BLASTX nr result

ID: Coptis23_contig00011791 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00011791
         (592 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513776.1| conserved hypothetical protein [Ricinus comm...   100   3e-19
ref|XP_002301002.1| predicted protein [Populus trichocarpa] gi|1...    99   7e-19
ref|XP_002285840.1| PREDICTED: selenoprotein K [Vitis vinifera] ...    99   7e-19
ref|XP_002307425.1| predicted protein [Populus trichocarpa] gi|1...    98   9e-19
ref|XP_004140863.1| PREDICTED: selenoprotein K-like [Cucumis sat...    97   2e-18

>ref|XP_002513776.1| conserved hypothetical protein [Ricinus communis]
           gi|223546862|gb|EEF48359.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 100

 Score = 99.8 bits (247), Expect = 3e-19
 Identities = 56/100 (56%), Positives = 63/100 (63%), Gaps = 5/100 (5%)
 Frame = -3

Query: 464 MAYVERGVVQSKRSIWRLRTITDXXXXXXXXXXXXFGTLFSVDKSDAYKK---SGKKWD- 297
           MAYVERGVV+SK+SIWRLRTITD            F T+FS++KSDAY+K   S KKWD 
Sbjct: 1   MAYVERGVVKSKKSIWRLRTITDFFWAIINFIGVFFSTMFSMEKSDAYRKGSGSSKKWDG 60

Query: 296 -XXXXXXXXXXXXXXXXXXGMDNVRGIDHSSLPACGSCCG 180
                              G+DNVRGIDHSSLPACGSCCG
Sbjct: 61  GPGGPGSGPYGGGPRGPPRGLDNVRGIDHSSLPACGSCCG 100


>ref|XP_002301002.1| predicted protein [Populus trichocarpa] gi|118481555|gb|ABK92720.1|
           unknown [Populus trichocarpa]
           gi|222842728|gb|EEE80275.1| predicted protein [Populus
           trichocarpa]
          Length = 100

 Score = 98.6 bits (244), Expect = 7e-19
 Identities = 55/100 (55%), Positives = 63/100 (63%), Gaps = 5/100 (5%)
 Frame = -3

Query: 464 MAYVERGVVQSKRSIWRLRTITDXXXXXXXXXXXXFGTLFSVDKSDAYKK---SGKKWD- 297
           MAYVERGV++SKRSIWRLRTITD            F T+FS++K+DAY+K   S KKWD 
Sbjct: 1   MAYVERGVLKSKRSIWRLRTITDFFWAIVNLIGVFFSTMFSMEKTDAYRKGSGSSKKWDG 60

Query: 296 -XXXXXXXXXXXXXXXXXXGMDNVRGIDHSSLPACGSCCG 180
                              G+DNVRGIDHSSLPACGSCCG
Sbjct: 61  GPGGPGSGPYGGGPRGPPRGLDNVRGIDHSSLPACGSCCG 100


>ref|XP_002285840.1| PREDICTED: selenoprotein K [Vitis vinifera]
           gi|147801093|emb|CAN71044.1| hypothetical protein
           VITISV_015657 [Vitis vinifera]
          Length = 102

 Score = 98.6 bits (244), Expect = 7e-19
 Identities = 55/101 (54%), Positives = 62/101 (61%), Gaps = 6/101 (5%)
 Frame = -3

Query: 464 MAYVERGVVQSKRSIWRLRTITDXXXXXXXXXXXXFGTLFSVDKSDAYKKS---GKKWDX 294
           MAYVERGVV+S RSIWRLRTITD            F T+FS++KSDAY+KS   GKKWD 
Sbjct: 1   MAYVERGVVKSNRSIWRLRTITDFFWAIVNFIGVFFVTMFSMEKSDAYRKSSGSGKKWDG 60

Query: 293 XXXXXXXXXXXXXXXXXG---MDNVRGIDHSSLPACGSCCG 180
                                +DNVRGIDHS+LPACGSCCG
Sbjct: 61  GGPGGPGRGPYGGGPRGPPRGLDNVRGIDHSALPACGSCCG 101


>ref|XP_002307425.1| predicted protein [Populus trichocarpa] gi|118485451|gb|ABK94582.1|
           unknown [Populus trichocarpa]
           gi|222856874|gb|EEE94421.1| predicted protein [Populus
           trichocarpa]
          Length = 100

 Score = 98.2 bits (243), Expect = 9e-19
 Identities = 55/100 (55%), Positives = 63/100 (63%), Gaps = 5/100 (5%)
 Frame = -3

Query: 464 MAYVERGVVQSKRSIWRLRTITDXXXXXXXXXXXXFGTLFSVDKSDAYKK---SGKKWD- 297
           MAYVERGVV+S+RSIWRLRTITD            F T+FS++K+DAY+K   S KKWD 
Sbjct: 1   MAYVERGVVKSQRSIWRLRTITDFFWAIVNFIGVFFSTMFSMEKTDAYRKGSGSSKKWDG 60

Query: 296 -XXXXXXXXXXXXXXXXXXGMDNVRGIDHSSLPACGSCCG 180
                              G+DNVRGIDHSSLPACGSCCG
Sbjct: 61  GPGGPGSGPYGGGPRGPPRGLDNVRGIDHSSLPACGSCCG 100


>ref|XP_004140863.1| PREDICTED: selenoprotein K-like [Cucumis sativus]
           gi|449522556|ref|XP_004168292.1| PREDICTED:
           selenoprotein K-like [Cucumis sativus]
          Length = 101

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 55/101 (54%), Positives = 63/101 (62%), Gaps = 6/101 (5%)
 Frame = -3

Query: 464 MAYVERGVVQSKRSIWRLRTITDXXXXXXXXXXXXFGTLFSVDKSDAYKK---SGKKWD- 297
           MAYVERGVV+S+RS WRL+TITD            F TLFS++KS+AY+K   SGKKWD 
Sbjct: 1   MAYVERGVVKSQRSFWRLKTITDFFWAIVNVIGVFFTTLFSMEKSEAYRKGSGSGKKWDG 60

Query: 296 --XXXXXXXXXXXXXXXXXXGMDNVRGIDHSSLPACGSCCG 180
                               G+DNVRGIDHSSLPACGSCCG
Sbjct: 61  GGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG 101


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