BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00011788
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265699.1| PREDICTED: general transcription factor 3C p...    98   8e-29
emb|CBI24131.3| unnamed protein product [Vitis vinifera]               98   8e-29
ref|XP_003540640.1| PREDICTED: general transcription factor 3C p...    96   4e-28
ref|XP_003538968.1| PREDICTED: general transcription factor 3C p...    95   8e-28
ref|XP_004154797.1| PREDICTED: LOW QUALITY PROTEIN: general tran...    89   2e-26

>ref|XP_002265699.1| PREDICTED: general transcription factor 3C polypeptide 3-like [Vitis
            vinifera]
          Length = 1110

 Score = 98.2 bits (243), Expect(2) = 8e-29
 Identities = 48/78 (61%), Positives = 60/78 (76%)
 Frame = -2

Query: 325  NKHQCLAQVFAFLHNNLRLSDNSQ*KLLLEALYNIARVYQHVGLVTSAASYYEKVIATQV 146
            NKHQCLAQ  AFL+NNLRL +NSQ     EALYNIAR Y HVGLV+ A +YYEKV+AT  
Sbjct: 999  NKHQCLAQGLAFLYNNLRLCENSQ-----EALYNIARAYHHVGLVSLAVTYYEKVLATHE 1053

Query: 145  KVYPIPKMPIEDSSLPQS 92
            + YPIP++P E++ L ++
Sbjct: 1054 RDYPIPRLPYENTDLVEN 1071



 Score = 53.9 bits (128), Expect(2) = 8e-29
 Identities = 25/28 (89%), Positives = 27/28 (96%)
 Frame = -3

Query: 84   YCNLRREAACNLHLIYRKSGALDLARQV 1
            YC+LRREAA NLHLIY+KSGALDLARQV
Sbjct: 1076 YCDLRREAAYNLHLIYKKSGALDLARQV 1103


>emb|CBI24131.3| unnamed protein product [Vitis vinifera]
          Length = 915

 Score = 98.2 bits (243), Expect(2) = 8e-29
 Identities = 48/78 (61%), Positives = 60/78 (76%)
 Frame = -2

Query: 325  NKHQCLAQVFAFLHNNLRLSDNSQ*KLLLEALYNIARVYQHVGLVTSAASYYEKVIATQV 146
            NKHQCLAQ  AFL+NNLRL +NSQ     EALYNIAR Y HVGLV+ A +YYEKV+AT  
Sbjct: 804  NKHQCLAQGLAFLYNNLRLCENSQ-----EALYNIARAYHHVGLVSLAVTYYEKVLATHE 858

Query: 145  KVYPIPKMPIEDSSLPQS 92
            + YPIP++P E++ L ++
Sbjct: 859  RDYPIPRLPYENTDLVEN 876



 Score = 53.9 bits (128), Expect(2) = 8e-29
 Identities = 25/28 (89%), Positives = 27/28 (96%)
 Frame = -3

Query: 84  YCNLRREAACNLHLIYRKSGALDLARQV 1
           YC+LRREAA NLHLIY+KSGALDLARQV
Sbjct: 881 YCDLRREAAYNLHLIYKKSGALDLARQV 908


>ref|XP_003540640.1| PREDICTED: general transcription factor 3C polypeptide 3-like
            [Glycine max]
          Length = 919

 Score = 95.9 bits (237), Expect(2) = 4e-28
 Identities = 47/79 (59%), Positives = 58/79 (73%)
 Frame = -2

Query: 325  NKHQCLAQVFAFLHNNLRLSDNSQ*KLLLEALYNIARVYQHVGLVTSAASYYEKVIATQV 146
            NKHQC+ Q  AFL+NN+R+ +NSQ   L E+LYNIAR + HVGLVT AA YYEKVIA   
Sbjct: 803  NKHQCVVQGLAFLYNNMRICENSQVFFLQESLYNIARAFHHVGLVTLAAFYYEKVIAICE 862

Query: 145  KVYPIPKMPIEDSSLPQSH 89
            K YPIPK+P E+    ++H
Sbjct: 863  KDYPIPKLPNENPDSIETH 881



 Score = 53.9 bits (128), Expect(2) = 4e-28
 Identities = 25/28 (89%), Positives = 27/28 (96%)
 Frame = -3

Query: 84  YCNLRREAACNLHLIYRKSGALDLARQV 1
           YC+LRREAA NLHLIY+KSGALDLARQV
Sbjct: 885 YCDLRREAAYNLHLIYKKSGALDLARQV 912


>ref|XP_003538968.1| PREDICTED: general transcription factor 3C polypeptide 3-like
            [Glycine max]
          Length = 929

 Score = 94.7 bits (234), Expect(2) = 8e-28
 Identities = 47/80 (58%), Positives = 60/80 (75%), Gaps = 1/80 (1%)
 Frame = -2

Query: 325  NKHQCLAQVFAFLHNNLRLSDNSQ*KLLL-EALYNIARVYQHVGLVTSAASYYEKVIATQ 149
            NKHQC+ Q  AFL+NNLR+ +NSQ  + L E+LYNIAR + HVGLVT A  YYEKVIA  
Sbjct: 812  NKHQCVVQGLAFLYNNLRICENSQQLIFLQESLYNIARAFHHVGLVTLAVIYYEKVIAMC 871

Query: 148  VKVYPIPKMPIEDSSLPQSH 89
             + YPIPK+P E+S + ++H
Sbjct: 872  ERDYPIPKLPNENSDIIETH 891



 Score = 53.9 bits (128), Expect(2) = 8e-28
 Identities = 25/28 (89%), Positives = 27/28 (96%)
 Frame = -3

Query: 84  YCNLRREAACNLHLIYRKSGALDLARQV 1
           YC+LRREAA NLHLIY+KSGALDLARQV
Sbjct: 895 YCDLRREAAYNLHLIYKKSGALDLARQV 922


>ref|XP_004154797.1| PREDICTED: LOW QUALITY PROTEIN: general transcription factor 3C
           polypeptide 3-like [Cucumis sativus]
          Length = 627

 Score = 89.0 bits (219), Expect(2) = 2e-26
 Identities = 45/81 (55%), Positives = 59/81 (72%)
 Frame = -2

Query: 325 NKHQCLAQVFAFLHNNLRLSDNSQ*KLLLEALYNIARVYQHVGLVTSAASYYEKVIATQV 146
           NKHQC+AQ  AFL+ NL+L DN+Q   L EALYNIAR Y H+GLVT A +YYEKV+AT  
Sbjct: 513 NKHQCVAQGLAFLYKNLKLCDNNQ-VYLQEALYNIARAYHHIGLVTLAVTYYEKVLATYQ 571

Query: 145 KVYPIPKMPIEDSSLPQSHSI 83
           K  PIP++  E+ ++   +S+
Sbjct: 572 KDCPIPELFGENRNIKHQNSV 592



 Score = 55.5 bits (132), Expect(2) = 2e-26
 Identities = 26/33 (78%), Positives = 30/33 (90%)
 Frame = -3

Query: 99  HKVIVYCNLRREAACNLHLIYRKSGALDLARQV 1
           H+  VYC+LRREAA NLHLIY++SGALDLARQV
Sbjct: 588 HQNSVYCDLRREAAYNLHLIYKESGALDLARQV 620