BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00011833
         (415 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268636.2| PREDICTED: pentatricopeptide repeat-containi...    80   1e-13
emb|CBI41008.3| unnamed protein product [Vitis vinifera]               80   1e-13
emb|CAN76851.1| hypothetical protein VITISV_005999 [Vitis vinifera]    80   1e-13
ref|XP_003635182.1| PREDICTED: pentatricopeptide repeat-containi...    79   3e-13
gb|AFK44188.1| unknown [Medicago truncatula]                           75   7e-12

>ref|XP_002268636.2| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
           mitochondrial [Vitis vinifera]
          Length = 383

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 41/90 (45%), Positives = 65/90 (72%), Gaps = 12/90 (13%)
 Frame = +2

Query: 167 KQKNLTTLVENFKNCSEI---RSRHLVYEKTLAKQ---------QQVLEHQKNKFDDITK 310
           +++NL  LV+ FK  SE+   R++  +YE+T+ +          +++LE QK K+ DI++
Sbjct: 35  RERNLKRLVQKFKKSSELDRFRTKTGIYEETVRRLASAKRFRWIEEILEEQK-KYKDISR 93

Query: 311 QGFAMRLISLYGKAGMFDHALKLFDELPER 400
           +GFA+RLISLYGK+GMFDHA K+FDE+P++
Sbjct: 94  EGFAVRLISLYGKSGMFDHAFKVFDEMPDQ 123


>emb|CBI41008.3| unnamed protein product [Vitis vinifera]
          Length = 379

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 41/90 (45%), Positives = 65/90 (72%), Gaps = 12/90 (13%)
 Frame = +2

Query: 167 KQKNLTTLVENFKNCSEI---RSRHLVYEKTLAKQ---------QQVLEHQKNKFDDITK 310
           +++NL  LV+ FK  SE+   R++  +YE+T+ +          +++LE QK K+ DI++
Sbjct: 43  RERNLKRLVQKFKKSSELDRFRTKTGIYEETVRRLASAKRFRWIEEILEEQK-KYKDISR 101

Query: 311 QGFAMRLISLYGKAGMFDHALKLFDELPER 400
           +GFA+RLISLYGK+GMFDHA K+FDE+P++
Sbjct: 102 EGFAVRLISLYGKSGMFDHAFKVFDEMPDQ 131


>emb|CAN76851.1| hypothetical protein VITISV_005999 [Vitis vinifera]
          Length = 383

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 41/90 (45%), Positives = 65/90 (72%), Gaps = 12/90 (13%)
 Frame = +2

Query: 167 KQKNLTTLVENFKNCSEI---RSRHLVYEKTLAKQ---------QQVLEHQKNKFDDITK 310
           +++NL  LV+ FK  SE+   R++  +YE+T+ +          +++LE QK K+ DI++
Sbjct: 35  RERNLKRLVQKFKKSSELDRFRTKTGIYEETVRRLASAKRFRWIEEILEEQK-KYKDISR 93

Query: 311 QGFAMRLISLYGKAGMFDHALKLFDELPER 400
           +GFA+RLISLYGK+GMFDHA K+FDE+P++
Sbjct: 94  EGFAVRLISLYGKSGMFDHAFKVFDEMPDQ 123


>ref|XP_003635182.1| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
           mitochondrial-like [Vitis vinifera]
          Length = 382

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 40/90 (44%), Positives = 65/90 (72%), Gaps = 12/90 (13%)
 Frame = +2

Query: 167 KQKNLTTLVENFKNCSEI---RSRHLVYEKTLAKQ---------QQVLEHQKNKFDDITK 310
           +++NL  LV+ FK  SE+   R++  +YE+T+ +          +++LE QK K+ DI++
Sbjct: 35  RERNLKRLVQKFKKSSELDRFRTKTGIYEETVRRLASAKRFRWIEEILEEQK-KYKDISR 93

Query: 311 QGFAMRLISLYGKAGMFDHALKLFDELPER 400
           +GFA+RLI+LYGK+GMFDHA K+FDE+P++
Sbjct: 94  EGFAVRLITLYGKSGMFDHAFKVFDEMPDQ 123


>gb|AFK44188.1| unknown [Medicago truncatula]
          Length = 376

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 41/92 (44%), Positives = 61/92 (66%), Gaps = 12/92 (13%)
 Frame = +2

Query: 161 LSKQKNLTTLVENFKNCSEI---RSRHLVYEKTLAKQ---------QQVLEHQKNKFDDI 304
           L K++NL TLVE FK  S+I   R ++ +YE T+ +          + ++EHQK+ + DI
Sbjct: 27  LYKEQNLKTLVEKFKKASDIDRFRKKNGIYEDTVRRLAGAKRFRWVRDIIEHQKS-YADI 85

Query: 305 TKQGFAMRLISLYGKAGMFDHALKLFDELPER 400
           + +GF+ RLI+LYGK+ M  HA KLFDE+P+R
Sbjct: 86  SNEGFSARLITLYGKSNMHRHAQKLFDEMPQR 117