BLASTX nr result

ID: Coptis23_contig00011714 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00011714
         (1692 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633259.1| PREDICTED: uncharacterized protein LOC100243...   556   e-156
emb|CBI22058.3| unnamed protein product [Vitis vinifera]              540   e-151
ref|XP_002323191.1| predicted protein [Populus trichocarpa] gi|2...   503   e-140
ref|XP_002522590.1| protein binding protein, putative [Ricinus c...   490   e-136
ref|XP_003563408.1| PREDICTED: uncharacterized protein LOC100839...   468   e-129

>ref|XP_003633259.1| PREDICTED: uncharacterized protein LOC100243829 [Vitis vinifera]
          Length = 522

 Score =  556 bits (1432), Expect = e-156
 Identities = 295/438 (67%), Positives = 334/438 (76%), Gaps = 5/438 (1%)
 Frame = +3

Query: 39   QANDQNDKPS----VQQSRRPNLSSLQIPERSLENALPSSTRIDIPSLGSPVSTRLGLPP 206
            Q ++Q +K      VQQSRRPNLSSLQIP RSLEN   +  RI+I S  SP ST+ GLPP
Sbjct: 23   QESNQKEKGEGTSLVQQSRRPNLSSLQIPVRSLENTSSAFARIEISSAPSPTSTKAGLPP 82

Query: 207  RPASAKFRTSSKNLLPQRTFKTQNLSQEGEKTVLLIPETPSS-GQEKKPFTXXXXXXXXX 383
            RP SAKF++S +NLLPQR+ + +NLS++GEKTVL+IP+TPSS G   KP T         
Sbjct: 83   RPPSAKFKSSMRNLLPQRSLRAKNLSEDGEKTVLIIPDTPSSDGPLDKP-TTSRSFSLNK 141

Query: 384  XXXXTAKRTSSLPVTPVADSGPEYVQNRGLDNHLDFPKTEVQKQITRSFSVPVNVKTRSL 563
                + K T SLP TP+A SG E +Q + LD   DF K EVQ  +TRS SVPVNVK RSL
Sbjct: 142  VLFPSVKATYSLPATPIASSGSESLQEKNLDGESDFSKVEVQHHMTRSLSVPVNVKARSL 201

Query: 564  RQMDSTRGLMRVISVTPRSMVHNCTSPNDAPATENVNEDAGEDIPEEEAVCRICFIXXXX 743
            R+MDST GL+RVIS TPR +  +  S +DAP TE V+ D GEDIPEEEAVCRICFI    
Sbjct: 202  RRMDSTGGLIRVISATPRPVAVDGASQDDAPVTEIVSGDDGEDIPEEEAVCRICFIELGE 261

Query: 744  XXXXXXXXCSCKGELALAHQDCAVKWFSIKGNKTCDICKQDVKNLPVTLLRIXXXXXXXX 923
                    CSCKGELALAHQDCAVKWFSIKGNKTCD+CKQDV+NLPVTLL+I        
Sbjct: 262  GGDTLKLECSCKGELALAHQDCAVKWFSIKGNKTCDVCKQDVQNLPVTLLKIQNPQTVVR 321

Query: 924  XXXXVPQQREVARYRVWQDVPVLVMVSMLAYFCFLEQLLVSDLRSRALAVSLPFSCVLGL 1103
                +PQQRE  RYRVWQDVPVLVMVSMLAYFCFLEQLLV++L  RALA+SLPFSCVLGL
Sbjct: 322  RPATLPQQREETRYRVWQDVPVLVMVSMLAYFCFLEQLLVTNLGPRALAISLPFSCVLGL 381

Query: 1104 LSSMIASTMVSKGYIWAYASFQFAIVILFAHIFYAVLNVNAILSVLLSSFTGFGIAISTN 1283
            LSSMIASTMVSK YIWAYASFQFAIVILFAHIFY +LNVN ILSVLLSSFTGFGIAISTN
Sbjct: 382  LSSMIASTMVSKSYIWAYASFQFAIVILFAHIFYTILNVNPILSVLLSSFTGFGIAISTN 441

Query: 1284 SLLVEYLRWRSNRNLIST 1337
            SLLVEYLRWR++R + S+
Sbjct: 442  SLLVEYLRWRASRQVRSS 459


>emb|CBI22058.3| unnamed protein product [Vitis vinifera]
          Length = 521

 Score =  540 bits (1391), Expect = e-151
 Identities = 291/438 (66%), Positives = 331/438 (75%), Gaps = 5/438 (1%)
 Frame = +3

Query: 39   QANDQNDKPS----VQQSRRPNLSSLQIPERSLENALPSSTRIDIPSLGSPVSTRLGLPP 206
            Q ++Q +K      VQQSRRPNLSSLQIP RSLEN   +  RI+I S  SP ST+ GLPP
Sbjct: 23   QESNQKEKGEGTSLVQQSRRPNLSSLQIPVRSLENTSSAFARIEISSAPSPTSTKAGLPP 82

Query: 207  RPASAKFRTSSKNLLPQRTFKTQNLSQEGEKTVLLIPETPSS-GQEKKPFTXXXXXXXXX 383
            RP SAKF++S +NLLPQR+ + +NLS++GEKTVL+IP+TPSS G   KP T         
Sbjct: 83   RPPSAKFKSSMRNLLPQRSLRAKNLSEDGEKTVLIIPDTPSSDGPLDKP-TTSRSFSLNK 141

Query: 384  XXXXTAKRTSSLPVTPVADSGPEYVQNRGLDNHLDFPKTEVQKQITRSFSVPVNVKTRSL 563
                + K T SLP TP+A SG E +Q + LD   DF K EVQ  +TRS SVPVNVK RSL
Sbjct: 142  VLFPSVKATYSLPATPIASSGSESLQEKNLDGESDFSKVEVQHHMTRSLSVPVNVKARSL 201

Query: 564  RQMDSTRGLMRVISVTPRSMVHNCTSPNDAPATENVNEDAGEDIPEEEAVCRICFIXXXX 743
            R+MDST GL+RVIS TPR +  +  S +DAP TE V+ D GEDIPEEEAVCRICFI    
Sbjct: 202  RRMDSTGGLIRVISATPRPVAVDGASQDDAPVTEIVSGDDGEDIPEEEAVCRICFIELGE 261

Query: 744  XXXXXXXXCSCKGELALAHQDCAVKWFSIKGNKTCDICKQDVKNLPVTLLRIXXXXXXXX 923
                    CSCKGELALAHQDCAVKWFSIKGNKTCD+CKQDV+NLPVTLL+I        
Sbjct: 262  GGDTLKLECSCKGELALAHQDCAVKWFSIKGNKTCDVCKQDVQNLPVTLLKI-QNPQTVN 320

Query: 924  XXXXVPQQREVARYRVWQDVPVLVMVSMLAYFCFLEQLLVSDLRSRALAVSLPFSCVLGL 1103
                + Q+RE    RVWQDVPVLVMVSMLAYFCFLEQLLV++L  RALA+SLPFSCVLGL
Sbjct: 321  LNNVLDQKRENLLRRVWQDVPVLVMVSMLAYFCFLEQLLVTNLGPRALAISLPFSCVLGL 380

Query: 1104 LSSMIASTMVSKGYIWAYASFQFAIVILFAHIFYAVLNVNAILSVLLSSFTGFGIAISTN 1283
            LSSMIASTMVSK YIWAYASFQFAIVILFAHIFY +LNVN ILSVLLSSFTGFGIAISTN
Sbjct: 381  LSSMIASTMVSKSYIWAYASFQFAIVILFAHIFYTILNVNPILSVLLSSFTGFGIAISTN 440

Query: 1284 SLLVEYLRWRSNRNLIST 1337
            SLLVEYLRWR++R + S+
Sbjct: 441  SLLVEYLRWRASRQVRSS 458


>ref|XP_002323191.1| predicted protein [Populus trichocarpa] gi|222867821|gb|EEF04952.1|
            predicted protein [Populus trichocarpa]
          Length = 492

 Score =  503 bits (1296), Expect = e-140
 Identities = 272/418 (65%), Positives = 312/418 (74%), Gaps = 1/418 (0%)
 Frame = +3

Query: 78   SRRPNLSSLQIPERSLENALPSSTRIDIPSLGSPVSTRLGLPPRPASAKFRTSSKNLLPQ 257
            SR+P+LSSL+IP RSLE      T+I+I    SP S + GLPPRP+SAKF+++ K+LLPQ
Sbjct: 25   SRKPSLSSLEIPARSLETEF---TKIEIAQ--SPSSAKPGLPPRPSSAKFKSTVKSLLPQ 79

Query: 258  RTFKTQNLSQEGEKTVLLIPETP-SSGQEKKPFTXXXXXXXXXXXXXTAKRTSSLPVTPV 434
            R+ K +NL Q+GEKTVL++P+TP S     KP T               K T+SLPVTP 
Sbjct: 80   RSLKAKNLIQDGEKTVLIVPDTPPSDSPAAKPSTSRSFSLNKVLFPL--KSTNSLPVTPS 137

Query: 435  ADSGPEYVQNRGLDNHLDFPKTEVQKQITRSFSVPVNVKTRSLRQMDSTRGLMRVISVTP 614
            A+S PE +Q R +++  D+ K EVQ  I RS SVPVN+K RSLR+ DS  GL RV+S TP
Sbjct: 138  ANSDPEALQERNVNSCSDYDKVEVQHHIRRSLSVPVNIKVRSLRRTDSGGGLFRVVSATP 197

Query: 615  RSMVHNCTSPNDAPATENVNEDAGEDIPEEEAVCRICFIXXXXXXXXXXXXCSCKGELAL 794
            R +  + TS NDA  TE   ED GEDIPE+EAVCRIC +            CSCKGELAL
Sbjct: 198  RPVTADSTSTNDASTTEIAIEDDGEDIPEDEAVCRICLVELSEGGDAFKMECSCKGELAL 257

Query: 795  AHQDCAVKWFSIKGNKTCDICKQDVKNLPVTLLRIXXXXXXXXXXXXVPQQREVARYRVW 974
            AHQ CAVKWFSIKGNKTCD+CKQDV+NLPVTLL+I             PQQREVARYR  
Sbjct: 258  AHQQCAVKWFSIKGNKTCDVCKQDVQNLPVTLLKIHNPQATGRRPLPAPQQREVARYR-- 315

Query: 975  QDVPVLVMVSMLAYFCFLEQLLVSDLRSRALAVSLPFSCVLGLLSSMIASTMVSKGYIWA 1154
            QDVPVLVMVSMLAYFCFLEQLLVSDL  RALA+SLPFSCVLGLLSSMIA+TMV++ YIWA
Sbjct: 316  QDVPVLVMVSMLAYFCFLEQLLVSDLGPRALAISLPFSCVLGLLSSMIATTMVNRSYIWA 375

Query: 1155 YASFQFAIVILFAHIFYAVLNVNAILSVLLSSFTGFGIAISTNSLLVEYLRWRSNRNL 1328
            YASFQFA+VILFAHIFY VLNVN ILSVLLSSFTGFGIAISTNSLLVEYLRWRS+R L
Sbjct: 376  YASFQFAVVILFAHIFYTVLNVNPILSVLLSSFTGFGIAISTNSLLVEYLRWRSSRLL 433


>ref|XP_002522590.1| protein binding protein, putative [Ricinus communis]
            gi|223538181|gb|EEF39791.1| protein binding protein,
            putative [Ricinus communis]
          Length = 522

 Score =  490 bits (1261), Expect = e-136
 Identities = 256/421 (60%), Positives = 309/421 (73%), Gaps = 1/421 (0%)
 Frame = +3

Query: 69   VQQSRRPNLSSLQIPERSLENALPSSTRIDIPSLGSPVSTRLGLPPRPASAKFRTSSKNL 248
            VQQSRRPNLSSLQIP RS E++    TRIDI S  SP S++ GLPPRP SAKF++S +NL
Sbjct: 46   VQQSRRPNLSSLQIPARSAESSSHDFTRIDIGSSQSPSSSKAGLPPRPNSAKFKSSMRNL 105

Query: 249  LPQRTFKTQNLSQEGEKTVLLIPETPSSGQE-KKPFTXXXXXXXXXXXXXTAKRTSSLPV 425
            L QR+F+ +NL  + E T+L++P TPSS     KP T             + K T+SLPV
Sbjct: 106  LSQRSFRAKNLPHDDENTILIVPYTPSSDVPVDKPSTSRSFSLNKAFLTISTKATNSLPV 165

Query: 426  TPVADSGPEYVQNRGLDNHLDFPKTEVQKQITRSFSVPVNVKTRSLRQMDSTRGLMRVIS 605
            TP+   G + +Q R  ++  D  K EV+  I RS SVP+NVK RSLR+ +S+ GL R+IS
Sbjct: 166  TPIGKLGLQTLQERDPNHCPDDSKIEVKHHIRRSLSVPLNVKLRSLRRTESSGGLFRIIS 225

Query: 606  VTPRSMVHNCTSPNDAPATENVNEDAGEDIPEEEAVCRICFIXXXXXXXXXXXXCSCKGE 785
             +PR +  +    N+   TE  +E  GEDIPEEEAVCRIC +            CSCKGE
Sbjct: 226  ASPRPVAVDKVLANNDSKTEIASEGDGEDIPEEEAVCRICLVELAEGGDTLKLECSCKGE 285

Query: 786  LALAHQDCAVKWFSIKGNKTCDICKQDVKNLPVTLLRIXXXXXXXXXXXXVPQQREVARY 965
            LALAHQ+C VKWFSIKGN+TCD+C+Q+V+NLPVTLL+I            V QQ+EV  Y
Sbjct: 286  LALAHQECVVKWFSIKGNQTCDVCRQEVRNLPVTLLKIQNPQTIVRHPQPVAQQQEVTGY 345

Query: 966  RVWQDVPVLVMVSMLAYFCFLEQLLVSDLRSRALAVSLPFSCVLGLLSSMIASTMVSKGY 1145
            R+WQDVPVLVM+SMLAYFCFLEQLLVS+L  RALA+SLPFSCVLGLLSSMIASTMVS+ Y
Sbjct: 346  RLWQDVPVLVMISMLAYFCFLEQLLVSELGPRALAISLPFSCVLGLLSSMIASTMVSRSY 405

Query: 1146 IWAYASFQFAIVILFAHIFYAVLNVNAILSVLLSSFTGFGIAISTNSLLVEYLRWRSNRN 1325
            IWAY+SFQFA+VILFAHIFY+VL+VN +LSVLLSSFTGFGIAISTNSLLVEY RWR++R 
Sbjct: 406  IWAYSSFQFAVVILFAHIFYSVLSVNPVLSVLLSSFTGFGIAISTNSLLVEYFRWRTSRQ 465

Query: 1326 L 1328
            L
Sbjct: 466  L 466


>ref|XP_003563408.1| PREDICTED: uncharacterized protein LOC100839069 [Brachypodium
            distachyon]
          Length = 483

 Score =  468 bits (1203), Expect = e-129
 Identities = 256/427 (59%), Positives = 299/427 (70%), Gaps = 1/427 (0%)
 Frame = +3

Query: 45   NDQNDKPSVQQSRRPNLSSLQIPERSLENALPSSTRIDIPSLGSPVSTRLGLPPRPASAK 224
            +D     +   SRRPNLS LQIP R+LEN +P+STRI+I    SP S R GLPPRP SA+
Sbjct: 20   DDNAQSAAGHNSRRPNLS-LQIPVRTLENHIPTSTRINISP--SPSSMRTGLPPRPNSAR 76

Query: 225  FRTSSKNLLPQRTFKTQNLSQEGEKTVLLIPETPSSGQEKKPFTXXXXXXXXXXXXXTAK 404
             ++S KN+ PQR+F+ ++ +QEG++T LL+P T S G +  P               +AK
Sbjct: 77   PKSSIKNITPQRSFRLRSSTQEGDRTNLLVPGTASEGSQDNPTAPSSFSFRKVINSLSAK 136

Query: 405  RTSSLPVTPVADSGPEYVQNRGLDNHLDFPKTEVQKQITRSFSVPVNVKTRSLRQMDSTR 584
            RT SLPVTPVA S         +DN       EVQ QI RS SVP N K RSLR+ DS  
Sbjct: 137  RTYSLPVTPVATSEKASSPGIQIDNKPTTSNEEVQTQIRRSLSVPGNRKNRSLRRADSL- 195

Query: 585  GLMRVISVTPRSMVHNCTSPNDA-PATENVNEDAGEDIPEEEAVCRICFIXXXXXXXXXX 761
            G++RVI  TPR +  + T+ +D    T     D GEDIPEEEAVCRIC I          
Sbjct: 196  GVIRVIPTTPRPVPADMTALHDGVEETVEAPGDGGEDIPEEEAVCRICLIELNEGGETLK 255

Query: 762  XXCSCKGELALAHQDCAVKWFSIKGNKTCDICKQDVKNLPVTLLRIXXXXXXXXXXXXVP 941
              CSCKGELALAHQDCAVKWFSIKGNK CD+C+Q+V+NLPVTLLRI              
Sbjct: 256  MECSCKGELALAHQDCAVKWFSIKGNKICDVCRQEVQNLPVTLLRIPTQTVNRRLVNGGA 315

Query: 942  QQREVARYRVWQDVPVLVMVSMLAYFCFLEQLLVSDLRSRALAVSLPFSCVLGLLSSMIA 1121
            QQR   +YR WQD+P+LVMVSMLAYFCFLEQLLV+D+R+ ALA+SLPFSCVLGLLSSMIA
Sbjct: 316  QQRVAQQYRFWQDIPILVMVSMLAYFCFLEQLLVTDMRAHALAISLPFSCVLGLLSSMIA 375

Query: 1122 STMVSKGYIWAYASFQFAIVILFAHIFYAVLNVNAILSVLLSSFTGFGIAISTNSLLVEY 1301
            STMV+K Y+WAYASFQFAIVILFAHIFY VL VN +L+VLLSSFTGFGIAISTNSLLVEY
Sbjct: 376  STMVTKSYLWAYASFQFAIVILFAHIFYNVLRVNPVLAVLLSSFTGFGIAISTNSLLVEY 435

Query: 1302 LRWRSNR 1322
            LRWRS R
Sbjct: 436  LRWRSRR 442


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