BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00011807
         (1156 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79021.1| hypothetical protein VITISV_009443 [Vitis vinifera]   379   e-103
ref|XP_002281078.1| PREDICTED: ribonuclease H2 subunit B [Vitis ...   377   e-102
ref|XP_004138774.1| PREDICTED: ribonuclease H2 subunit B-like [C...   342   8e-92
ref|XP_002517803.1| conserved hypothetical protein [Ricinus comm...   341   2e-91
ref|XP_002333390.1| predicted protein [Populus trichocarpa] gi|2...   326   6e-87

>emb|CAN79021.1| hypothetical protein VITISV_009443 [Vitis vinifera]
          Length = 277

 Score =  379 bits (973), Expect = e-103
 Identities = 187/278 (67%), Positives = 220/278 (79%), Gaps = 2/278 (0%)
 Frame = -1

Query: 1090 MAWWEGVEETRLLIAPVPGPTNQNGEGSLLSLRHPKSGNPTSYFLNNGSLQELNWFKQSY 911
            MAW EGVEETRLLIAP       NG G  LSLRHPKSG  T Y   NG+LQELNWFKQSY
Sbjct: 1    MAWSEGVEETRLLIAPDVNAIG-NGLGQFLSLRHPKSGKATCYLFKNGTLQELNWFKQSY 59

Query: 910  GSWFLGEFVCEDGSLYTATPIDPVFILLPIFDEARMKKEGDKGKFRQLEEIMFINGYPGY 731
            GSWFLG++VCEDG LYTAT +DPVFI+LPIF+EARMKK  D GKFRQL+EIMF+N YPGY
Sbjct: 60   GSWFLGDYVCEDGRLYTATIVDPVFIMLPIFEEARMKKRDDPGKFRQLDEIMFVNSYPGY 119

Query: 730  QNLLSMAEESMLAVCEMKEVGSSKFFRLNDSKVLAWLCYKVHQLKLTLSALDKNYAAQDE 551
            Q+L+ +AE  M  VCE+KE+GSSKFFRL+DSKVLAWLCYKVHQLK  L  LDKNYAA+D+
Sbjct: 120  QHLIPIAENCMQVVCEIKEIGSSKFFRLDDSKVLAWLCYKVHQLKQILPTLDKNYAARDK 179

Query: 550  KDMLTEVVSLLGEYLNDEPWLKLLCSHLRLDLQEATKSTPFQEILPSAPESTPGSFIAQQ 371
            KD LT+ +S+LGEYL DEPWLKLLC HL+L+L +AT      E  P+AP+++ GS    Q
Sbjct: 180  KDTLTDAISILGEYLEDEPWLKLLCDHLKLNLLDATMKAXVIEFHPTAPDNSLGSSNQLQ 239

Query: 370  VKSASQKKTS--GRQAKKMKPETDSRNIKDMFTRASRR 263
             KS +++KT+  G+Q KK K E DSRNIKDMF+RASR+
Sbjct: 240  GKSGNERKTTRPGKQPKKAKVEKDSRNIKDMFSRASRK 277


>ref|XP_002281078.1| PREDICTED: ribonuclease H2 subunit B [Vitis vinifera]
            gi|296081827|emb|CBI20832.3| unnamed protein product
            [Vitis vinifera]
          Length = 277

 Score =  377 bits (969), Expect = e-102
 Identities = 186/278 (66%), Positives = 219/278 (78%), Gaps = 2/278 (0%)
 Frame = -1

Query: 1090 MAWWEGVEETRLLIAPVPGPTNQNGEGSLLSLRHPKSGNPTSYFLNNGSLQELNWFKQSY 911
            MAW EGVEETRLLIAP       NG G  LS RHPKSG  T Y   NG+LQELNWFKQSY
Sbjct: 1    MAWSEGVEETRLLIAPDVNAIG-NGLGQFLSFRHPKSGKATCYLFKNGTLQELNWFKQSY 59

Query: 910  GSWFLGEFVCEDGSLYTATPIDPVFILLPIFDEARMKKEGDKGKFRQLEEIMFINGYPGY 731
            GSWFLG++VCEDG LYTAT +DPVFI+LPIF+EARMKK  D GKFRQL+EIMF+N YPGY
Sbjct: 60   GSWFLGDYVCEDGRLYTATIVDPVFIMLPIFEEARMKKRDDPGKFRQLDEIMFVNSYPGY 119

Query: 730  QNLLSMAEESMLAVCEMKEVGSSKFFRLNDSKVLAWLCYKVHQLKLTLSALDKNYAAQDE 551
            Q+L+ +AE  M  VCE+KE+GSSKFFRL+DSKVLAWLCYKVHQLK  L  LDKNYAA+D+
Sbjct: 120  QHLIPIAENCMQVVCEIKEIGSSKFFRLDDSKVLAWLCYKVHQLKQILPTLDKNYAARDK 179

Query: 550  KDMLTEVVSLLGEYLNDEPWLKLLCSHLRLDLQEATKSTPFQEILPSAPESTPGSFIAQQ 371
            KD LT+ +S+LGEYL DEPWLKLLC HL+L+L +AT      E  P+AP+++ GS    Q
Sbjct: 180  KDTLTDAISILGEYLEDEPWLKLLCDHLKLNLLDATMKASVIEFHPTAPDNSLGSSNQLQ 239

Query: 370  VKSASQKKTS--GRQAKKMKPETDSRNIKDMFTRASRR 263
             KS +++KT+  G+Q KK K E DSRNIKDMF+RASR+
Sbjct: 240  GKSGNERKTTRPGKQPKKAKVEKDSRNIKDMFSRASRK 277


>ref|XP_004138774.1| PREDICTED: ribonuclease H2 subunit B-like [Cucumis sativus]
            gi|449499524|ref|XP_004160839.1| PREDICTED: ribonuclease
            H2 subunit B-like [Cucumis sativus]
          Length = 281

 Score =  342 bits (878), Expect = 8e-92
 Identities = 173/282 (61%), Positives = 214/282 (75%), Gaps = 4/282 (1%)
 Frame = -1

Query: 1090 MAWWEGVEETRLLIAPVPGPTNQNGEGSLLSLRHPKSGNPTSYFLNNGSLQELNWFKQSY 911
            MAW EGVEETR+LIAP  G   +N  G  LSLRHPKSGNPT +   N  L+E++WFKQSY
Sbjct: 1    MAWCEGVEETRILIAPDHG-VKENVTGCFLSLRHPKSGNPTCFLYVNEMLEEIHWFKQSY 59

Query: 910  GSWFLGEFVCEDGSLYTATPIDPVFILLPIFDEARMKKEGDKGKFRQLEEIMFINGYPGY 731
             SWFLG++V EDG LY+ATP+DPVFI LPIF+EARMKK  D GKFRQL++IMFINGYPGY
Sbjct: 60   SSWFLGDYVAEDGRLYSATPVDPVFIFLPIFEEARMKKGDDLGKFRQLDDIMFINGYPGY 119

Query: 730  QNLLSMAEESMLAVCEMKEVGSSKFFRLNDSKVLAWLCYKVHQLKLTLSALDKNYAAQDE 551
             +LL +AE+ M  VCE+KEVGSS+FFRL+DSKVLAWL +KV QLK TL  LDKNYAA++E
Sbjct: 120  LHLLPLAEKFMQVVCEVKEVGSSRFFRLDDSKVLAWLYHKVCQLKRTLCTLDKNYAAREE 179

Query: 550  KDMLTEVVSLLGEYLNDEPWLKLLCSHLRLDLQEATKSTPFQEILPSAPESTPGSFIAQQ 371
            K+ L + VS+LGEYL D+PWLKLLC HL+L+  EAT+     E  P++ E+   S    +
Sbjct: 180  KETLCDAVSILGEYLKDQPWLKLLCDHLKLNFAEATRKASDSERAPTSIENNFDSISQDK 239

Query: 370  VKSAS----QKKTSGRQAKKMKPETDSRNIKDMFTRASRRGR 257
              S S    +   +G+QAKK K ET+SRNIKDMF++A++R R
Sbjct: 240  SGSRSGSGAKNTRNGKQAKKPKVETESRNIKDMFSKAAKRKR 281


>ref|XP_002517803.1| conserved hypothetical protein [Ricinus communis]
            gi|223543075|gb|EEF44610.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 299

 Score =  341 bits (875), Expect = 2e-91
 Identities = 173/273 (63%), Positives = 210/273 (76%), Gaps = 2/273 (0%)
 Frame = -1

Query: 1075 GVEETRLLIAPVPGPTNQNGEGSLLSLRHPKSGNPTSYFLNNGSLQELNWFKQSYGSWFL 896
            G++ETRLLIA      N +G G LLSL+HPKSG  T Y LNN  LQEL+WFKQSY SWFL
Sbjct: 31   GMDETRLLIAH---SANADGVGRLLSLQHPKSGKTTCYLLNNRMLQELHWFKQSYTSWFL 87

Query: 895  GEFVCEDGSLYTATPIDPVFILLPIFDEARMKKEGDKGKFRQLEEIMFINGYPGYQNLLS 716
            G++VC+DG LY+ATP+DPVFILLPIF+EARM+K  D GKFRQL+EI+FINGYPGY+ L+ 
Sbjct: 88   GDYVCQDGCLYSATPVDPVFILLPIFEEARMRKGDDPGKFRQLDEILFINGYPGYRYLMP 147

Query: 715  MAEESMLAVCEMKEVGSSKFFRLNDSKVLAWLCYKVHQLKLTLSALDKNYAAQDEKDMLT 536
            +AE  M  VCE+KE+GSSKFFRLNDSKV AWL  KV QLK  +S+LDKNYAAQDEK+ L 
Sbjct: 148  IAENCMQVVCEIKEIGSSKFFRLNDSKVFAWLLCKVSQLKQAVSSLDKNYAAQDEKNTLA 207

Query: 535  EVVSLLGEYLNDEPWLKLLCSHLRLDLQEATKSTPFQEILPSAPESTPGSFIAQQVKSAS 356
            + + +LGEYL DEPWLKLLC+HL+L+L EAT+  P  E   S  E+ P S    Q K  +
Sbjct: 208  DAIMILGEYLKDEPWLKLLCNHLKLNLLEATRKVPDAE--TSLTENNPASSNLMQEKGKN 265

Query: 355  QKKT--SGRQAKKMKPETDSRNIKDMFTRASRR 263
              KT  +G+QAKK K ET+S NI++MF+RASRR
Sbjct: 266  DGKTKRTGKQAKKAKVETESLNIREMFSRASRR 298


>ref|XP_002333390.1| predicted protein [Populus trichocarpa] gi|222836425|gb|EEE74832.1|
            predicted protein [Populus trichocarpa]
          Length = 551

 Score =  326 bits (836), Expect = 6e-87
 Identities = 172/277 (62%), Positives = 204/277 (73%), Gaps = 10/277 (3%)
 Frame = -1

Query: 1063 TRLLIAPVPGPTNQNG----EGSLLSLRHPKSGNPTSYFLNNGS----LQELNWFKQSYG 908
            +RLLIAP P PT  +      G LL LRHPKSGN T+Y L++ +    LQEL+WFKQSY 
Sbjct: 274  SRLLIAPAPSPTAGDTAAGINGCLLLLRHPKSGNATNYLLSHDNEGAVLQELHWFKQSYT 333

Query: 907  SWFLGEFVCEDGSLYTATPIDPVFILLPIFDEARMKKEGDKGKFRQLEEIMFINGYPGYQ 728
            SWFLG++V +DGSLYTATP+DPVFILLPIF+EARMKK  D GKFRQL+EI+FIN YPGY 
Sbjct: 334  SWFLGDYVSQDGSLYTATPVDPVFILLPIFEEARMKKRDDLGKFRQLDEIIFINDYPGYH 393

Query: 727  NLLSMAEESMLAVCEMKEVGSSKFFRLNDSKVLAWLCYKVHQLKLTLSALDKNYAAQDEK 548
            +L+S+AE  M  VCE+KE+GSSKFFRL+DSKVLAWL  KV QLK  L +LDKNYAAQDEK
Sbjct: 394  HLMSIAENCMGVVCEIKEIGSSKFFRLDDSKVLAWLYCKVFQLKKALCSLDKNYAAQDEK 453

Query: 547  DMLTEVVSLLGEYLNDEPWLKLLCSHLRLDLQEATKSTPFQEILPSAPESTPGSFIAQQV 368
              L   VS+LGEY+ DEPWL LL  HL+L+L E T   P  E  P+  E  P S    Q 
Sbjct: 454  YTLAGAVSILGEYVKDEPWLMLLLDHLKLNLLEVTSKVPEAENFPTNAEHNPVSSSLLQE 513

Query: 367  KSASQKKT--SGRQAKKMKPETDSRNIKDMFTRASRR 263
            K  S+ KT  SG+QAKK K ET+SRNI++MF RA R+
Sbjct: 514  KDRSEDKTKRSGKQAKKAKVETESRNIREMFRRACRK 550