BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00011842
         (4032 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264260.1| PREDICTED: DNA excision repair protein ERCC-...  1068   0.0  
ref|XP_002516323.1| ATP binding protein, putative [Ricinus commu...  1040   0.0  
ref|XP_002309928.1| chromatin remodeling complex subunit [Populu...  1038   0.0  
ref|XP_002306264.1| chromatin remodeling complex subunit [Populu...  1023   0.0  
ref|XP_003532357.1| PREDICTED: DNA excision repair protein ERCC-...  1011   0.0  

>ref|XP_002264260.1| PREDICTED: DNA excision repair protein ERCC-6-like [Vitis vinifera]
            gi|296088517|emb|CBI37508.3| unnamed protein product
            [Vitis vinifera]
          Length = 1043

 Score = 1068 bits (2763), Expect = 0.0
 Identities = 543/824 (65%), Positives = 649/824 (78%), Gaps = 10/824 (1%)
 Frame = +1

Query: 1366 NTVDRINDNGTQKKGYSMKKIEIKPYDILKESSLVVDYDDEDPND----ILSSGESGKRV 1533
            N + R++ N    +  + +++ +    + + S    + ++ED N     ILS  +  +  
Sbjct: 217  NFISRVHGNRHNGEAANSRRVNVNSVPMGQSSVCDFEEEEEDGNSDDCVILSGKKVVEAA 276

Query: 1534 QSRAPRAKNEVKGSISVDALEDAGGDWVFEDGESIILTGKPSNYMLLGKIAKMLYPHQRS 1713
             SR  + K E   S  VD L+D     V ED  +I L+G  S Y L GKIAKMLYPHQR 
Sbjct: 277  VSRGSKFKEEYDDSDVVDVLDDCTDGSVLEDESAITLSGPRSTYKLPGKIAKMLYPHQRD 336

Query: 1714 GLRWLWSLHCKGTGGILGDDMGLGKTMQICSFLAGLFHSGLIKRAMIVAPKTLLSHWIKE 1893
            GL+WLWSLHC+G GGILGDDMGLGKTMQIC FLAGLFHS L++RA++VAPKTLLSHWIKE
Sbjct: 337  GLKWLWSLHCQGKGGILGDDMGLGKTMQICGFLAGLFHSCLLRRAVVVAPKTLLSHWIKE 396

Query: 1894 LTVVGLSEKIREYYGSCVKARQYELQYIFQDKGILLTTYDIVRNNFKSLRGDSYFDDDC- 2070
            L+ VGLSEK REYYG+C K RQYELQY+ QDKG+LLTTYDIVRNN KSL G +YF D   
Sbjct: 397  LSAVGLSEKTREYYGTCTKTRQYELQYVLQDKGVLLTTYDIVRNNSKSLCGGNYFHDKRS 456

Query: 2071 -EDIIWDYTILDEGHIIKNPSTQRAKSLLEIPSGHRIIISGTPIQNNLKELWALFSFCCP 2247
             +D  WDY ILDEGH+IKNPSTQRAKSL+EIP  HRI++SGTPIQNNLKELWALFSFCCP
Sbjct: 457  EDDFTWDYMILDEGHLIKNPSTQRAKSLMEIPCAHRIVVSGTPIQNNLKELWALFSFCCP 516

Query: 2248 ELLGDKKEFKVRYESAILRGNEKNATDREKRTGSAIAKELRERIEPYFLRRLKSEVFLEN 2427
            ELLGDK  FKV+YES ILRGN+KNA+DREK   S +AKELRERI+PYFLRRLK+EVF E+
Sbjct: 517  ELLGDKNWFKVKYESPILRGNDKNASDREKHISSRVAKELRERIQPYFLRRLKNEVFHED 576

Query: 2428 ESSKTSKLSKKNEIIVWLRMTQCQRQLYEAFLNSELVLSSFDGSPLAAITILKKICDHPY 2607
            ++S+T+KLSKKNEIIVWLR+T CQRQLYEAFLNSE+VLS+FDGSPLAAITILKKICDHP 
Sbjct: 577  DASETAKLSKKNEIIVWLRLTSCQRQLYEAFLNSEIVLSAFDGSPLAAITILKKICDHPL 636

Query: 2608 LLTKRAAEEVLEGMETMLDGNDLSLIEKMALQLANASDGEDLQNLVDNVSCKITFILSLL 2787
            LLTKRA E+VLEGM++ML+  DL +  K+A+ LA A + +D     DNVS K++FIL+LL
Sbjct: 637  LLTKRAVEDVLEGMDSMLNQEDLGMASKLAMHLATAYERDDFLEKNDNVSSKMSFILALL 696

Query: 2788 DNLIQEGHIVLIFSQTRKMLNFVQDAIISKGYKFLRIDGTTKISDREKIVNDFQEGEGAP 2967
            D LI EGH VLIFSQTRKMLN +++ +IS GYKFLRIDGTTK +DR KIVNDFQ+G GAP
Sbjct: 697  DTLIPEGHNVLIFSQTRKMLNLIEELLISNGYKFLRIDGTTKANDRVKIVNDFQDGVGAP 756

Query: 2968 IFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTI 3147
            IFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQ KDV+VYRLMTCGTI
Sbjct: 757  IFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQTKDVIVYRLMTCGTI 816

Query: 3148 EEKIYRMQVFKGGLFKTATENKEQTRYFSQQDLSELFRLPKEGFDVSVTQQQMNEEHDQQ 3327
            EEKIYR Q+FKGGLF+TATE+KEQTRYFSQQDL ELF LPK GFDVSVTQQQ++EEHD Q
Sbjct: 817  EEKIYRKQIFKGGLFRTATEHKEQTRYFSQQDLQELFSLPKHGFDVSVTQQQLHEEHDHQ 876

Query: 3328 HSMDDYLKNHIEFLKCQGIAGVSNHSLLFSKTAPLPAIEGNDELLR--RKQTTYVGCXXX 3501
            H+MD+ LK HI+FL+ QGIAGVS+H+LLFSKTA +  ++  +E+ R  R  TT V     
Sbjct: 877  HNMDESLKEHIKFLETQGIAGVSHHNLLFSKTARVLVVDEEEEVARASRTGTTSVMNKSA 936

Query: 3502 XXXLERHVDGAEFALNPKDTKTWKKNTASASPNKLTESEIREKMERLRHTYANKAMISKL 3681
                E+ V+ A++A  PK+    K N+++ S  KLTESEI+ ++ RL    ANKA +SKL
Sbjct: 937  GSSHEQDVEWAQYAFKPKEVNLHKTNSSADSAGKLTESEIKGRINRLSQILANKATVSKL 996

Query: 3682 PDRGEKLVRQIAELNMELQSISTDS--EAEVIDLDDISGKLQKV 3807
            PD+GE++ +QIAELN+EL  +      E EVIDLDD++GKL+ V
Sbjct: 997  PDKGERIQKQIAELNLELDKMRMTKRIETEVIDLDDVTGKLENV 1040


>ref|XP_002516323.1| ATP binding protein, putative [Ricinus communis]
            gi|223544553|gb|EEF46070.1| ATP binding protein, putative
            [Ricinus communis]
          Length = 1109

 Score = 1040 bits (2690), Expect = 0.0
 Identities = 552/886 (62%), Positives = 670/886 (75%), Gaps = 11/886 (1%)
 Frame = +1

Query: 1180 NIDEARKNNYG------FKKIESKPVFKEEGDSLMNCTNLGKNVDEPHKRSFGIKKTERT 1341
            N+ E  KN+ G      ++ ++ K V    G+S ++  N+ +  DE + RS    ++  T
Sbjct: 234  NVHENNKNSRGLNMENKYRGVDDKLV--AVGNSFVS--NIEEEEDETNLRSESECESRVT 289

Query: 1342 PFFKDKGYNT-VDRINDNGTQKKGYSMKKIEIKPYDILKESSLVVDYDDEDPNDILSSGE 1518
               +++  N    R+ DN +++     +        IL+      + DDE+   +LS  +
Sbjct: 290  ---RERETNKGTHRLKDNDSKRVHERSRVAGRSSVSILRNE----EDDDEEDCLVLSRKK 342

Query: 1519 SGKRVQSRAPRAKNEVKGSISVDALEDAGGDWVFEDGESIILTGKPSNYMLLGKIAKMLY 1698
              +       + K     S  +D L+D   D V +DG SI L+G  S + L  KIA MLY
Sbjct: 343  VVEEAGKLGGKNKEPCNLSSPIDLLDDDTDDSVLDDGGSITLSGPRSTFELPSKIATMLY 402

Query: 1699 PHQRSGLRWLWSLHCKGTGGILGDDMGLGKTMQICSFLAGLFHSGLIKRAMIVAPKTLLS 1878
            PHQR GL+WLWSLHC G GGILGDDMGLGKTMQIC FLAGLFHS LIKRA++VAPKTLL+
Sbjct: 403  PHQRDGLKWLWSLHCLGKGGILGDDMGLGKTMQICGFLAGLFHSRLIKRALVVAPKTLLA 462

Query: 1879 HWIKELTVVGLSEKIREYYGSCVKARQYELQYIFQDKGILLTTYDIVRNNFKSLRGDSYF 2058
            HWIKEL  VGLS K REY+G+ +KARQYELQYI QDKGILLTTYDIVRNN KSLRGD YF
Sbjct: 463  HWIKELAAVGLSRKTREYFGTSLKARQYELQYILQDKGILLTTYDIVRNNSKSLRGDDYF 522

Query: 2059 -DDDCED-IIWDYTILDEGHIIKNPSTQRAKSLLEIPSGHRIIISGTPIQNNLKELWALF 2232
             D++ ED   WDY ILDEGH+IKNPSTQRAKSLLEIPS HRIIISGTPIQNNLKELW LF
Sbjct: 523  ADEESEDGYTWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIIISGTPIQNNLKELWTLF 582

Query: 2233 SFCCPELLGDKKEFKVRYESAILRGNEKNATDREKRTGSAIAKELRERIEPYFLRRLKSE 2412
            +F CP LLGD   FK +YE  ILRGNEKNA+ REK  GS IAKELRERI+PYFLRRLK+E
Sbjct: 583  NFSCPNLLGDYNGFKKKYEHPILRGNEKNASAREKHVGSTIAKELRERIQPYFLRRLKNE 642

Query: 2413 VFLENESSKTSKLSKKNEIIVWLRMTQCQRQLYEAFLNSELVLSSFDGSPLAAITILKKI 2592
            VF E++ + T+ LSKKNE+IVWLR+T CQR+LY AFL SELVLS+FDGSPLAA+TILKKI
Sbjct: 643  VFKEDDLT-TATLSKKNEMIVWLRLTSCQRELYRAFLQSELVLSAFDGSPLAALTILKKI 701

Query: 2593 CDHPYLLTKRAAEEVLEGMETMLDGNDLSLIEKMALQLANASDGEDLQNLVDNVSCKITF 2772
            CDHP LLTKRAAE+VLEGM+  +   D  L EK+AL +A+ ++  + Q   DN+SCKI+F
Sbjct: 702  CDHPLLLTKRAAEDVLEGMD-FISPEDAGLAEKLALHVADVAEKAEFQEKHDNISCKISF 760

Query: 2773 ILSLLDNLIQEGHIVLIFSQTRKMLNFVQDAIISKGYKFLRIDGTTKISDREKIVNDFQE 2952
            I+SLLDNLI EGH VLIFSQ+RKMLN +QD++ S GY+FLRIDGTTK SDR KIVNDFQE
Sbjct: 761  IMSLLDNLIPEGHNVLIFSQSRKMLNLIQDSLASNGYEFLRIDGTTKASDRVKIVNDFQE 820

Query: 2953 GEGAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVVYRLM 3132
            G GAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQ+KDV+VYRLM
Sbjct: 821  GVGAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQRKDVLVYRLM 880

Query: 3133 TCGTIEEKIYRMQVFKGGLFKTATENKEQTRYFSQQDLSELFRLPKEGFDVSVTQQQMNE 3312
            TCGT+EEKIYR Q+FKGGLFKTATE+KEQ RYFSQQDL ELF LPK+GFD+S+TQQQ++E
Sbjct: 881  TCGTVEEKIYRKQIFKGGLFKTATEHKEQIRYFSQQDLRELFSLPKQGFDISLTQQQLHE 940

Query: 3313 EHDQQHSMDDYLKNHIEFLKCQGIAGVSNHSLLFSKTAPLPAIEGNDELLRRKQTTYVGC 3492
            EHD QH MD+ L+ H+ FL+  GIAGVS+HSLLFSKTAP+  +   +E +R K T +VG 
Sbjct: 941  EHDHQHKMDESLETHVNFLERLGIAGVSHHSLLFSKTAPVQVVNIEEEEMRDKVTAFVG- 999

Query: 3493 XXXXXXLERHVDGAEFALNPKDTKTWKKNTASASPNKLTESEIREKMERLRHTYANKAMI 3672
                  +ER+VDGA +ALNPKD K  KK+ +  +  KLTESEI+E++ RL     N A +
Sbjct: 1000 NSSRTTVERNVDGAVYALNPKDVKLNKKSCSPENVGKLTESEIKERISRLSQLLGNMATV 1059

Query: 3673 SKLPDRGEKLVRQIAELNMELQSISTD--SEAEVIDLDDISGKLQK 3804
            S+LPDRG KL +QI++LN+EL  I+ +  ++ EVIDLDD++G+LQ+
Sbjct: 1060 SRLPDRGAKLQKQISDLNLELDKINMEKSTKEEVIDLDDLTGELQR 1105



 Score = 72.4 bits (176), Expect = 9e-10
 Identities = 82/287 (28%), Positives = 112/287 (39%), Gaps = 25/287 (8%)
 Frame = +1

Query: 127 GRRRLCKVSSRDIEEKDDGAGFDGPNFSGIMDFDSP-PMKRMDFDDSPPKNNLDYESPKT 303
           GRRRLCK+SSRD E        D P+F+ I DFDSP P K M    S             
Sbjct: 82  GRRRLCKLSSRDKENAGSVTAVDEPSFADITDFDSPLPSKAMAGGKS------------- 128

Query: 304 KTLNLDTPETKNVNLDSRESTIRDILDDLSSKLNYLSIEKKKG-DKFEAGYETTLSSTKE 480
                        N D+ E  I DILDDLSS+L+ LSIEKK+G DK   G         E
Sbjct: 129 -------------NKDANE--IMDILDDLSSRLDLLSIEKKRGVDKAPDG-------PSE 166

Query: 481 ESPVRKGDRKGDVLLPDYDYXXXXXXXXXXXXXXXXXXXXXAVKSGVENDVVYNECYSSV 660
             P R G++K D  LP+Y                          +G     +Y+   SS 
Sbjct: 167 LLPGRDGEKKTD--LPEY------------------------ASAGSSFSDIYDSSDSSS 200

Query: 661 DCNNDVEKIERPSVFNEDDEEGESSVYC---TNNVSEVQKKYSGMEKIERKPAFNEE--- 822
             +N ++      V   D+ +  S   C    +NV E  K   G+    +    +++   
Sbjct: 201 VLSNSIDGGPESFVDKYDESQFLSKSRCDHFADNVHENNKNSRGLNMENKYRGVDDKLVA 260

Query: 823 -GDSFV----------------DCDSDVENANETPEKNHTFEKTERK 912
            G+SFV                +C+S V    ET +  H  +  + K
Sbjct: 261 VGNSFVSNIEEEEDETNLRSESECESRVTRERETNKGTHRLKDNDSK 307


>ref|XP_002309928.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222852831|gb|EEE90378.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 1108

 Score = 1038 bits (2683), Expect = 0.0
 Identities = 537/831 (64%), Positives = 646/831 (77%), Gaps = 14/831 (1%)
 Frame = +1

Query: 1354 DKGYNTVDRINDNGTQKKGYSMKKIEIKPYDILKESSLVVDYDDEDPNDILSSGESGKRV 1533
            +K  N   R+ +N        ++ +       L++ S     DDED   +L+  +  K+V
Sbjct: 282  EKTKNVTQRVKENEPDGFNERLRSVGRSSVLSLRDES----EDDEDDCVVLTGKKVVKKV 337

Query: 1534 QSRAPRAK-NEVKGSISVDALEDAGGDWVFEDGESIILTGKPSNYMLLGKIAKMLYPHQR 1710
                  AK N + G      LE+       ED  SIIL G  S Y L GKIAKMLYPHQ 
Sbjct: 338  GRPGAIAKYNVLSGESETAVLENHAES---EDDGSIILPGLKSTYKLPGKIAKMLYPHQC 394

Query: 1711 SGLRWLWSLHCKGTGGILGDDMGLGKTMQICSFLAGLFHSGLIKRAMIVAPKTLLSHWIK 1890
             GLRWLWSLHCKG GGILGDDMGLGKTMQICSFLAGLFHS LIKR ++VAPKTLL+HWIK
Sbjct: 395  EGLRWLWSLHCKGKGGILGDDMGLGKTMQICSFLAGLFHSKLIKRVLVVAPKTLLTHWIK 454

Query: 1891 ELTVVGLSEKIREYYGSCVKARQYELQYIFQDKGILLTTYDIVRNNFKSLRGDSYF-DDD 2067
            EL+VVGLS K REY+G+ +KAR YELQYI QDKGILLTTYDIVRNN KSLRGD YF D++
Sbjct: 455  ELSVVGLSGKTREYFGTSLKARDYELQYILQDKGILLTTYDIVRNNSKSLRGDHYFLDEE 514

Query: 2068 CED-IIWDYTILDEGHIIKNPSTQRAKSLLEIPSGHRIIISGTPIQNNLKELWALFSFCC 2244
             ED  IWDY ILDEGH+IKNPSTQRAKSL+EIPS H I+ISGTPIQNNLKELWALF+FCC
Sbjct: 515  SEDSYIWDYMILDEGHLIKNPSTQRAKSLIEIPSAHCIVISGTPIQNNLKELWALFNFCC 574

Query: 2245 PELLGDKKEFKVRYESAILRGNEKNATDREKRTGSAIAKELRERIEPYFLRRLKSEVFLE 2424
            P+LLGD K FK  YE  ILRGNEKNA+DREKR GS +A ELRERI+PYFLRR+K+EVF E
Sbjct: 575  PDLLGDNKWFKQTYEHPILRGNEKNASDREKRIGSTVAMELRERIQPYFLRRMKNEVFKE 634

Query: 2425 NESSKTSKLSKKNEIIVWLRMTQCQ--------RQLYEAFLNSELVLSSFDGSPLAAITI 2580
            ++++ T+KLS+KNEIIVWLR+T CQ        RQLYEAFL SE+VLS+FDGSPLAA+TI
Sbjct: 635  DDAT-TAKLSRKNEIIVWLRLTTCQQLRPLLCQRQLYEAFLRSEIVLSAFDGSPLAALTI 693

Query: 2581 LKKICDHPYLLTKRAAEEVLEGMETMLDGNDLSLIEKMALQLANASDGEDLQNLVDNVSC 2760
            LKKICDHP LLTKRAAE++LEGME+ML+  D+++ EK+A+ +A+ ++  D Q   D++SC
Sbjct: 694  LKKICDHPLLLTKRAAEDLLEGMESMLNPEDVAVAEKLAMHVADVAERTDFQEKHDSISC 753

Query: 2761 KITFILSLLDNLIQEGHIVLIFSQTRKMLNFVQDAIISKGYKFLRIDGTTKISDREKIVN 2940
            KI+F+LSLLDNLI EGH VLIFSQTRKMLN ++++++S GY+FLRIDGTTK++DR KIV+
Sbjct: 754  KISFVLSLLDNLIPEGHNVLIFSQTRKMLNLIEESLVSNGYEFLRIDGTTKVTDRAKIVD 813

Query: 2941 DFQEGEGAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVV 3120
            DFQEG GAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVV
Sbjct: 814  DFQEGNGAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVVV 873

Query: 3121 YRLMTCGTIEEKIYRMQVFKGGLFKTATENKEQTRYFSQQDLSELFRLPKEGFDVSVTQQ 3300
            YRLMTCGT+EEKIYR Q+FKGGLF+TATENKEQ RYFSQQDL ELF LPK+GF++S+TQQ
Sbjct: 874  YRLMTCGTVEEKIYRKQIFKGGLFRTATENKEQIRYFSQQDLRELFSLPKQGFNISLTQQ 933

Query: 3301 QMNEEHDQQHSMDDYLKNHIEFLKCQGIAGVSNHSLLFSKTAPLPAIEGNDELLRRKQTT 3480
            Q++EEHD QH MD+YL++HI+FL+ QGIAGVS+HSLLFSKT  +   +  ++ +R+K +T
Sbjct: 934  QLHEEHDSQHKMDEYLESHIKFLESQGIAGVSHHSLLFSKTETVQLAQEEEDEIRKKVST 993

Query: 3481 YVGCXXXXXXLERHVDGAEFALNPKDTKTWKKNTASASPNKLTESEIREKMERLRHTYAN 3660
             VG       LER+VDGA  A NPKD    KK ++  S  KLTESEI E++ RL     N
Sbjct: 994  MVGNSSSSYSLERNVDGAARAFNPKDVNLNKKTSSPDSVGKLTESEILERINRLSQLLGN 1053

Query: 3661 KAMISKLPDRGEKLVRQIAELNMELQSISTDSEAE---VIDLDDISGKLQK 3804
            K  + +LPD+G KL +QI+ELN  L  +  +   E   VI LDD++G+ ++
Sbjct: 1054 KVTVLRLPDQGAKLQKQISELNSVLIELRMEKATEREGVISLDDLTGEFER 1104



 Score = 64.3 bits (155), Expect = 3e-07
 Identities = 49/116 (42%), Positives = 60/116 (51%), Gaps = 4/116 (3%)
 Frame = +1

Query: 94  EKEKPQKVKIEGRRRLCKVSSRDIEEKDDGAGF---DGPNFSGIMDFDSP-PMKRMDFDD 261
           E+EKP KV+IEGRRRLCKVSS D  + DD +     D  +F  I DFDSP P K +    
Sbjct: 84  EEEKPTKVRIEGRRRLCKVSSGD--DGDDASREEVKDDSSFDDIADFDSPIPSKSVG--- 138

Query: 262 SPPKNNLDYESPKTKTLNLDTPETKNVNLDSRESTIRDILDDLSSKLNYLSIEKKK 429
                              D    K VN       I+DIL DL+S+L+ LSIEKK+
Sbjct: 139 -------------------DCGNNKGVN------EIKDILSDLTSRLDLLSIEKKR 169


>ref|XP_002306264.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222855713|gb|EEE93260.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 1058

 Score = 1023 bits (2645), Expect = 0.0
 Identities = 557/916 (60%), Positives = 668/916 (72%), Gaps = 25/916 (2%)
 Frame = +1

Query: 1132 FDVDGGGFHNSMSIVKNIDEARKNNYGFKKIESKPVFKEEGDSLMN--CTNLGKN----V 1293
            F    G   +S ++ KN  EA ++ +   +      F +E DS  N  C  L KN    V
Sbjct: 169  FSSSSGPSDSSSNVNKNFVEAYEDGHLLSES-----FADEVDSKGNDICKGLKKNEYGRV 223

Query: 1294 DE---PHKRSFGIKKTERTPFF-----KDKGYNTVDRINDNGTQKKGYSMKKIEIKPYDI 1449
            DE   P  +S      E          +D     V++ N    + K     +   K   +
Sbjct: 224  DEKLVPVGKSIASNVVEEEGDVQIVSDRDDYVTRVEKTNKVALKVKKNEPTRFHEKLRSV 283

Query: 1450 LKESSLVVDYDDEDPND---ILSSGESGKRVQSRAPRAK-NEVKGSISVDALEDAGGDWV 1617
             + S L +  + ED  D   +L+S +  K+V      AK N +    SV  + D   D  
Sbjct: 284  GRSSLLSLRDEPEDKGDDCEVLTSKKVVKKVGRPDAIAKYNLLSDESSVTDVLDNHAD-- 341

Query: 1618 FEDGESIILTGKPSNYMLLGKIAKMLYPHQRSGLRWLWSLHCKGTGGILGDDMGLGKTMQ 1797
             ED   I L G  S Y L G IAKMLYPHQR GLRWLWSLHC+G GGILGDDMGLGKTMQ
Sbjct: 342  SEDDSCITLPGPKSTYKLSGTIAKMLYPHQREGLRWLWSLHCQGKGGILGDDMGLGKTMQ 401

Query: 1798 ICSFLAGLFHSGLIKRAMIVAPKTLLSHWIKELTVVGLSEKIREYYGSCVKARQYELQYI 1977
            ICSFLAGLFHS LIKRA++VAPKTLLSHWIKEL+VVGLS K REY+G+ +KAR YELQYI
Sbjct: 402  ICSFLAGLFHSKLIKRALVVAPKTLLSHWIKELSVVGLSAKTREYFGTSLKARDYELQYI 461

Query: 1978 FQDKGILLTTYDIVRNNFKSLRGDSYF-DDDCED-IIWDYTILDEGHIIKNPSTQRAKSL 2151
             QDKGILLTTYDIVRNN KSLRGD YF DD+ ED  IWDY ILDEGH+IKNPSTQRAKSL
Sbjct: 462  LQDKGILLTTYDIVRNNSKSLRGDHYFIDDESEDSYIWDYMILDEGHLIKNPSTQRAKSL 521

Query: 2152 LEIPSGHRIIISGTPIQNNLKELWALFSFCCPELLGDKKEFKVRYESAILRGNEKNATDR 2331
            LEIPS H I+ISGTPIQNNLKELWALF+FCCP LLGD K FK  YE  ILRGNEKNA+DR
Sbjct: 522  LEIPSAHCIVISGTPIQNNLKELWALFNFCCPGLLGDNKWFKETYEHPILRGNEKNASDR 581

Query: 2332 EKRTGSAIAKELRERIEPYFLRRLKSEVFLENESSKTSKLSKKNEIIVWLRMTQCQRQLY 2511
            EKR GS +AKELRERI+PYFLRR+K+EVF E++++ T+KLS+KNEIIVWLR+T CQRQLY
Sbjct: 582  EKRIGSTVAKELRERIQPYFLRRMKNEVFKEDDAT-TAKLSRKNEIIVWLRLTACQRQLY 640

Query: 2512 EAFLNSELVLSSFDGSPLAAITILKKICDHPYLLTKRAAEEVLEGMETMLDGNDLSLIEK 2691
            EAFL SE+VLS+FDGSPLAA+TILKKICDHP LLTKRAAE++LEGME+ML+  D ++ EK
Sbjct: 641  EAFLRSEIVLSAFDGSPLAALTILKKICDHPLLLTKRAAEDLLEGMESMLNPEDAAVAEK 700

Query: 2692 MALQLANASD--GEDLQNLVDNVSCKITFILSLLDNLIQEGHIVLIFSQTRKMLNFVQDA 2865
            +A+ LA+ +D    D Q   DN+SCKI+FILSLLDNLI EGH VLIFSQTRKMLN +Q++
Sbjct: 701  LAMHLADVADRTDTDFQEKHDNISCKISFILSLLDNLIPEGHNVLIFSQTRKMLNLIQES 760

Query: 2866 IISKGYKFLRIDGTTKISDREKIVNDFQEGEGAPIFLLTSQVGGLGLTLTKADRVIVVDP 3045
            ++S GY+F+RIDGTTK +DR KIV+DFQEG GAPIFLLTSQVGGLGLTLTKADRVIVVDP
Sbjct: 761  LVSNGYEFIRIDGTTKATDRTKIVSDFQEGNGAPIFLLTSQVGGLGLTLTKADRVIVVDP 820

Query: 3046 AWNPSTDNQSVDRAYRIGQKKDVVVYRLMTCGTIEEKIYRMQVFKGGLFKTATENKEQTR 3225
            AWNPSTDNQSVDRAYRIGQ KDVVVYRLMTCG++EEKIYR Q+FKGGLF+TATENKEQ R
Sbjct: 821  AWNPSTDNQSVDRAYRIGQMKDVVVYRLMTCGSVEEKIYRKQIFKGGLFRTATENKEQIR 880

Query: 3226 YFSQQDLSELFRLPKEGFDVSVTQQQMNEEHDQQHSMDDYLKNHIEFLKCQGIAGVSNHS 3405
            YFSQQDL ELF LPK+GF++S+TQQQ++EEHD QH MD++L++HI+FL+ QGIAGVS+HS
Sbjct: 881  YFSQQDLRELFSLPKQGFNISLTQQQLHEEHDSQHKMDEFLESHIKFLETQGIAGVSHHS 940

Query: 3406 LLFSKTAPLPAIEGNDELLRRKQTTYVGCXXXXXXLERHVDGAEFALNPKDTKTWKKNTA 3585
            LLFSKTA +   +  ++ +R                      A  A NPKD    KK+++
Sbjct: 941  LLFSKTATVQVAQEEEDEIR----------------------AVHAFNPKDVNLKKKSSS 978

Query: 3586 SASPNKLTESEIREKMERLRHTYANKAMISKLPDRGEKLVRQIAELNMELQSISTDSEAE 3765
              S  KLTESEI+E++ RL     NK  IS+LPD+G KL +QI ELN EL  +  ++  E
Sbjct: 979  PDSVGKLTESEIKERINRLSQILGNKVTISRLPDQGAKLQKQIGELNSELNKLRMETATE 1038

Query: 3766 ---VIDLDDISGKLQK 3804
               +I LDD++G+ ++
Sbjct: 1039 REGIISLDDLTGEFER 1054



 Score = 64.7 bits (156), Expect = 2e-07
 Identities = 48/125 (38%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
 Frame = +1

Query: 79  SIPPSEKEKPQK----VKIEGRRRLCKVSSRDIEEKDDGAGFDGPNFSGIMDFDSPPMKR 246
           S  PSE+++ ++    VK+EGRRR CK      E +DD      PNF GI DFDS P   
Sbjct: 35  SATPSEEDEEEESVFNVKLEGRRRFCKA-----EAEDDSI----PNFCGITDFDSSP--- 82

Query: 247 MDFDDSPPKNNLDYESPKTKTLNLDTP-ETKNV-NLDSREST--IRDILDDLSSKLNYLS 414
            D  D   +  +  +S      + D+P  +KNV + D+      I+DIL+DL+S+L+ LS
Sbjct: 83  -DNGDGESREEVKTDSSFDGIADFDSPIPSKNVGDCDNNRGVNEIKDILNDLTSRLDLLS 141

Query: 415 IEKKK 429
           IEK++
Sbjct: 142 IEKRR 146


>ref|XP_003532357.1| PREDICTED: DNA excision repair protein ERCC-6-like [Glycine max]
          Length = 1030

 Score = 1011 bits (2615), Expect = 0.0
 Identities = 521/781 (66%), Positives = 621/781 (79%), Gaps = 6/781 (0%)
 Frame = +1

Query: 1483 DEDPNDILSSGES-GKRVQSRAPRAKNEVKGSISVDALEDAGGDWVFE---DGESIILTG 1650
            D+D ++  S+G S   + +S +   KN     I  DA +       FE   DG SI  TG
Sbjct: 253  DDDGSEFGSAGSSFSPQQESLSEGTKNGDGDDIEYDANDSVQELDHFEPETDG-SITFTG 311

Query: 1651 KPSNYMLLGKIAKMLYPHQRSGLRWLWSLHCKGTGGILGDDMGLGKTMQICSFLAGLFHS 1830
              S Y L  KIAKMLYPHQR GL+WLWSLHC G GGILGDDMGLGKTMQ+C FLAGLFHS
Sbjct: 312  PRSTYKLQAKIAKMLYPHQREGLKWLWSLHCLGKGGILGDDMGLGKTMQMCGFLAGLFHS 371

Query: 1831 GLIKRAMIVAPKTLLSHWIKELTVVGLSEKIREYYGSCVKARQYELQYIFQDKGILLTTY 2010
             LI+R +IVAPKTLL HWIKEL+ VGLSEK REY+G+  K R+YELQYI QD G+LLTTY
Sbjct: 372  RLIRRVLIVAPKTLLPHWIKELSAVGLSEKTREYFGTSTKLREYELQYILQDNGVLLTTY 431

Query: 2011 DIVRNNFKSLRGDSYFDDDC--EDIIWDYTILDEGHIIKNPSTQRAKSLLEIPSGHRIII 2184
            DIVRNN KSL+G++YFDD+   E   WDY ILDEGH+IKNPSTQRAKSLLEIPS HRIII
Sbjct: 432  DIVRNNSKSLQGNNYFDDEDNEEGATWDYMILDEGHLIKNPSTQRAKSLLEIPSAHRIII 491

Query: 2185 SGTPIQNNLKELWALFSFCCPELLGDKKEFKVRYESAILRGNEKNATDREKRTGSAIAKE 2364
            SGTP+QNNLKELWALF+FCCPELLGD K FK R+E+ ILRGN+K+A+DREKR GS++AKE
Sbjct: 492  SGTPLQNNLKELWALFNFCCPELLGDHKWFKERFENPILRGNDKHASDREKRVGSSVAKE 551

Query: 2365 LRERIEPYFLRRLKSEVFLENESSKTSKLSKKNEIIVWLRMTQCQRQLYEAFLNSELVLS 2544
            LR+RI PYFLRRLKSEVF +++   T+KLS+K EIIVWLR+T  QR LYEAFL SE+VLS
Sbjct: 552  LRDRIHPYFLRRLKSEVFNQDDEKTTAKLSQKQEIIVWLRLTSVQRHLYEAFLKSEIVLS 611

Query: 2545 SFDGSPLAAITILKKICDHPYLLTKRAAEEVLEGMETMLDGNDLSLIEKMALQLANASDG 2724
            +FDGSPLAA+TILKKICDHP LLTKRAAE+VLEGM++ML   + ++ EK+A+ +A+ +  
Sbjct: 612  AFDGSPLAALTILKKICDHPLLLTKRAAEDVLEGMDSMLKPEEANVAEKLAMHIADVAGT 671

Query: 2725 EDLQNLVDNVSCKITFILSLLDNLIQEGHIVLIFSQTRKMLNFVQDAIISKGYKFLRIDG 2904
            +  ++  D VSCKI+FI+SLLDNLI EGH VLIFSQTRKMLN +Q+ ++S+GY FLRIDG
Sbjct: 672  DKFKDEQD-VSCKISFIMSLLDNLIPEGHCVLIFSQTRKMLNLIQECLVSEGYDFLRIDG 730

Query: 2905 TTKISDREKIVNDFQEGEGAPIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDR 3084
            TTK +DR KIVNDFQEG GAPIFLLTSQVGGLGLTLT+ADRVIVVDPAWNPSTDNQSVDR
Sbjct: 731  TTKATDRLKIVNDFQEGFGAPIFLLTSQVGGLGLTLTRADRVIVVDPAWNPSTDNQSVDR 790

Query: 3085 AYRIGQKKDVVVYRLMTCGTIEEKIYRMQVFKGGLFKTATENKEQTRYFSQQDLSELFRL 3264
            AYRIGQKKDV+VYRLMTCGT+EEKIYR QV+KGGLFKTATE+KEQ RYFSQQDL ELF L
Sbjct: 791  AYRIGQKKDVLVYRLMTCGTVEEKIYRKQVYKGGLFKTATEHKEQIRYFSQQDLRELFSL 850

Query: 3265 PKEGFDVSVTQQQMNEEHDQQHSMDDYLKNHIEFLKCQGIAGVSNHSLLFSKTAPLPAIE 3444
            PKEGFDVSVTQ+Q+NEEHD+QH++DD  + H+EFLK   IAGVS+HSLLFSKTAP+    
Sbjct: 851  PKEGFDVSVTQRQLNEEHDRQHTVDDSFRAHLEFLKSHSIAGVSHHSLLFSKTAPVRTDP 910

Query: 3445 GNDELLRRKQTTYVGCXXXXXXLERHVDGAEFALNPKDTKTWKKNTASASPNKLTESEIR 3624
             +DE+ R     YVG        E    G EFA NPKD +  KK ++ +S  KLTESEI+
Sbjct: 911  EDDEVTRNHGAKYVGTSRSPSN-EHAAYGPEFAFNPKDVRLSKKGSSPSSAGKLTESEIK 969

Query: 3625 EKMERLRHTYANKAMISKLPDRGEKLVRQIAELNMELQSISTDSEAEVIDLDDISGKLQK 3804
            +K++ +  T +N  M SKLPD+GEKL +++AELN+EL  +  + E  V+DLDD + + Q+
Sbjct: 970  DKIKSISQTLSN--MASKLPDKGEKLQKRLAELNLELAELKRE-ERNVVDLDDFTTEFQR 1026

Query: 3805 V 3807
            V
Sbjct: 1027 V 1027