BLASTX nr result

ID: Coptis23_contig00011797 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00011797
         (714 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282050.1| PREDICTED: protein RER1B [Vitis vinifera] gi...   248   7e-64
ref|XP_004152693.1| PREDICTED: protein RER1B-like [Cucumis sativ...   248   1e-63
ref|XP_002510410.1| rer1 protein, putative [Ricinus communis] gi...   246   4e-63
ref|XP_002300762.1| predicted protein [Populus trichocarpa] gi|2...   242   5e-62
gb|ABK92712.1| unknown [Populus trichocarpa]                          242   5e-62

>ref|XP_002282050.1| PREDICTED: protein RER1B [Vitis vinifera]
           gi|302142515|emb|CBI19718.3| unnamed protein product
           [Vitis vinifera]
          Length = 194

 Score =  248 bits (634), Expect = 7e-64
 Identities = 115/144 (79%), Positives = 125/144 (86%)
 Frame = +1

Query: 4   RWIGTLVAAFIYVLRVYFVQGFYVVSYXXXXXXXXXXXXXXSPKVDPELEALDGANLPTK 183
           RW+GTL  A IYVLRVY+VQGFY+VSY              SPKVDPELE LDGA+LPTK
Sbjct: 40  RWLGTLAVAAIYVLRVYYVQGFYIVSYGLGIYILNLLIGFLSPKVDPELEVLDGASLPTK 99

Query: 184 GSDEFKPFIRRLPEFKFWYAITKAFCVAFLMTFFSMFDVPVFWPILLCYWIVLFVLTMKR 363
           GSDEFKPFIRRLPEFKFWY+ITKAFCVAFLMTFFS+FDVPVFWPILLCYWIVLFVLTMKR
Sbjct: 100 GSDEFKPFIRRLPEFKFWYSITKAFCVAFLMTFFSVFDVPVFWPILLCYWIVLFVLTMKR 159

Query: 364 QILHMMKYKYIPFSFGKQKYTGKK 435
           QI+HM+KYKY+PFS GKQ+YTGKK
Sbjct: 160 QIMHMIKYKYVPFSIGKQRYTGKK 183


>ref|XP_004152693.1| PREDICTED: protein RER1B-like [Cucumis sativus]
           gi|449496096|ref|XP_004160038.1| PREDICTED: protein
           RER1B-like [Cucumis sativus]
          Length = 194

 Score =  248 bits (632), Expect = 1e-63
 Identities = 114/145 (78%), Positives = 127/145 (87%)
 Frame = +1

Query: 1   ERWIGTLVAAFIYVLRVYFVQGFYVVSYXXXXXXXXXXXXXXSPKVDPELEALDGANLPT 180
           +RW+GTL+ A IYVLRV++VQGFYVVSY              SPKVDPEL+ LDGA+LPT
Sbjct: 39  QRWLGTLLVAAIYVLRVFYVQGFYVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPT 98

Query: 181 KGSDEFKPFIRRLPEFKFWYAITKAFCVAFLMTFFSMFDVPVFWPILLCYWIVLFVLTMK 360
           KGSDEFKPFIRRLPEFKFWYAITKAFC+AFLMTFFS+FDVPVFWPILLCYWIVLFVLTMK
Sbjct: 99  KGSDEFKPFIRRLPEFKFWYAITKAFCIAFLMTFFSLFDVPVFWPILLCYWIVLFVLTMK 158

Query: 361 RQILHMMKYKYIPFSFGKQKYTGKK 435
           RQI+HM+KYKYIPFS GKQ+YTGK+
Sbjct: 159 RQIMHMIKYKYIPFSIGKQRYTGKR 183


>ref|XP_002510410.1| rer1 protein, putative [Ricinus communis]
           gi|223551111|gb|EEF52597.1| rer1 protein, putative
           [Ricinus communis]
          Length = 194

 Score =  246 bits (627), Expect = 4e-63
 Identities = 112/145 (77%), Positives = 126/145 (86%)
 Frame = +1

Query: 1   ERWIGTLVAAFIYVLRVYFVQGFYVVSYXXXXXXXXXXXXXXSPKVDPELEALDGANLPT 180
           ERW+GTL A+ IY+LRVY+ QGFY+VSY              SPKVDPELE LDGA+LPT
Sbjct: 39  ERWLGTLAASAIYMLRVYYAQGFYIVSYGLGIYILNLLIGFLSPKVDPELEVLDGASLPT 98

Query: 181 KGSDEFKPFIRRLPEFKFWYAITKAFCVAFLMTFFSMFDVPVFWPILLCYWIVLFVLTMK 360
           KGSDEFKPFIRRLPEFKFWY+ITKAFCVAFLMTFFS+FDVPVFWPILLCYW+VLFVLTMK
Sbjct: 99  KGSDEFKPFIRRLPEFKFWYSITKAFCVAFLMTFFSVFDVPVFWPILLCYWVVLFVLTMK 158

Query: 361 RQILHMMKYKYIPFSFGKQKYTGKK 435
           RQI+HM+KYKY+PFS GKQ+Y+GKK
Sbjct: 159 RQIMHMIKYKYVPFSVGKQRYSGKK 183


>ref|XP_002300762.1| predicted protein [Populus trichocarpa] gi|222842488|gb|EEE80035.1|
           predicted protein [Populus trichocarpa]
          Length = 194

 Score =  242 bits (618), Expect = 5e-62
 Identities = 112/145 (77%), Positives = 123/145 (84%)
 Frame = +1

Query: 1   ERWIGTLVAAFIYVLRVYFVQGFYVVSYXXXXXXXXXXXXXXSPKVDPELEALDGANLPT 180
           +RW+GTL  A IYVLRV++ QGFY+VSY              SPKVDPELE LDGA+LPT
Sbjct: 39  QRWLGTLAVAAIYVLRVFYAQGFYIVSYGLGIYILNLLIGFLSPKVDPELEVLDGASLPT 98

Query: 181 KGSDEFKPFIRRLPEFKFWYAITKAFCVAFLMTFFSMFDVPVFWPILLCYWIVLFVLTMK 360
           KGSDEFKPFIRRLPEFKFWYAITKAFCVAFLMTFFS+FDVPVFWPILLCYWIVLFVLTMK
Sbjct: 99  KGSDEFKPFIRRLPEFKFWYAITKAFCVAFLMTFFSIFDVPVFWPILLCYWIVLFVLTMK 158

Query: 361 RQILHMMKYKYIPFSFGKQKYTGKK 435
           RQ++HMMKYKY+PFS GKQ+Y  KK
Sbjct: 159 RQLMHMMKYKYVPFSLGKQRYGKKK 183


>gb|ABK92712.1| unknown [Populus trichocarpa]
          Length = 157

 Score =  242 bits (618), Expect = 5e-62
 Identities = 112/145 (77%), Positives = 123/145 (84%)
 Frame = +1

Query: 1   ERWIGTLVAAFIYVLRVYFVQGFYVVSYXXXXXXXXXXXXXXSPKVDPELEALDGANLPT 180
           +RW+GTL  A IYVLRV++ QGFY+VSY              SPKVDPELE LDGA+LPT
Sbjct: 2   QRWLGTLAVAAIYVLRVFYAQGFYIVSYGLGIYILNLLIGFLSPKVDPELEVLDGASLPT 61

Query: 181 KGSDEFKPFIRRLPEFKFWYAITKAFCVAFLMTFFSMFDVPVFWPILLCYWIVLFVLTMK 360
           KGSDEFKPFIRRLPEFKFWYAITKAFCVAFLMTFFS+FDVPVFWPILLCYWIVLFVLTMK
Sbjct: 62  KGSDEFKPFIRRLPEFKFWYAITKAFCVAFLMTFFSIFDVPVFWPILLCYWIVLFVLTMK 121

Query: 361 RQILHMMKYKYIPFSFGKQKYTGKK 435
           RQ++HMMKYKY+PFS GKQ+Y  KK
Sbjct: 122 RQLMHMMKYKYVPFSLGKQRYGKKK 146


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