BLASTX nr result

ID: Coptis23_contig00011804 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00011804
         (672 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE69144.1| hypothetical protein OsJ_28268 [Oryza sativa Japo...   150   2e-34
gb|EAZ07996.1| hypothetical protein OsI_30258 [Oryza sativa Indi...   149   4e-34
gb|EEC75227.1| hypothetical protein OsI_11496 [Oryza sativa Indi...   132   3e-29
gb|ABF95850.1| retrotransposon protein, putative, unclassified [...   130   1e-28
gb|EEE59033.1| hypothetical protein OsJ_10782 [Oryza sativa Japo...   130   1e-28

>gb|EEE69144.1| hypothetical protein OsJ_28268 [Oryza sativa Japonica Group]
          Length = 1256

 Score =  150 bits (380), Expect = 2e-34
 Identities = 76/190 (40%), Positives = 115/190 (60%)
 Frame = +1

Query: 103 LTNTICEEIRNLKSQINDWLDKKEDLWRQISGSLWLKEQGRNTKFFHTSTIYRSRKNTID 282
           L+NT   EIR +  Q+N+ L ++E +W Q S   WLKE  RNT+FFH+  ++R++KN I 
Sbjct: 389 LSNTDSREIRRVSDQMNELLYREEMIWLQRSRIAWLKEGDRNTRFFHSKAVWRAKKNKIT 448

Query: 283 KLKDDYGTWVDGRDKVSKNFNSFFQELFISDRPVTNASISSLFTPCITDLENQMLTKIPS 462
           KL+D  GT  +   ++      +FQ LF +D  + ++ ++SL  P +TD  N+ L K  S
Sbjct: 449 KLRDSDGTVHNTTKELESMATEYFQRLFTADPSIDHSRVTSLIKPKVTDAMNEELCKTVS 508

Query: 463 GEDIWLVVKKMGALKASGPDGFQGVFFQTCWDVVGPAVVDCIQDFFSNGVLNPKFNETFI 642
            E+I   + ++G LKA GPDGF G F+Q  W ++   +V  +Q+FFS+G +    NET I
Sbjct: 509 EEEIANALFQIGPLKAPGPDGFPGRFYQRNWAILKDDIVRAVQEFFSSGTMPSGVNETAI 568

Query: 643 ALIPKISSPE 672
            LIPK   P+
Sbjct: 569 VLIPKTEQPQ 578


>gb|EAZ07996.1| hypothetical protein OsI_30258 [Oryza sativa Indica Group]
          Length = 633

 Score =  149 bits (377), Expect = 4e-34
 Identities = 76/190 (40%), Positives = 114/190 (60%)
 Frame = +1

Query: 103 LTNTICEEIRNLKSQINDWLDKKEDLWRQISGSLWLKEQGRNTKFFHTSTIYRSRKNTID 282
           L+NT   EIR +  Q+N+ L ++E +W Q S   WLKE  RNT+FFH+  ++R++KN I 
Sbjct: 389 LSNTDSMEIRRVSDQMNELLYREEMIWLQRSRIAWLKEGDRNTRFFHSKAVWRAKKNKIT 448

Query: 283 KLKDDYGTWVDGRDKVSKNFNSFFQELFISDRPVTNASISSLFTPCITDLENQMLTKIPS 462
           KL+D  GT      ++      +FQ LF +D  + ++ ++SL  P +TD  N+ L K  S
Sbjct: 449 KLRDSDGTVHSTTKELESMATEYFQRLFTADPSIDHSRVTSLIKPKVTDAMNEELCKTVS 508

Query: 463 GEDIWLVVKKMGALKASGPDGFQGVFFQTCWDVVGPAVVDCIQDFFSNGVLNPKFNETFI 642
            E+I   + ++G LKA GPDGF G F+Q  W ++   +V  +Q+FFS+G +    NET I
Sbjct: 509 EEEIANALFQIGPLKAPGPDGFPGRFYQRNWAILKDDIVRAVQEFFSSGTMPSGVNETAI 568

Query: 643 ALIPKISSPE 672
            LIPK   P+
Sbjct: 569 VLIPKTEQPQ 578


>gb|EEC75227.1| hypothetical protein OsI_11496 [Oryza sativa Indica Group]
          Length = 1059

 Score =  132 bits (332), Expect(2) = 3e-29
 Identities = 71/183 (38%), Positives = 105/183 (57%)
 Frame = +1

Query: 124 EIRNLKSQINDWLDKKEDLWRQISGSLWLKEQGRNTKFFHTSTIYRSRKNTIDKLKDDYG 303
           EIR L +++++ L ++E +W Q S   WLKE  RNTKFFH    +RS+KN I +LK +  
Sbjct: 75  EIRMLYARMDELLYREEMMWLQRSRVAWLKEGDRNTKFFHRQAAWRSKKNKITRLKAEDS 134

Query: 304 TWVDGRDKVSKNFNSFFQELFISDRPVTNASISSLFTPCITDLENQMLTKIPSGEDIWLV 483
            +V+ ++++      FFQ L++ D  V    +    TP + D  N  L K  S ++I   
Sbjct: 135 RFVENKEEMEHMAREFFQTLYLKDNSVDPRELIDALTPRVDDGMNAGLCKPFSDDEIAYA 194

Query: 484 VKKMGALKASGPDGFQGVFFQTCWDVVGPAVVDCIQDFFSNGVLNPKFNETFIALIPKIS 663
           + ++G LKA GPDGF   FFQ  W V+   V   +++FF  GV+    N+T I LIPK+S
Sbjct: 195 LFQIGPLKAPGPDGFPARFFQRNWAVLKKEVTTAVRNFFLQGVMLAGVNDTSIVLIPKVS 254

Query: 664 SPE 672
            PE
Sbjct: 255 KPE 257



 Score = 22.3 bits (46), Expect(2) = 3e-29
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +3

Query: 12  LNKWNKEVFGNVFSHIRRI*NKLE 83
           L +W+  VFG+V   ++ I  K+E
Sbjct: 39  LREWSINVFGSVTQELKEIKAKVE 62


>gb|ABF95850.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 940

 Score =  130 bits (327), Expect(2) = 1e-28
 Identities = 71/183 (38%), Positives = 105/183 (57%)
 Frame = +1

Query: 124 EIRNLKSQINDWLDKKEDLWRQISGSLWLKEQGRNTKFFHTSTIYRSRKNTIDKLKDDYG 303
           EIR L +++++ L ++E +W Q S   WLKE  RNTKFFH    +RS+KN I +LK +  
Sbjct: 40  EIRMLYARMDELLYREEIMWLQRSRVAWLKEGDRNTKFFHRQAAWRSKKNKITRLKAEDS 99

Query: 304 TWVDGRDKVSKNFNSFFQELFISDRPVTNASISSLFTPCITDLENQMLTKIPSGEDIWLV 483
            +V+ ++++      FFQ L++ D  V    +    TP + D  N  L K  S ++I   
Sbjct: 100 RFVENKEEMEHMAREFFQTLYLKDNSVDPRELIDALTPRVDDGMNAGLCKPFSYDEIADA 159

Query: 484 VKKMGALKASGPDGFQGVFFQTCWDVVGPAVVDCIQDFFSNGVLNPKFNETFIALIPKIS 663
           + ++G LKA GPDGF   FFQ  W V+   V   +++FF  GV+    N+T I LIPK+S
Sbjct: 160 LFQIGPLKAPGPDGFPARFFQRNWAVLKKEVTTAVRNFFLQGVMLAGVNDTSIVLIPKVS 219

Query: 664 SPE 672
            PE
Sbjct: 220 KPE 222



 Score = 22.3 bits (46), Expect(2) = 1e-28
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +3

Query: 12 LNKWNKEVFGNVFSHIRRI*NKLE 83
          L +W+  VFG+V   ++ I  K+E
Sbjct: 4  LREWSINVFGSVTQELKEIKAKVE 27


>gb|EEE59033.1| hypothetical protein OsJ_10782 [Oryza sativa Japonica Group]
          Length = 850

 Score =  130 bits (327), Expect(2) = 1e-28
 Identities = 71/183 (38%), Positives = 105/183 (57%)
 Frame = +1

Query: 124 EIRNLKSQINDWLDKKEDLWRQISGSLWLKEQGRNTKFFHTSTIYRSRKNTIDKLKDDYG 303
           EIR L +++++ L ++E +W Q S   WLKE  RNTKFFH    +RS+KN I +LK +  
Sbjct: 40  EIRMLYARMDELLYREEIMWLQRSRVAWLKEGDRNTKFFHRQAAWRSKKNKITRLKAEDS 99

Query: 304 TWVDGRDKVSKNFNSFFQELFISDRPVTNASISSLFTPCITDLENQMLTKIPSGEDIWLV 483
            +V+ ++++      FFQ L++ D  V    +    TP + D  N  L K  S ++I   
Sbjct: 100 RFVENKEEMEHMAREFFQTLYLKDNSVDPRELIDALTPRVDDGMNAGLCKPFSYDEIADA 159

Query: 484 VKKMGALKASGPDGFQGVFFQTCWDVVGPAVVDCIQDFFSNGVLNPKFNETFIALIPKIS 663
           + ++G LKA GPDGF   FFQ  W V+   V   +++FF  GV+    N+T I LIPK+S
Sbjct: 160 LFQIGPLKAPGPDGFPARFFQRNWAVLKKEVTTAVRNFFLQGVMLAGVNDTSIVLIPKVS 219

Query: 664 SPE 672
            PE
Sbjct: 220 KPE 222



 Score = 22.3 bits (46), Expect(2) = 1e-28
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +3

Query: 12 LNKWNKEVFGNVFSHIRRI*NKLE 83
          L +W+  VFG+V   ++ I  K+E
Sbjct: 4  LREWSINVFGSVTQELKEIKAKVE 27


Top