BLASTX nr result

ID: Coptis23_contig00011736 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00011736
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004138156.1| PREDICTED: ABC transporter A family member 7...   112   3e-23
ref|XP_002274303.1| PREDICTED: ABC transporter A family member 7...   105   5e-21
ref|XP_002460107.1| hypothetical protein SORBIDRAFT_02g022870 [S...   103   1e-20
ref|XP_002511544.1| abc transporter, putative [Ricinus communis]...   102   3e-20
ref|XP_003576447.1| PREDICTED: ABC transporter A family member 7...   102   4e-20

>ref|XP_004138156.1| PREDICTED: ABC transporter A family member 7-like [Cucumis sativus]
           gi|449477292|ref|XP_004154983.1| PREDICTED: ABC
           transporter A family member 7-like [Cucumis sativus]
          Length = 947

 Score =  112 bits (280), Expect = 3e-23
 Identities = 48/89 (53%), Positives = 63/89 (70%)
 Frame = +3

Query: 84  GPASFMTQANALLRKNITFQKRNLKSNLGLVAFPXXXXXXXXXXXXXXNNEFDKASNKCG 263
           GPASF TQANALLRKN+T+QKRN+ +N+ L+ FP              +NE DK   +CG
Sbjct: 7   GPASFWTQANALLRKNLTYQKRNMNANVRLILFPFLLCLLLVLIQSLVDNELDKPKFRCG 66

Query: 264 CACVDRNGDGTCDEVCGIEYSSLDQVGAC 350
           CAC+D NGDG C+EVCG+++S+LDQ  +C
Sbjct: 67  CACIDTNGDGRCEEVCGVQFSTLDQASSC 95


>ref|XP_002274303.1| PREDICTED: ABC transporter A family member 7 [Vitis vinifera]
          Length = 949

 Score =  105 bits (261), Expect = 5e-21
 Identities = 52/95 (54%), Positives = 65/95 (68%)
 Frame = +3

Query: 66  MEGSTHGPASFMTQANALLRKNITFQKRNLKSNLGLVAFPXXXXXXXXXXXXXXNNEFDK 245
           M  S+ GPASF TQANALLRKN+TFQKRN+++N+ LV+FP              N+E DK
Sbjct: 1   MADSSSGPASFWTQANALLRKNLTFQKRNIRTNIRLVSFPILLCVLLVVIQKLVNSELDK 60

Query: 246 ASNKCGCACVDRNGDGTCDEVCGIEYSSLDQVGAC 350
           A NKCGC  V  N +G  ++ CGI+YS+LDQVG C
Sbjct: 61  AENKCGCISV-TNENGQTEKRCGIQYSTLDQVGTC 94


>ref|XP_002460107.1| hypothetical protein SORBIDRAFT_02g022870 [Sorghum bicolor]
           gi|241923484|gb|EER96628.1| hypothetical protein
           SORBIDRAFT_02g022870 [Sorghum bicolor]
          Length = 910

 Score =  103 bits (258), Expect = 1e-20
 Identities = 50/93 (53%), Positives = 62/93 (66%), Gaps = 1/93 (1%)
 Frame = +3

Query: 75  STHGPASFMTQANALLRKNITFQKRNLKSNLGLVAFPXXXXXXXXXXXXXXNNEFDKASN 254
           S  GPASF TQANALLRKN++ QKRNLK+N+G+  FP              NNE DK   
Sbjct: 3   SPRGPASFATQANALLRKNLSVQKRNLKTNIGITFFPILICVLLIVLQNIINNELDKPKY 62

Query: 255 KCGCACVDRNGDGTC-DEVCGIEYSSLDQVGAC 350
           KCGC C++ + DG C  + CGI+YS+LDQVG+C
Sbjct: 63  KCGCVCLETSLDGRCARKQCGIQYSTLDQVGSC 95


>ref|XP_002511544.1| abc transporter, putative [Ricinus communis]
           gi|223550659|gb|EEF52146.1| abc transporter, putative
           [Ricinus communis]
          Length = 984

 Score =  102 bits (254), Expect = 3e-20
 Identities = 46/92 (50%), Positives = 62/92 (67%)
 Frame = +3

Query: 75  STHGPASFMTQANALLRKNITFQKRNLKSNLGLVAFPXXXXXXXXXXXXXXNNEFDKASN 254
           S+HGPA+F  QA+ALLRKN+TFQKRN+K+N  L+ FP              + E +K S 
Sbjct: 42  SSHGPATFWNQADALLRKNLTFQKRNVKTNCRLIFFPFVLCVLLVITQNLLDRELNKPSR 101

Query: 255 KCGCACVDRNGDGTCDEVCGIEYSSLDQVGAC 350
           KCGC  +D +GDG  ++VCG++YS+LDQV  C
Sbjct: 102 KCGCVDIDTDGDGRLEKVCGLQYSTLDQVATC 133


>ref|XP_003576447.1| PREDICTED: ABC transporter A family member 7-like [Brachypodium
           distachyon]
          Length = 945

 Score =  102 bits (253), Expect = 4e-20
 Identities = 49/93 (52%), Positives = 61/93 (65%), Gaps = 1/93 (1%)
 Frame = +3

Query: 75  STHGPASFMTQANALLRKNITFQKRNLKSNLGLVAFPXXXXXXXXXXXXXXNNEFDKASN 254
           S   PASF+TQANALLRKN+  QKRNLK+N+G+  FP              NNE DK   
Sbjct: 3   SPRSPASFLTQANALLRKNLCLQKRNLKTNIGITVFPILICVLLVVLQNVINNELDKPKY 62

Query: 255 KCGCACVDRNGDGTCDE-VCGIEYSSLDQVGAC 350
            CGCACV+ N DG+C +  CGI+YS+L+QV +C
Sbjct: 63  HCGCACVETNLDGSCKKRECGIQYSTLEQVWSC 95


Top