BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00011738
         (1000 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pen...   360   4e-97
emb|CBI17645.3| unnamed protein product [Vitis vinifera]              360   4e-97
emb|CAN82640.1| hypothetical protein VITISV_028821 [Vitis vinifera]   360   4e-97
ref|XP_002514857.1| pentatricopeptide repeat-containing protein,...   340   2e-91
ref|XP_003552441.1| PREDICTED: putative pentatricopeptide repeat...   337   3e-90

>ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g23330 [Vitis vinifera]
          Length = 1008

 Score =  360 bits (923), Expect = 4e-97
 Identities = 195/251 (77%), Positives = 206/251 (82%)
 Frame = +2

Query: 95  DLGRRSKIVFEDNENDTDPDLAVLKDTTHLDLSDTVGLGILDAFFASLSMILVSEIGDET 274
           DLGRRSKIV ED E +T  D     D+  LDLS   GLG+ DAFFASLSMI+VSEIGDET
Sbjct: 42  DLGRRSKIVLEDLEVETTGDKKD-PDSISLDLSLDSGLGVFDAFFASLSMIIVSEIGDET 100

Query: 275 FIIAALMAMRHPKSIVLSGALSALVVMTVLSTGLGRIVPNLISRKHTNSAATVLYAFFGL 454
           FIIAALMAMRHPKSIVLSGALSAL+VMTVLSTGLGRIVPNLISRKHTNSAATVLYAFFGL
Sbjct: 101 FIIAALMAMRHPKSIVLSGALSALIVMTVLSTGLGRIVPNLISRKHTNSAATVLYAFFGL 160

Query: 455 RLLYIAWRSDSKASQXXXXXXXXXXXXTQQGKTASRRFFSRFCTPIFLESFVLTFLAEWG 634
           RLLYIAWRSDSKASQ            + QGKT+ RRFFSRFCTPIFLESF+LTFLAEWG
Sbjct: 161 RLLYIAWRSDSKASQKKEMEEVEEKLESGQGKTSFRRFFSRFCTPIFLESFILTFLAEWG 220

Query: 635 DRSQIATIALATHKNAIGVAVGATLGHTVCTSIAVVGGSMLASKISQGTVATVXXXXXXX 814
           DRSQIATIALATHKNAIGVAVGAT+GHT+CTS+AVVGGSMLASKISQGTVATV       
Sbjct: 221 DRSQIATIALATHKNAIGVAVGATIGHTICTSLAVVGGSMLASKISQGTVATVGGLLFLG 280

Query: 815 XXXXXXXXPPL 847
                   PPL
Sbjct: 281 FSLSSYFYPPL 291


>emb|CBI17645.3| unnamed protein product [Vitis vinifera]
          Length = 291

 Score =  360 bits (923), Expect = 4e-97
 Identities = 195/251 (77%), Positives = 206/251 (82%)
 Frame = +2

Query: 95  DLGRRSKIVFEDNENDTDPDLAVLKDTTHLDLSDTVGLGILDAFFASLSMILVSEIGDET 274
           DLGRRSKIV ED E +T  D     D+  LDLS   GLG+ DAFFASLSMI+VSEIGDET
Sbjct: 42  DLGRRSKIVLEDLEVETTGDKKD-PDSISLDLSLDSGLGVFDAFFASLSMIIVSEIGDET 100

Query: 275 FIIAALMAMRHPKSIVLSGALSALVVMTVLSTGLGRIVPNLISRKHTNSAATVLYAFFGL 454
           FIIAALMAMRHPKSIVLSGALSAL+VMTVLSTGLGRIVPNLISRKHTNSAATVLYAFFGL
Sbjct: 101 FIIAALMAMRHPKSIVLSGALSALIVMTVLSTGLGRIVPNLISRKHTNSAATVLYAFFGL 160

Query: 455 RLLYIAWRSDSKASQXXXXXXXXXXXXTQQGKTASRRFFSRFCTPIFLESFVLTFLAEWG 634
           RLLYIAWRSDSKASQ            + QGKT+ RRFFSRFCTPIFLESF+LTFLAEWG
Sbjct: 161 RLLYIAWRSDSKASQKKEMEEVEEKLESGQGKTSFRRFFSRFCTPIFLESFILTFLAEWG 220

Query: 635 DRSQIATIALATHKNAIGVAVGATLGHTVCTSIAVVGGSMLASKISQGTVATVXXXXXXX 814
           DRSQIATIALATHKNAIGVAVGAT+GHT+CTS+AVVGGSMLASKISQGTVATV       
Sbjct: 221 DRSQIATIALATHKNAIGVAVGATIGHTICTSLAVVGGSMLASKISQGTVATVGGLLFLG 280

Query: 815 XXXXXXXXPPL 847
                   PPL
Sbjct: 281 FSLSSYFYPPL 291


>emb|CAN82640.1| hypothetical protein VITISV_028821 [Vitis vinifera]
          Length = 291

 Score =  360 bits (923), Expect = 4e-97
 Identities = 195/251 (77%), Positives = 206/251 (82%)
 Frame = +2

Query: 95  DLGRRSKIVFEDNENDTDPDLAVLKDTTHLDLSDTVGLGILDAFFASLSMILVSEIGDET 274
           DLGRRSKIV ED E +T  D     D+  LDLS   GLG+ DAFFASLSMI+VSEIGDET
Sbjct: 42  DLGRRSKIVLEDLEVETTGDKKD-PDSISLDLSLDSGLGVFDAFFASLSMIIVSEIGDET 100

Query: 275 FIIAALMAMRHPKSIVLSGALSALVVMTVLSTGLGRIVPNLISRKHTNSAATVLYAFFGL 454
           FIIAALMAMRHPKSIVLSGALSAL+VMTVLSTGLGRIVPNLISRKHTNSAATVLYAFFGL
Sbjct: 101 FIIAALMAMRHPKSIVLSGALSALIVMTVLSTGLGRIVPNLISRKHTNSAATVLYAFFGL 160

Query: 455 RLLYIAWRSDSKASQXXXXXXXXXXXXTQQGKTASRRFFSRFCTPIFLESFVLTFLAEWG 634
           RLLYIAWRSDSKASQ            + QGKT+ RRFFSRFCTPIFLESF+LTFLAEWG
Sbjct: 161 RLLYIAWRSDSKASQKKEMEEVEEKLESGQGKTSFRRFFSRFCTPIFLESFILTFLAEWG 220

Query: 635 DRSQIATIALATHKNAIGVAVGATLGHTVCTSIAVVGGSMLASKISQGTVATVXXXXXXX 814
           DRSQIATIALATHKNAIGVAVGAT+GHT+CTS+AVVGGSMLASKISQGTVATV       
Sbjct: 221 DRSQIATIALATHKNAIGVAVGATIGHTICTSLAVVGGSMLASKISQGTVATVGGLLFLG 280

Query: 815 XXXXXXXXPPL 847
                   PPL
Sbjct: 281 FSLSSYFYPPL 291


>ref|XP_002514857.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545908|gb|EEF47411.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 832

 Score =  340 bits (873), Expect = 2e-91
 Identities = 183/260 (70%), Positives = 201/260 (77%)
 Frame = +2

Query: 68  QEAGKRPLRDLGRRSKIVFEDNENDTDPDLAVLKDTTHLDLSDTVGLGILDAFFASLSMI 247
           +E     ++DLGRR  IV +D + ++           +L L    GLG+ DAF ASLSMI
Sbjct: 34  KEESTASIKDLGRRGMIVTKDIDGNS----------VNLGLHVDSGLGVFDAFIASLSMI 83

Query: 248 LVSEIGDETFIIAALMAMRHPKSIVLSGALSALVVMTVLSTGLGRIVPNLISRKHTNSAA 427
           +VSEIGDETFIIAALMAMRHPKSIVLSGAL+AL+VMTVLSTGLGRIVPNLISRKHTNSAA
Sbjct: 84  IVSEIGDETFIIAALMAMRHPKSIVLSGALTALIVMTVLSTGLGRIVPNLISRKHTNSAA 143

Query: 428 TVLYAFFGLRLLYIAWRSDSKASQXXXXXXXXXXXXTQQGKTASRRFFSRFCTPIFLESF 607
           TVLYAFFGLRLLYIAWRSDSK SQ            + QGKT  RRFFSRFCTPIFLESF
Sbjct: 144 TVLYAFFGLRLLYIAWRSDSKVSQKKEMEEVEEKLESGQGKTTFRRFFSRFCTPIFLESF 203

Query: 608 VLTFLAEWGDRSQIATIALATHKNAIGVAVGATLGHTVCTSIAVVGGSMLASKISQGTVA 787
           +LTFLAEWGDRSQIATIALATHKNAIGVAVGAT+GHT+CTS+AVVGGSMLASKISQGTVA
Sbjct: 204 ILTFLAEWGDRSQIATIALATHKNAIGVAVGATIGHTICTSLAVVGGSMLASKISQGTVA 263

Query: 788 TVXXXXXXXXXXXXXXXPPL 847
           T+               PPL
Sbjct: 264 TIGGLLFLGFSLSSYFYPPL 283


>ref|XP_003552441.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Glycine max]
          Length = 1011

 Score =  337 bits (864), Expect = 3e-90
 Identities = 184/252 (73%), Positives = 198/252 (78%), Gaps = 1/252 (0%)
 Frame = +2

Query: 95  DLGRRSKIVFEDNENDTDPDLAVLKDTTHLDLSDTVGLGILDAFFASLSMILVSEIGDET 274
           DLGRR+KI   D END+   L +          D+ G G+ DAFFAS SMILVSEIGDET
Sbjct: 48  DLGRRAKIALNDIENDSILSLGL----------DSTGPGLFDAFFASFSMILVSEIGDET 97

Query: 275 FIIAALMAMRHPKSIVLSGALSALVVMTVLSTGLGRIVPNLISRKHTNSAATVLYAFFGL 454
           FIIAALMAMRHPKSIVLSGALSAL++MTVLSTGLGRIVPNLISRKHTNSAATVLYAFFGL
Sbjct: 98  FIIAALMAMRHPKSIVLSGALSALIIMTVLSTGLGRIVPNLISRKHTNSAATVLYAFFGL 157

Query: 455 RLLYIAWR-SDSKASQXXXXXXXXXXXXTQQGKTASRRFFSRFCTPIFLESFVLTFLAEW 631
           RLLYIAWR SDSK+SQ              QGKT+ RRFFSRFCTPIFLESF+LTFLAEW
Sbjct: 158 RLLYIAWRSSDSKSSQKKEMEEVEEKLDGGQGKTSVRRFFSRFCTPIFLESFILTFLAEW 217

Query: 632 GDRSQIATIALATHKNAIGVAVGATLGHTVCTSIAVVGGSMLASKISQGTVATVXXXXXX 811
           GDRSQIATIALATHKNAIGVAVGAT+GHT+CTS+AVVGGSMLASKISQ +VATV      
Sbjct: 218 GDRSQIATIALATHKNAIGVAVGATIGHTICTSLAVVGGSMLASKISQRSVATVGGLLFI 277

Query: 812 XXXXXXXXXPPL 847
                    PPL
Sbjct: 278 GFSISSYFYPPL 289