BLASTX nr result
ID: Coptis23_contig00011791
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00011791 (592 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002513776.1| conserved hypothetical protein [Ricinus comm... 100 3e-19 ref|XP_002301002.1| predicted protein [Populus trichocarpa] gi|1... 99 7e-19 ref|XP_002285840.1| PREDICTED: selenoprotein K [Vitis vinifera] ... 99 7e-19 ref|XP_002307425.1| predicted protein [Populus trichocarpa] gi|1... 98 9e-19 ref|XP_004140863.1| PREDICTED: selenoprotein K-like [Cucumis sat... 97 2e-18 >ref|XP_002513776.1| conserved hypothetical protein [Ricinus communis] gi|223546862|gb|EEF48359.1| conserved hypothetical protein [Ricinus communis] Length = 100 Score = 99.8 bits (247), Expect = 3e-19 Identities = 56/100 (56%), Positives = 63/100 (63%), Gaps = 5/100 (5%) Frame = -3 Query: 464 MAYVERGVVQSKRSIWRLRTITDXXXXXXXXXXXXFGTLFSVDKSDAYKK---SGKKWD- 297 MAYVERGVV+SK+SIWRLRTITD F T+FS++KSDAY+K S KKWD Sbjct: 1 MAYVERGVVKSKKSIWRLRTITDFFWAIINFIGVFFSTMFSMEKSDAYRKGSGSSKKWDG 60 Query: 296 -XXXXXXXXXXXXXXXXXXGMDNVRGIDHSSLPACGSCCG 180 G+DNVRGIDHSSLPACGSCCG Sbjct: 61 GPGGPGSGPYGGGPRGPPRGLDNVRGIDHSSLPACGSCCG 100 >ref|XP_002301002.1| predicted protein [Populus trichocarpa] gi|118481555|gb|ABK92720.1| unknown [Populus trichocarpa] gi|222842728|gb|EEE80275.1| predicted protein [Populus trichocarpa] Length = 100 Score = 98.6 bits (244), Expect = 7e-19 Identities = 55/100 (55%), Positives = 63/100 (63%), Gaps = 5/100 (5%) Frame = -3 Query: 464 MAYVERGVVQSKRSIWRLRTITDXXXXXXXXXXXXFGTLFSVDKSDAYKK---SGKKWD- 297 MAYVERGV++SKRSIWRLRTITD F T+FS++K+DAY+K S KKWD Sbjct: 1 MAYVERGVLKSKRSIWRLRTITDFFWAIVNLIGVFFSTMFSMEKTDAYRKGSGSSKKWDG 60 Query: 296 -XXXXXXXXXXXXXXXXXXGMDNVRGIDHSSLPACGSCCG 180 G+DNVRGIDHSSLPACGSCCG Sbjct: 61 GPGGPGSGPYGGGPRGPPRGLDNVRGIDHSSLPACGSCCG 100 >ref|XP_002285840.1| PREDICTED: selenoprotein K [Vitis vinifera] gi|147801093|emb|CAN71044.1| hypothetical protein VITISV_015657 [Vitis vinifera] Length = 102 Score = 98.6 bits (244), Expect = 7e-19 Identities = 55/101 (54%), Positives = 62/101 (61%), Gaps = 6/101 (5%) Frame = -3 Query: 464 MAYVERGVVQSKRSIWRLRTITDXXXXXXXXXXXXFGTLFSVDKSDAYKKS---GKKWDX 294 MAYVERGVV+S RSIWRLRTITD F T+FS++KSDAY+KS GKKWD Sbjct: 1 MAYVERGVVKSNRSIWRLRTITDFFWAIVNFIGVFFVTMFSMEKSDAYRKSSGSGKKWDG 60 Query: 293 XXXXXXXXXXXXXXXXXG---MDNVRGIDHSSLPACGSCCG 180 +DNVRGIDHS+LPACGSCCG Sbjct: 61 GGPGGPGRGPYGGGPRGPPRGLDNVRGIDHSALPACGSCCG 101 >ref|XP_002307425.1| predicted protein [Populus trichocarpa] gi|118485451|gb|ABK94582.1| unknown [Populus trichocarpa] gi|222856874|gb|EEE94421.1| predicted protein [Populus trichocarpa] Length = 100 Score = 98.2 bits (243), Expect = 9e-19 Identities = 55/100 (55%), Positives = 63/100 (63%), Gaps = 5/100 (5%) Frame = -3 Query: 464 MAYVERGVVQSKRSIWRLRTITDXXXXXXXXXXXXFGTLFSVDKSDAYKK---SGKKWD- 297 MAYVERGVV+S+RSIWRLRTITD F T+FS++K+DAY+K S KKWD Sbjct: 1 MAYVERGVVKSQRSIWRLRTITDFFWAIVNFIGVFFSTMFSMEKTDAYRKGSGSSKKWDG 60 Query: 296 -XXXXXXXXXXXXXXXXXXGMDNVRGIDHSSLPACGSCCG 180 G+DNVRGIDHSSLPACGSCCG Sbjct: 61 GPGGPGSGPYGGGPRGPPRGLDNVRGIDHSSLPACGSCCG 100 >ref|XP_004140863.1| PREDICTED: selenoprotein K-like [Cucumis sativus] gi|449522556|ref|XP_004168292.1| PREDICTED: selenoprotein K-like [Cucumis sativus] Length = 101 Score = 97.1 bits (240), Expect = 2e-18 Identities = 55/101 (54%), Positives = 63/101 (62%), Gaps = 6/101 (5%) Frame = -3 Query: 464 MAYVERGVVQSKRSIWRLRTITDXXXXXXXXXXXXFGTLFSVDKSDAYKK---SGKKWD- 297 MAYVERGVV+S+RS WRL+TITD F TLFS++KS+AY+K SGKKWD Sbjct: 1 MAYVERGVVKSQRSFWRLKTITDFFWAIVNVIGVFFTTLFSMEKSEAYRKGSGSGKKWDG 60 Query: 296 --XXXXXXXXXXXXXXXXXXGMDNVRGIDHSSLPACGSCCG 180 G+DNVRGIDHSSLPACGSCCG Sbjct: 61 GGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG 101