BLASTX nr result

ID: Coptis23_contig00011824 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00011824
         (477 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271227.2| PREDICTED: protein STRUBBELIG-RECEPTOR FAMIL...   143   2e-45
emb|CBI38450.3| unnamed protein product [Vitis vinifera]              143   2e-45
ref|XP_002305672.1| predicted protein [Populus trichocarpa] gi|2...   125   4e-40
ref|XP_002319371.1| predicted protein [Populus trichocarpa] gi|2...   127   7e-40
ref|XP_002521411.1| lrr receptor-linked protein kinase, putative...   132   7e-40

>ref|XP_002271227.2| PREDICTED: protein STRUBBELIG-RECEPTOR FAMILY 1-like, partial
           [Vitis vinifera]
          Length = 717

 Score =  143 bits (361), Expect(2) = 2e-45
 Identities = 67/108 (62%), Positives = 89/108 (82%)
 Frame = -3

Query: 475 CLELWEVVQCVNSNVTGIILNGANLGGELGDNLDIFTSMIEINLSDNHIGGSIPSNLPLT 296
           CL+ W+ +QCVNSN+TG+ILNGANLGGEL  NLD+FTS+I+++LS+NHIGGSIPSNLP T
Sbjct: 133 CLDGWQGIQCVNSNITGLILNGANLGGELSGNLDLFTSLIQMDLSNNHIGGSIPSNLPPT 192

Query: 295 IRNFVLSANQFNGSIPDSVSSLTQLTDLELSGNNLSGQLPSALENLSS 152
           I    LS NQF+GSIP ++SS TQL+ + L+ N+L+G +P A + L+S
Sbjct: 193 IMQLFLSDNQFSGSIPVNLSSFTQLSAVSLNNNHLTGGIPDAFQQLTS 240



 Score = 63.9 bits (154), Expect(2) = 2e-45
 Identities = 32/55 (58%), Positives = 36/55 (65%)
 Frame = -2

Query: 167 GKFVILMTLHLQDNHLSGTXXXXXXXXXXXLNIENNLFSGPIPEKLLRIPNFKKD 3
           G  + L TLHLQ+N +SG            LNIENNLFSGPIP KLL IPNF+KD
Sbjct: 260 GNLLALTTLHLQNNQISGVLDVLQDLLLNELNIENNLFSGPIPAKLLSIPNFRKD 314


>emb|CBI38450.3| unnamed protein product [Vitis vinifera]
          Length = 655

 Score =  143 bits (361), Expect(2) = 2e-45
 Identities = 67/108 (62%), Positives = 89/108 (82%)
 Frame = -3

Query: 475 CLELWEVVQCVNSNVTGIILNGANLGGELGDNLDIFTSMIEINLSDNHIGGSIPSNLPLT 296
           CL+ W+ +QCVNSN+TG+ILNGANLGGEL  NLD+FTS+I+++LS+NHIGGSIPSNLP T
Sbjct: 60  CLDGWQGIQCVNSNITGLILNGANLGGELSGNLDLFTSLIQMDLSNNHIGGSIPSNLPPT 119

Query: 295 IRNFVLSANQFNGSIPDSVSSLTQLTDLELSGNNLSGQLPSALENLSS 152
           I    LS NQF+GSIP ++SS TQL+ + L+ N+L+G +P A + L+S
Sbjct: 120 IMQLFLSDNQFSGSIPVNLSSFTQLSAVSLNNNHLTGGIPDAFQQLTS 167



 Score = 63.9 bits (154), Expect(2) = 2e-45
 Identities = 32/55 (58%), Positives = 36/55 (65%)
 Frame = -2

Query: 167 GKFVILMTLHLQDNHLSGTXXXXXXXXXXXLNIENNLFSGPIPEKLLRIPNFKKD 3
           G  + L TLHLQ+N +SG            LNIENNLFSGPIP KLL IPNF+KD
Sbjct: 187 GNLLALTTLHLQNNQISGVLDVLQDLLLNELNIENNLFSGPIPAKLLSIPNFRKD 241


>ref|XP_002305672.1| predicted protein [Populus trichocarpa] gi|222848636|gb|EEE86183.1|
           predicted protein [Populus trichocarpa]
          Length = 667

 Score =  125 bits (313), Expect(2) = 4e-40
 Identities = 57/108 (52%), Positives = 78/108 (72%)
 Frame = -3

Query: 475 CLELWEVVQCVNSNVTGIILNGANLGGELGDNLDIFTSMIEINLSDNHIGGSIPSNLPLT 296
           CL+ W+ V CV SN+T + LNG NLGG L  +  +FTS++EI++SDNHIGG IP +LP T
Sbjct: 24  CLDGWQGVSCVLSNITSLKLNGLNLGGTLNSDFGLFTSIVEIDISDNHIGGDIPLSLPST 83

Query: 295 IRNFVLSANQFNGSIPDSVSSLTQLTDLELSGNNLSGQLPSALENLSS 152
           +RNF L+ NQF+G IPD++ SLTQL DL    N L+G++P     ++S
Sbjct: 84  MRNFSLARNQFSGRIPDTLYSLTQLLDLSFHNNQLTGEIPDVFPEMTS 131



 Score = 64.7 bits (156), Expect(2) = 4e-40
 Identities = 32/50 (64%), Positives = 36/50 (72%)
 Frame = -2

Query: 152 LMTLHLQDNHLSGTXXXXXXXXXXXLNIENNLFSGPIPEKLLRIPNFKKD 3
           L TLHLQ+N L+GT           LN+ENNLFSGPIPEKLL IPNF+KD
Sbjct: 156 LTTLHLQNNRLTGTLDVVQDLPLEYLNVENNLFSGPIPEKLLGIPNFRKD 205


>ref|XP_002319371.1| predicted protein [Populus trichocarpa] gi|222857747|gb|EEE95294.1|
           predicted protein [Populus trichocarpa]
          Length = 699

 Score =  127 bits (318), Expect(2) = 7e-40
 Identities = 62/106 (58%), Positives = 79/106 (74%)
 Frame = -3

Query: 475 CLELWEVVQCVNSNVTGIILNGANLGGELGDNLDIFTSMIEINLSDNHIGGSIPSNLPLT 296
           C E W+ + C  S +  I+LNGANLGGELGDNL +F S+I I LS+NHIGGSIPSNLP+T
Sbjct: 27  CGEGWQGIVCNVSEIQSIVLNGANLGGELGDNLGMFASIISIGLSNNHIGGSIPSNLPVT 86

Query: 295 IRNFVLSANQFNGSIPDSVSSLTQLTDLELSGNNLSGQLPSALENL 158
           ++N  LS N F GSIPDS+S+LT L  + L+ N LSG++P A + L
Sbjct: 87  MQNLFLSDNNFTGSIPDSLSTLTLLKAMSLNDNFLSGEIPDAFQAL 132



 Score = 62.0 bits (149), Expect(2) = 7e-40
 Identities = 31/50 (62%), Positives = 34/50 (68%)
 Frame = -2

Query: 152 LMTLHLQDNHLSGTXXXXXXXXXXXLNIENNLFSGPIPEKLLRIPNFKKD 3
           L TL LQDN LSGT           LN+ENNLFSGPIP+KLL IPNF+ D
Sbjct: 159 LTTLRLQDNQLSGTLDVLQDLPLRDLNVENNLFSGPIPDKLLAIPNFRND 208


>ref|XP_002521411.1| lrr receptor-linked protein kinase, putative [Ricinus communis]
           gi|223539310|gb|EEF40901.1| lrr receptor-linked protein
           kinase, putative [Ricinus communis]
          Length = 672

 Score =  132 bits (331), Expect(2) = 7e-40
 Identities = 72/132 (54%), Positives = 90/132 (68%), Gaps = 24/132 (18%)
 Frame = -3

Query: 475 CLELWEVVQCVNSNVTGIILNGANLGGELGDNLDIFTSMIEINLSDNHIGGSIPSNLPLT 296
           C E W+ V CV SN+T + L+G NLGG L D+L +F S+IEI+LS+NHIGGSIPS+LP T
Sbjct: 57  CGEEWQGVSCVFSNITALKLSGMNLGGTLADDLALFESIIEIDLSNNHIGGSIPSSLPPT 116

Query: 295 IRNFVLSANQFNGSIPDSVSSLTQL------------------------TDLELSGNNLS 188
           +R F L+ NQFNGSIPD++S+LTQL                        T+L+LSGNNLS
Sbjct: 117 LRIFSLAGNQFNGSIPDTLSTLTQLSHLSINDNHLSGEMPDAFQQLTSLTNLDLSGNNLS 176

Query: 187 GQLPSALENLSS 152
           GQLP +L NLSS
Sbjct: 177 GQLPPSLGNLSS 188



 Score = 57.0 bits (136), Expect(2) = 7e-40
 Identities = 29/55 (52%), Positives = 32/55 (58%)
 Frame = -2

Query: 167 GKFVILMTLHLQDNHLSGTXXXXXXXXXXXLNIENNLFSGPIPEKLLRIPNFKKD 3
           G    L +LHLQ N   G            LN+ENNLFSGPIP KLL IPNF+KD
Sbjct: 184 GNLSSLSSLHLQSNKFVGVLDVLQDLPLQDLNVENNLFSGPIPAKLLNIPNFRKD 238


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