BLASTX nr result

ID: Coptis23_contig00011711 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00011711
         (491 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002463283.1| hypothetical protein SORBIDRAFT_02g041160 [S...    61   4e-13
ref|XP_003537633.1| PREDICTED: transformation/transcription doma...    63   4e-13
ref|XP_003517177.1| PREDICTED: transformation/transcription doma...    63   1e-12
emb|CBI17379.3| unnamed protein product [Vitis vinifera]               65   2e-10
ref|XP_002521662.1| inositol or phosphatidylinositol kinase, put...    64   2e-08

>ref|XP_002463283.1| hypothetical protein SORBIDRAFT_02g041160 [Sorghum bicolor]
            gi|241926660|gb|EER99804.1| hypothetical protein
            SORBIDRAFT_02g041160 [Sorghum bicolor]
          Length = 3867

 Score = 61.2 bits (147), Expect(2) = 4e-13
 Identities = 27/38 (71%), Positives = 33/38 (86%)
 Frame = +2

Query: 281  GLALISSLVKLVPDWLQTNRVVFDTLVLVWKSPDRTAR 394
            GL L+S+LVKL+P+WL+ NRVVFDTL+L WKSP R AR
Sbjct: 1614 GLELVSALVKLMPEWLRNNRVVFDTLLLAWKSPARLAR 1651



 Score = 37.7 bits (86), Expect(2) = 4e-13
 Identities = 23/46 (50%), Positives = 29/46 (63%)
 Frame = +3

Query: 66   LREELARSPQKIVASAFPQCFRRIMDGSTLLGSPTLLASSVNDESL 203
            LR+ELARSPQKI+ASAF Q + +    +  L       SSV DE+L
Sbjct: 1550 LRDELARSPQKILASAFSQFYSQTEASAAQL-------SSVKDEAL 1588


>ref|XP_003537633.1| PREDICTED: transformation/transcription domain-associated
            protein-like [Glycine max]
          Length = 3866

 Score = 62.8 bits (151), Expect(2) = 4e-13
 Identities = 29/38 (76%), Positives = 33/38 (86%)
 Frame = +2

Query: 281  GLALISSLVKLVPDWLQTNRVVFDTLVLVWKSPDRTAR 394
            GLALI +LVKL+P WLQ+NR VFDTLVLVWKSP R +R
Sbjct: 1629 GLALIKTLVKLIPGWLQSNRSVFDTLVLVWKSPARISR 1666



 Score = 36.2 bits (82), Expect(2) = 4e-13
 Identities = 22/56 (39%), Positives = 34/56 (60%)
 Frame = +3

Query: 36   FL*EVNAGLSLREELARSPQKIVASAFPQCFRRIMDGSTLLGSPTLLASSVNDESL 203
            ++  + AG  LR+ELA+SPQKI+ASAF +    I    T+  + T   S + +ES+
Sbjct: 1551 YIIRLEAGQPLRDELAKSPQKILASAFSEF--PIKSDVTVAPASTSTPSLLGEESV 1604


>ref|XP_003517177.1| PREDICTED: transformation/transcription domain-associated
            protein-like [Glycine max]
          Length = 3865

 Score = 62.8 bits (151), Expect(2) = 1e-12
 Identities = 29/38 (76%), Positives = 33/38 (86%)
 Frame = +2

Query: 281  GLALISSLVKLVPDWLQTNRVVFDTLVLVWKSPDRTAR 394
            GLALI +LVKL+P WLQ+NR VFDTLVLVWKSP R +R
Sbjct: 1629 GLALIKTLVKLIPGWLQSNRSVFDTLVLVWKSPARISR 1666



 Score = 35.0 bits (79), Expect(2) = 1e-12
 Identities = 22/50 (44%), Positives = 31/50 (62%)
 Frame = +3

Query: 54   AGLSLREELARSPQKIVASAFPQCFRRIMDGSTLLGSPTLLASSVNDESL 203
            AG  LR+ELA+SPQKI+ASAF + F    D +    S +   S + +ES+
Sbjct: 1557 AGQPLRDELAKSPQKILASAFSE-FPLKSDVTVAPASTSTHTSLLGEESV 1605


>emb|CBI17379.3| unnamed protein product [Vitis vinifera]
          Length = 3681

 Score = 64.7 bits (156), Expect(2) = 2e-10
 Identities = 30/38 (78%), Positives = 34/38 (89%)
 Frame = +2

Query: 281  GLALISSLVKLVPDWLQTNRVVFDTLVLVWKSPDRTAR 394
            GLALIS++VKL+P WLQ+NRVVFDTLVLVWKSP R  R
Sbjct: 1498 GLALISTMVKLMPGWLQSNRVVFDTLVLVWKSPARITR 1535



 Score = 25.4 bits (54), Expect(2) = 2e-10
 Identities = 12/22 (54%), Positives = 17/22 (77%)
 Frame = +3

Query: 390  LDRLHNEQKLSLVQGRVQQLVW 455
            + RLHNEQ+L+LVQ  V++  W
Sbjct: 1533 ITRLHNEQELNLVQ--VKESKW 1552


>ref|XP_002521662.1| inositol or phosphatidylinositol kinase, putative [Ricinus communis]
            gi|223539053|gb|EEF40649.1| inositol or
            phosphatidylinositol kinase, putative [Ricinus communis]
          Length = 3772

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 30/42 (71%), Positives = 35/42 (83%)
 Frame = +2

Query: 281  GLALISSLVKLVPDWLQTNRVVFDTLVLVWKSPDRTARSFTQ 406
            GLALI +LVKL+P WL +NR VFDTLVLVWKSP RT+R  T+
Sbjct: 1517 GLALIKTLVKLIPGWLHSNRNVFDTLVLVWKSPARTSRLQTE 1558


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