BLASTX nr result

ID: Coptis23_contig00011835 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00011835
         (266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFN42937.1| pleiotropic drug resistance transporter 5a [Nicot...    67   2e-09
gb|AFN42938.1| pleiotropic drug resistance transporter 5b [Nicot...    66   3e-09
gb|AFN42936.1| pleiotropic drug resistance transporter 5 [Nicoti...    66   3e-09
ref|XP_002515970.1| ATP-binding cassette transporter, putative [...    62   5e-08
ref|XP_002515971.1| ATP-binding cassette transporter, putative [...    61   8e-08

>gb|AFN42937.1| pleiotropic drug resistance transporter 5a [Nicotiana tabacum]
          Length = 1498

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 41/90 (45%), Positives = 55/90 (61%), Gaps = 2/90 (2%)
 Frame = -2

Query: 265  KPQAVLSEEVFNGMERNQEVREEA-MLEISRPNRQD-SRSLTSYEDNNTRDKEIQCLGSK 92
            KPQA LS+E  + ME  QE       L IS+  R D  RSL++ + N TR+ EI+ + S+
Sbjct: 802  KPQATLSKEQASDMEAEQEESTGTPRLRISQSKRDDLPRSLSAADGNKTREMEIRRMSSR 861

Query: 91   TYSRGLLGNTDSFHEAGSGVALNRGMVLPF 2
            T S GL  N D+  EA +GVA  +GM+LPF
Sbjct: 862  TSSSGLYRNEDANLEAANGVAAKKGMILPF 891


>gb|AFN42938.1| pleiotropic drug resistance transporter 5b [Nicotiana tabacum]
          Length = 1498

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 40/90 (44%), Positives = 57/90 (63%), Gaps = 2/90 (2%)
 Frame = -2

Query: 265  KPQAVLSEEVFNGMERNQEVREEA-MLEISRPNRQD-SRSLTSYEDNNTRDKEIQCLGSK 92
            KPQA LS+E  + ME +QE    +  L+IS+  R D  RSL++ + N TR+ EI+ + S 
Sbjct: 802  KPQATLSKEQASDMEADQEESTGSPRLKISQSKRDDLPRSLSAADGNKTREMEIRRMSSH 861

Query: 91   TYSRGLLGNTDSFHEAGSGVALNRGMVLPF 2
             +S GL  N D+  EA +GVA  +GM+LPF
Sbjct: 862  IHSSGLYRNEDANLEAANGVAAKKGMILPF 891


>gb|AFN42936.1| pleiotropic drug resistance transporter 5 [Nicotiana plumbaginifolia]
          Length = 1498

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 40/90 (44%), Positives = 56/90 (62%), Gaps = 2/90 (2%)
 Frame = -2

Query: 265  KPQAVLSEEVFNGMERNQEVREEA-MLEISRPNRQD-SRSLTSYEDNNTRDKEIQCLGSK 92
            KPQA LS+E  + ME +QE    +  L IS+  R D  RSL++ + N TR+ EI+ + S+
Sbjct: 802  KPQATLSKEQASDMEADQEESTGSPRLRISQSKRDDLPRSLSAADGNKTREMEIRRMSSR 861

Query: 91   TYSRGLLGNTDSFHEAGSGVALNRGMVLPF 2
            T S G   N D+  EA +GVA  +GM+LPF
Sbjct: 862  TSSSGFYRNEDANLEAANGVAAKKGMILPF 891


>ref|XP_002515970.1| ATP-binding cassette transporter, putative [Ricinus communis]
            gi|223544875|gb|EEF46390.1| ATP-binding cassette
            transporter, putative [Ricinus communis]
          Length = 1497

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 36/89 (40%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
 Frame = -2

Query: 265  KPQAVLSEEVFNGMERNQEVREEAMLEISRPNRQD-SRSLTSYEDNNTRDKEIQCLGSKT 89
            K QA++SEE    ME  ++ + E  L +S+  ++   +SLTS + NNTR+ EIQ + S  
Sbjct: 802  KKQAIISEETAVEMEGEEDSKGEPRLRVSKSQKESLPQSLTSADGNNTRELEIQRMSSPQ 861

Query: 88   YSRGLLGNTDSFHEAGSGVALNRGMVLPF 2
               GL  N DS  EA +G    +GM LPF
Sbjct: 862  NPSGLTINADSSIEAANGAPPKKGMALPF 890


>ref|XP_002515971.1| ATP-binding cassette transporter, putative [Ricinus communis]
            gi|223544876|gb|EEF46391.1| ATP-binding cassette
            transporter, putative [Ricinus communis]
          Length = 1462

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 35/89 (39%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
 Frame = -2

Query: 265  KPQAVLSEEVFNGMERNQEVREEAMLEISRPNRQD-SRSLTSYEDNNTRDKEIQCLGSKT 89
            K QAV+SEE    ME  ++ + +  L ++R  +    +SL+S + N+T++  +Q + S++
Sbjct: 801  KKQAVISEETAMEMEGEEDSKGQPRLRMTRSQKNSIPQSLSSADGNDTKEMAMQRMSSRS 860

Query: 88   YSRGLLGNTDSFHEAGSGVALNRGMVLPF 2
               GL  N DS  EA +GVA  RGMVLPF
Sbjct: 861  SPNGLSRNADSSLEAANGVAPKRGMVLPF 889


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