BLASTX nr result

ID: Coptis23_contig00011730 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00011730
         (1262 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002875200.1| hypothetical protein ARALYDRAFT_484241 [Arab...   176   9e-42
ref|NP_187787.1| uncharacterized protein [Arabidopsis thaliana] ...   173   1e-40
ref|XP_002311324.1| predicted protein [Populus trichocarpa] gi|2...   171   5e-40
ref|XP_003607769.1| hypothetical protein MTR_4g082550 [Medicago ...   163   8e-38
ref|XP_003556716.1| PREDICTED: uncharacterized protein LOC100791...   160   6e-37

>ref|XP_002875200.1| hypothetical protein ARALYDRAFT_484241 [Arabidopsis lyrata subsp.
           lyrata] gi|297321038|gb|EFH51459.1| hypothetical protein
           ARALYDRAFT_484241 [Arabidopsis lyrata subsp. lyrata]
          Length = 344

 Score =  176 bits (447), Expect = 9e-42
 Identities = 104/237 (43%), Positives = 136/237 (57%), Gaps = 11/237 (4%)
 Frame = +2

Query: 131 ASASITYSVYHAFYDRPVKLVSALGSLSNSFFRLFATFFCGQVMVFAGLIVLGLVCFGVI 310
           A  SI YSV+  FY RPVK +SA+ S   SF  L AT      +V    ++LG++ F + 
Sbjct: 105 AIGSIAYSVFQGFYGRPVKFISAVKSSVASFLPLLATLISSNFIVLGVFLILGILAFLLT 164

Query: 311 RGFEYLG---YEIGDFKXXXXXXXXXXXXXXXCLQVNWVLAPVIVVVESSWGLEPLRRSA 481
           +  E +    Y    F+                L VNW+LA V+VVVES+WGL PL+RS 
Sbjct: 165 KLIEIIPGVYYSSSYFQGFIIVVTIMSIAITIKLYVNWILAWVVVVVESAWGLTPLKRSN 224

Query: 482 YLVKEMRWVVVCMLLYFGGIGWLFVW-----GSWQFSVGEG---VLRGVMFVVQTVLVSA 637
            LVK M+ V + ++ +F     + VW      S Q +  E    +     FVVQ V+ SA
Sbjct: 225 SLVKGMKGVSLSIIFFFASTESILVWISTLAASAQLNDDENGGKLWTNAFFVVQIVITSA 284

Query: 638 LLTMVMLHCVAVNTVLYMYCKALHGELAGEIAEEFAREYVSLPFDDEKVPHLVSFVH 808
            LT++ L+ +A  TV+YMYCKA+HGEL  EIAEEFAREYVSLPFDD KVPHLVS  +
Sbjct: 285 FLTLLTLYNLAATTVMYMYCKAVHGELVWEIAEEFAREYVSLPFDDGKVPHLVSVAY 341


>ref|NP_187787.1| uncharacterized protein [Arabidopsis thaliana]
           gi|6671937|gb|AAF23197.1|AC016795_10 unknown protein
           [Arabidopsis thaliana] gi|332641580|gb|AEE75101.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 348

 Score =  173 bits (438), Expect = 1e-40
 Identities = 102/239 (42%), Positives = 135/239 (56%), Gaps = 13/239 (5%)
 Frame = +2

Query: 131 ASASITYSVYHAFYDRPVKLVSALGSLSNSFFRLFATFFCGQVMVFAGLIVLGLVCFGVI 310
           A  SI YSV+  FY RPVKL SA+ S   SF  L AT     ++V  G ++ G++ F ++
Sbjct: 107 AIGSIAYSVFQGFYGRPVKLNSAVKSSFASFLPLLATLTSSNLIVLGGFLIPGILAFLLV 166

Query: 311 RGFEYL-----GYEIGDFKXXXXXXXXXXXXXXXCLQVNWVLAPVIVVVESSWGLEPLRR 475
           +  E +      Y    F+                L VNW+LA V+VVVES+WG+ PL+R
Sbjct: 167 KLIETIPGVEFDYASSYFQGFVTLVTIISIAIAVKLYVNWILAWVVVVVESAWGITPLKR 226

Query: 476 SAYLVKEMRWVVVCMLLYFGGIGWLFVWGSWQFSV--------GEGVLRGVMFVVQTVLV 631
           S  LVK M+   + ++ +F     + VW S   +         G        FVVQ V+ 
Sbjct: 227 SKRLVKGMKCASLSIIFFFASTESILVWISTLAAYAQLNDNENGGKSWTDAFFVVQIVIT 286

Query: 632 SALLTMVMLHCVAVNTVLYMYCKALHGELAGEIAEEFAREYVSLPFDDEKVPHLVSFVH 808
           SA LT++ L+ +A  TV+YMYCKA+HGEL  EIAEEFAREYVSLPFDD KVPHLVS  +
Sbjct: 287 SAFLTLLTLYNLAATTVMYMYCKAVHGELVWEIAEEFAREYVSLPFDDGKVPHLVSVAY 345


>ref|XP_002311324.1| predicted protein [Populus trichocarpa] gi|222851144|gb|EEE88691.1|
           predicted protein [Populus trichocarpa]
          Length = 333

 Score =  171 bits (432), Expect = 5e-40
 Identities = 108/236 (45%), Positives = 136/236 (57%), Gaps = 10/236 (4%)
 Frame = +2

Query: 131 ASASITYSVYHAFYDRPVKLVSALGSLSNSFFRLFATFFCGQVMVFAGLIVLGLVCFGVI 310
           A  SITYSV H FY RPVKL S++ S   SFF L  T    +++    L+   L+ F VI
Sbjct: 97  ALGSITYSVIHGFYGRPVKLWSSIKSAFTSFFPLLITGSFVEIIFLGVLLPFVLLLFFVI 156

Query: 311 RGFEYLGYEIGD----FKXXXXXXXXXXXXXXXCLQVNWVLAPVIVVVESSWGLEPLRRS 478
            G +  G+EI      F                 LQ+ W+LA VIVV ESSWGLEPLRRS
Sbjct: 157 NGIQLPGFEINVSSPYFIVFLVILGVVLVFVLLHLQLKWILAQVIVVAESSWGLEPLRRS 216

Query: 479 AYLVKEMRWVVVCMLLYFGGIGWLFVWGS---WQ-FSVG--EGVLRGVMFVVQTVLVSAL 640
            YL+K M+ V + M+L+FG    L V  S   W+   VG  +   +   FVV+ V+ SAL
Sbjct: 217 DYLMKRMKGVALSMVLFFGFFSGLLVIASSFPWEGLHVGNIDSAWKIWPFVVRIVVTSAL 276

Query: 641 LTMVMLHCVAVNTVLYMYCKALHGELAGEIAEEFAREYVSLPFDDEKVPHLVSFVH 808
             ++ L+ +A   VLYM CKA+HGEL  EIAEEFA +YVSLPFDD K PH VS  +
Sbjct: 277 QMVLQLYNIAAFAVLYMDCKAVHGELVLEIAEEFAGDYVSLPFDDGKTPHFVSVAY 332


>ref|XP_003607769.1| hypothetical protein MTR_4g082550 [Medicago truncatula]
           gi|355508824|gb|AES89966.1| hypothetical protein
           MTR_4g082550 [Medicago truncatula]
          Length = 339

 Score =  163 bits (413), Expect = 8e-38
 Identities = 90/228 (39%), Positives = 135/228 (59%), Gaps = 4/228 (1%)
 Frame = +2

Query: 137 ASITYSVYHAFYDRPVKLVSALGSLSNSFFRLFATFFCGQVMVFAGLIVLGLVCFGVIRG 316
           A+IT+SV+H F+ RPVKL+S + SL +SF  L  T     +++F   + + L+       
Sbjct: 120 ATITHSVFHGFFGRPVKLLSTVTSLLSSFLPLLTTTILSHLILFTISLPIPLL------- 172

Query: 317 FEYLGYEIGDF-KXXXXXXXXXXXXXXXCLQVNWVLAPVIVVVESSWGLEPLRRSAYLVK 493
              L +   +  +                ++++W L+ VI +VE+++G++PLRRSA+L+ 
Sbjct: 173 --RLSFSFSEIIRTVSAILVLALSLLIFYIRISWTLSSVIAIVENTYGIQPLRRSAHLMN 230

Query: 494 EMRWVVVCMLLYFGGIGWLFVWGSWQFS---VGEGVLRGVMFVVQTVLVSALLTMVMLHC 664
            M++       +F  +  + +W  +  +      G  R   F+VQ VL SA++T++ML+ 
Sbjct: 231 GMKYTGASCFFFFASLEGIMLWSGFLLARVVSDSGSWRDWAFMVQIVLTSAVMTVLMLYN 290

Query: 665 VAVNTVLYMYCKALHGELAGEIAEEFAREYVSLPFDDEKVPHLVSFVH 808
            A NTVLYMYCKALHGELA EI EEFA +YVSLPFDD KVPH+VS VH
Sbjct: 291 AAANTVLYMYCKALHGELAEEIVEEFAWQYVSLPFDDGKVPHVVSVVH 338


>ref|XP_003556716.1| PREDICTED: uncharacterized protein LOC100791310 [Glycine max]
          Length = 320

 Score =  160 bits (405), Expect = 6e-37
 Identities = 102/228 (44%), Positives = 129/228 (56%), Gaps = 3/228 (1%)
 Frame = +2

Query: 131 ASASITYSVYHAFYDRPVKLVSALGSLSNSFFRLFATFFCGQVMVFAGLIVLGLVCFGVI 310
           A ASIT+SV+H F+ RPVKL SAL S++ SF  L  T F         LI+L L    + 
Sbjct: 102 ALASITHSVFHGFFGRPVKLPSALLSVATSFLPLLVTSF------ITNLILLSLSLPAI- 154

Query: 311 RGFEYLGYEIGDFKXXXXXXXXXXXXXXXCLQVNWVLAPVIVVVESSWG-LEPLRRSAYL 487
               +L                        L+V+W LA V+ V ES+ G L PLRRSA+L
Sbjct: 155 ----FLFSTTSSSSILVAISAVLVLLAIVYLRVSWSLASVVAVTESTCGALHPLRRSAFL 210

Query: 488 VKEMRWVVVCMLLYFGGIGWLFVWGSWQFSVGEG--VLRGVMFVVQTVLVSALLTMVMLH 661
            K MR +     L+FG +  + +W +    VG      +   FVVQ VL S LL ++ML+
Sbjct: 211 TKGMRTLAASCFLFFGSLQTILLWTASMLVVGSDGWAWKDWAFVVQIVLTSTLLVLLMLY 270

Query: 662 CVAVNTVLYMYCKALHGELAGEIAEEFAREYVSLPFDDEKVPHLVSFV 805
             A +TVLYMYCKA+HGELA EIAEEFA +YV LPFDD KVPH+VS V
Sbjct: 271 NAAADTVLYMYCKAVHGELALEIAEEFAWQYVCLPFDDGKVPHVVSVV 318


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