BLASTX nr result

ID: Coptis23_contig00011764 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00011764
         (631 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281191.2| PREDICTED: probable peptidyl-tRNA hydrolase ...    90   5e-32
ref|XP_002516509.1| peptidyl-tRNA hydrolase, putative [Ricinus c...    87   2e-29
ref|XP_003603619.1| Peptidyl-tRNA hydrolase [Medicago truncatula...    79   5e-29
ref|XP_002309541.1| predicted protein [Populus trichocarpa] gi|1...    84   1e-28
ref|NP_001238456.1| uncharacterized protein LOC100527852 [Glycin...    82   2e-28

>ref|XP_002281191.2| PREDICTED: probable peptidyl-tRNA hydrolase 2-like [Vitis vinifera]
           gi|296081837|emb|CBI20842.3| unnamed protein product
           [Vitis vinifera]
          Length = 193

 Score = 89.7 bits (221), Expect(2) = 5e-32
 Identities = 45/50 (90%), Positives = 48/50 (96%)
 Frame = +3

Query: 456 KEMAESIGLPTFVVADAGRTQVMAGSKTVLAIGPGRKASVDSVTGKLRLL 605
           KE AESIGLPTFVVADAGRTQV++GSKTVLAIGPGRKASVDS+TGK RLL
Sbjct: 144 KEAAESIGLPTFVVADAGRTQVLSGSKTVLAIGPGRKASVDSITGKQRLL 193



 Score = 73.9 bits (180), Expect(2) = 5e-32
 Identities = 47/107 (43%), Positives = 52/107 (48%)
 Frame = +1

Query: 55  KLKQQRQQTSPGTDEDLKMVLVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGVGK 234
           K +QQ+Q  S  +DE+LKMVLVV                                MG GK
Sbjct: 63  KRQQQQQLVSSNSDEELKMVLVVRQDLK---------------------------MGTGK 95

Query: 235 IASQCAHAATGMYAXXXXXXXXXXXXXXXXGQPKIVVSCKNQQEMNK 375
           IASQCAHAATGMYA                GQ KIVV+CKNQQEMNK
Sbjct: 96  IASQCAHAATGMYAELVQSQRSLLRQWEQCGQAKIVVTCKNQQEMNK 142


>ref|XP_002516509.1| peptidyl-tRNA hydrolase, putative [Ricinus communis]
           gi|223544329|gb|EEF45850.1| peptidyl-tRNA hydrolase,
           putative [Ricinus communis]
          Length = 195

 Score = 87.4 bits (215), Expect(2) = 2e-29
 Identities = 44/50 (88%), Positives = 48/50 (96%)
 Frame = +3

Query: 456 KEMAESIGLPTFVVADAGRTQVMAGSKTVLAIGPGRKASVDSVTGKLRLL 605
           +E A+SIGLPTFVVADAGRTQV+AGSKTVLAIGPG KASVD+VTGKLRLL
Sbjct: 146 QEAADSIGLPTFVVADAGRTQVLAGSKTVLAIGPGSKASVDAVTGKLRLL 195



 Score = 67.8 bits (164), Expect(2) = 2e-29
 Identities = 50/125 (40%), Positives = 56/125 (44%)
 Frame = +1

Query: 1   PKKNSNGRKTIPFPTSSNKLKQQRQQTSPGTDEDLKMVLVVXXXXXXXXXXXXXXXXXXX 180
           P KNS  +K       S K  QQ+   S   D +LKMVLVV                   
Sbjct: 53  PIKNSFKKKNF-----SGK-SQQQSLVSYNGDPELKMVLVVRQDLK-------------- 92

Query: 181 XXXXXXXXXXXXXMGVGKIASQCAHAATGMYAXXXXXXXXXXXXXXXXGQPKIVVSCKNQ 360
                        MG GKIASQCAHAATGMY+                GQPKIVV+C+NQ
Sbjct: 93  -------------MGAGKIASQCAHAATGMYSELMQSQQLLLSRWEQCGQPKIVVTCRNQ 139

Query: 361 QEMNK 375
           QEMNK
Sbjct: 140 QEMNK 144


>ref|XP_003603619.1| Peptidyl-tRNA hydrolase [Medicago truncatula]
           gi|355492667|gb|AES73870.1| Peptidyl-tRNA hydrolase
           [Medicago truncatula] gi|388514387|gb|AFK45255.1|
           unknown [Medicago truncatula]
          Length = 193

 Score = 79.3 bits (194), Expect(2) = 5e-29
 Identities = 40/49 (81%), Positives = 44/49 (89%)
 Frame = +3

Query: 459 EMAESIGLPTFVVADAGRTQVMAGSKTVLAIGPGRKASVDSVTGKLRLL 605
           E AESIGLPTFVV+DAGRTQV AGSKTVLA+GPG KA +DSVTG+L LL
Sbjct: 145 EAAESIGLPTFVVSDAGRTQVSAGSKTVLAVGPGPKAILDSVTGRLSLL 193



 Score = 74.3 bits (181), Expect(2) = 5e-29
 Identities = 48/110 (43%), Positives = 53/110 (48%)
 Frame = +1

Query: 46  SSNKLKQQRQQTSPGTDEDLKMVLVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMG 225
           SS KL+ Q   +S G D++LKMVLVV                                M 
Sbjct: 60  SSTKLQNQLSVSSNGADQELKMVLVVRQDLK---------------------------MK 92

Query: 226 VGKIASQCAHAATGMYAXXXXXXXXXXXXXXXXGQPKIVVSCKNQQEMNK 375
            GKIASQCAHAATGMYA                GQPKIVV+CKNQQEMNK
Sbjct: 93  SGKIASQCAHAATGMYAELMRSNRSLLRQWEQCGQPKIVVTCKNQQEMNK 142


>ref|XP_002309541.1| predicted protein [Populus trichocarpa] gi|118485090|gb|ABK94408.1|
           unknown [Populus trichocarpa]
           gi|222855517|gb|EEE93064.1| predicted protein [Populus
           trichocarpa]
          Length = 190

 Score = 83.6 bits (205), Expect(2) = 1e-28
 Identities = 42/50 (84%), Positives = 45/50 (90%)
 Frame = +3

Query: 456 KEMAESIGLPTFVVADAGRTQVMAGSKTVLAIGPGRKASVDSVTGKLRLL 605
           +E AE+IGLPTF VADAGRTQV AGSKTVLA+GPG K SVDSVTGKLRLL
Sbjct: 141 REAAENIGLPTFAVADAGRTQVSAGSKTVLAVGPGPKESVDSVTGKLRLL 190



 Score = 68.9 bits (167), Expect(2) = 1e-28
 Identities = 49/125 (39%), Positives = 55/125 (44%)
 Frame = +1

Query: 1   PKKNSNGRKTIPFPTSSNKLKQQRQQTSPGTDEDLKMVLVVXXXXXXXXXXXXXXXXXXX 180
           P KN   +K    P  S      +QQ+    D++LKMV VV                   
Sbjct: 49  PSKNQTKKKNF-LPGKS------QQQSLEDGDKELKMVFVVRQDLK-------------- 87

Query: 181 XXXXXXXXXXXXXMGVGKIASQCAHAATGMYAXXXXXXXXXXXXXXXXGQPKIVVSCKNQ 360
                        MG GKIASQCAHAATGMYA                GQPKIVV+CKNQ
Sbjct: 88  -------------MGAGKIASQCAHAATGMYAELIYSHRILLRQWEQSGQPKIVVTCKNQ 134

Query: 361 QEMNK 375
           QEMNK
Sbjct: 135 QEMNK 139


>ref|NP_001238456.1| uncharacterized protein LOC100527852 [Glycine max]
           gi|255633376|gb|ACU17045.1| unknown [Glycine max]
          Length = 196

 Score = 82.4 bits (202), Expect(2) = 2e-28
 Identities = 42/49 (85%), Positives = 45/49 (91%)
 Frame = +3

Query: 459 EMAESIGLPTFVVADAGRTQVMAGSKTVLAIGPGRKASVDSVTGKLRLL 605
           E AESIGLPTFVVADAGRTQV AGSKTVLA+GPG K+SVDSVTG+L LL
Sbjct: 148 EAAESIGLPTFVVADAGRTQVSAGSKTVLAVGPGPKSSVDSVTGRLPLL 196



 Score = 68.9 bits (167), Expect(2) = 2e-28
 Identities = 45/110 (40%), Positives = 52/110 (47%)
 Frame = +1

Query: 46  SSNKLKQQRQQTSPGTDEDLKMVLVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMG 225
           SS + +QQ+   S   D++LKMVLVV                                M 
Sbjct: 63  SSARPQQQQISVSSNADQELKMVLVVRQDLK---------------------------MK 95

Query: 226 VGKIASQCAHAATGMYAXXXXXXXXXXXXXXXXGQPKIVVSCKNQQEMNK 375
            GKIASQCAHAATGMYA                GQPKIVV+C+NQQEMNK
Sbjct: 96  SGKIASQCAHAATGMYAELMQSDRYLLRRWEQCGQPKIVVTCRNQQEMNK 145


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