXXXXXXXGMTTTDYHGIMGPDTNGKWNQGSSGDM 333
            GP + G +   VPY +A P              G  +  Y GI+GP TN K++Q  + + 
Sbjct: 288  GPMMTGPQACQVPYTSAVPDVVYVGGRIGVVGSGAGSWGYSGILGPATNLKFDQAFNANG 347

Query: 332  QLSAGTSPMRLDGGISED--DSSGLMGS 255
             +    + +    G+ +D  DSS L GS
Sbjct: 348  FVPGNVTSLH---GVQQDVIDSSSLKGS 372


>ref|XP_003523630.1| PREDICTED: DAZ-associated protein 1-like [Glycine max]
          Length = 384

 Score =  243 bits (620), Expect = 9e-62
 Identities = 160/383 (41%), Positives = 204/383 (53%), Gaps = 18/383 (4%)
 Frame = -3

Query: 1349 KMESDQGKLFVGGISFETKEETLRDHFSKYGEVIDTVIMRDRATSRPRGFGFVVFADPSV 1170
            KM+SD  KLFVGGIS +T E  L+ HF+KYG V D+ I  DR T  PRGFGFV F+D S 
Sbjct: 4    KMDSDSAKLFVGGISRDTTEHVLKLHFAKYGVVSDSTISVDRTTRSPRGFGFVTFSDLSA 63

Query: 1169 VDQALEENHVICSRTVEVKKAVPRGEQHQH-----------YHNSNQEQHSRGFGRKXXX 1023
             D+AL++ HVI  RTVEVKKA+PR EQHQH           Y+N+N   +          
Sbjct: 64   ADKALQDTHVILGRTVEVKKAIPRSEQHQHQNPLQSRGGGYYYNNNNNNNDDNNNNSNDY 123

Query: 1022 XXXXXNTQFRSKKIFVGGLSASVTEEEFRGYFEKFGRITDVVVMYDSTTHRPRGFGFITF 843
                     R+KKIFVGGL A ++EEEF+ YFE+FGRITDVVVM DS THRPRGFGFITF
Sbjct: 124  CSDH---NVRTKKIFVGGLPAGISEEEFKNYFERFGRITDVVVMQDSVTHRPRGFGFITF 180

Query: 842  DSEEAVESVMQNNFHELNNKSVEVKRAVPKDAAHN-SGRNHTNSHNMRN-GEXXXXXXXX 669
            +SEE+V++VM  +FH+LN + VEVKRAVPK+  H   G +   + + R   +        
Sbjct: 181  ESEESVQNVMVKSFHDLNGRQVEVKRAVPKEGNHGYDGFSKLRNKSERGVPKSFPPFSHR 240

Query: 668  XXXXYPTYNPMYNLYTGYGPRPVASXXXXXXXXXXXXXXXXXXXXXXPRSP-WNGPGIVG 492
                 P + P+   Y+G G     S                        S  W GP + G
Sbjct: 241  DMLPLPGFTPL-PWYSGDGVYAYGSNAYGCWYPVGGYGGNGYAVPSDAPSNLWYGPMMTG 299

Query: 491  LRRGLVPYVNA-PFHPXXXXXXXXXXXGMTTTDYHGIMGPDTNGKWNQGSSGDMQLSAG- 318
             +   VPY +A P              G  +  Y GIMG  TN K++Q  + +  +    
Sbjct: 300  PQACQVPYASAVPNVVYVGGRIGIVGSGAGSWGYTGIMGSATNFKFDQAFNANEFVPGNV 359

Query: 317  TSPMRLDGGISED--DSSGLMGS 255
            TSP     G+ +D  DSS L GS
Sbjct: 360  TSP----HGVKQDVIDSSSLKGS 378


>ref|XP_002300356.1| predicted protein [Populus trichocarpa] gi|222847614|gb|EEE85161.1|
            predicted protein [Populus trichocarpa]
          Length = 478

 Score =  239 bits (610), Expect = 1e-60
 Identities = 123/213 (57%), Positives = 152/213 (71%)
 Frame = -3

Query: 1346 MESDQGKLFVGGISFETKEETLRDHFSKYGEVIDTVIMRDRATSRPRGFGFVVFADPSVV 1167
            MESD GKLF+GGIS++T EE L+++FSKYGEV++ VIMRDR T R RGFGFVVFADP V 
Sbjct: 1    MESDLGKLFIGGISWDTDEERLKEYFSKYGEVVEAVIMRDRVTGRARGFGFVVFADPIVA 60

Query: 1166 DQALEENHVICSRTVEVKKAVPRGEQHQHYHNSNQEQHSRGFGRKXXXXXXXXNTQFRSK 987
            ++ + E HV+  RTVE KKAVPR +QH    N++    S G G              R+K
Sbjct: 61   ERVIMEKHVVDGRTVEAKKAVPRDDQHILSRNTSSIHGSPGPG--------------RTK 106

Query: 986  KIFVGGLSASVTEEEFRGYFEKFGRITDVVVMYDSTTHRPRGFGFITFDSEEAVESVMQN 807
            KIFVGGL+++VTE +F+ YFE+FG ITDVVVMYD  T RPRGFGFIT+DSEEAV+ V+  
Sbjct: 107  KIFVGGLASTVTENDFKKYFEQFGIITDVVVMYDHNTLRPRGFGFITYDSEEAVDRVLHK 166

Query: 806  NFHELNNKSVEVKRAVPKDAAHNSGRNHTNSHN 708
             FHELN K VEVKRAVPK+ +    R+    +N
Sbjct: 167  TFHELNGKMVEVKRAVPKELSPGPSRSPLMGYN 199


>ref|XP_002529044.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
            communis] gi|223531524|gb|EEF33355.1| Heterogeneous
            nuclear ribonucleoprotein 27C, putative [Ricinus
            communis]
          Length = 478

 Score =  238 bits (607), Expect = 3e-60
 Identities = 120/213 (56%), Positives = 153/213 (71%)
 Frame = -3

Query: 1346 MESDQGKLFVGGISFETKEETLRDHFSKYGEVIDTVIMRDRATSRPRGFGFVVFADPSVV 1167
            MESD GKLF+GGIS++T EE L+++FSKYGEV++ VIMRDR T R RGFGFVVFADP+V 
Sbjct: 1    MESDLGKLFIGGISWDTDEERLKEYFSKYGEVVEAVIMRDRTTGRARGFGFVVFADPAVA 60

Query: 1166 DQALEENHVICSRTVEVKKAVPRGEQHQHYHNSNQEQHSRGFGRKXXXXXXXXNTQFRSK 987
            ++ + + H+I  RTVE KKAVPR +QH    N++    S G G              R+K
Sbjct: 61   ERVIVDKHMIDGRTVEAKKAVPRDDQHILNRNTSSIHGSPGPG--------------RTK 106

Query: 986  KIFVGGLSASVTEEEFRGYFEKFGRITDVVVMYDSTTHRPRGFGFITFDSEEAVESVMQN 807
            KIFVGGL+++VT+ +F+ YFE+FG ITDVVVMYD  T RPRGFGFIT+DSE+AV+ V+  
Sbjct: 107  KIFVGGLASTVTDNDFKKYFEQFGNITDVVVMYDHNTQRPRGFGFITYDSEDAVDRVLHK 166

Query: 806  NFHELNNKSVEVKRAVPKDAAHNSGRNHTNSHN 708
             FHELN K VEVKRAVPK+ +    R+    +N
Sbjct: 167  TFHELNGKMVEVKRAVPKELSPGPSRSPLIGYN 199


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