BLASTX nr result

ID: Coptis23_contig00011704 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00011704
         (3893 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264970.2| PREDICTED: DNA topoisomerase 3-beta-1-like [...   876   0.0  
ref|XP_002321105.1| predicted protein [Populus trichocarpa] gi|2...   859   0.0  
ref|XP_002516387.1| prokaryotic DNA topoisomerase, putative [Ric...   851   0.0  
ref|XP_003538536.1| PREDICTED: DNA topoisomerase 3-beta-1-like [...   834   0.0  
ref|XP_003601731.1| DNA topoisomerase [Medicago truncatula] gi|3...   821   0.0  

>ref|XP_002264970.2| PREDICTED: DNA topoisomerase 3-beta-1-like [Vitis vinifera]
          Length = 894

 Score =  876 bits (2264), Expect(2) = 0.0
 Identities = 417/510 (81%), Positives = 450/510 (88%), Gaps = 5/510 (0%)
 Frame = +1

Query: 2194 WGDYVRALLATGFLPPRVGTDAGDHPPITPMRSATEDMLGNDAWRLYQYICQHFIGTVSP 2373
            WGDYV+ LL  GF  PR GTDAGDHPPITPMR+A EDMLGNDAW+LYQY+CQHFIGTVSP
Sbjct: 385  WGDYVQKLLDDGFHRPRSGTDAGDHPPITPMRAANEDMLGNDAWKLYQYVCQHFIGTVSP 444

Query: 2374 DCKYLRTKVEFSTGGEVFYYTGQRVISKGFTCIMPWLAVDEKNLPQFAKGEKMKISKVEL 2553
            DCKY+R KVEFS GGE+F   GQ VI KGFT IMPWLAV+EKNLPQF KGEK+++SKVEL
Sbjct: 445  DCKYVRNKVEFSIGGEIFRCIGQHVIVKGFTSIMPWLAVNEKNLPQFKKGEKIEVSKVEL 504

Query: 2554 YEGNTSPPDYLSESELISLMEKNGIGTDASIPVHINNICERNFVQVHAGRRLVPTTLGIT 2733
            YEG TSPPDYLSESELISLMEKNGIGTDASIPVHINNICERNFVQV AGR+LVPT LGI+
Sbjct: 505  YEGETSPPDYLSESELISLMEKNGIGTDASIPVHINNICERNFVQVQAGRKLVPTALGIS 564

Query: 2734 LIRGYQTIDPDLCLPDIRSFIEQQITLIAKGQANHSCVVEHVLQQFRQKYSYFVKQIENM 2913
            LIRGYQ IDPDLCLPDIRSFIEQQITL+AKGQ +HS VVEHVLQQF+QK+ YFVKQIENM
Sbjct: 565  LIRGYQCIDPDLCLPDIRSFIEQQITLVAKGQVDHSRVVEHVLQQFKQKFIYFVKQIENM 624

Query: 2914 DALFEAQFSPLADSGRLLSKCGKCTRYMKYISVQPSRLYCGTCEEVYNLPQKGTIKLYKE 3093
            DALFEAQFSPLADSGR LSKCGKC RYMKYIS QPSR+YCGTCEEVY LPQKGTIKLYKE
Sbjct: 625  DALFEAQFSPLADSGRALSKCGKCLRYMKYISTQPSRMYCGTCEEVYYLPQKGTIKLYKE 684

Query: 3094 LVCPLDNFELLIFSMAGPEGKSFPLCPYCYNNPPFEGIDTLFSNSKTSSS---GKGAGMP 3264
            L CPLDNFELLIFS+AGPEGKSFPLCPYCYN+PPFEGIDTLF  +KTSS+   GKGAGMP
Sbjct: 685  LTCPLDNFELLIFSLAGPEGKSFPLCPYCYNSPPFEGIDTLFGATKTSSTGKLGKGAGMP 744

Query: 3265 CFMCPHPTCQHSVIAQGVCACPECDGTLVLDPVSGPKWRLYCNMCNCLVFLPQGAHRIST 3444
            CF+CPHPTC HS+IAQGVCACPEC GTLVLDPVS PKWRLYCNMCNCLV+LPQGAH+IST
Sbjct: 745  CFLCPHPTCPHSLIAQGVCACPECSGTLVLDPVSAPKWRLYCNMCNCLVYLPQGAHKIST 804

Query: 3445 TRDRCVECDSTILEVDFNKKTTPLSDGATLHSGCILCDDLLHSLVEMKHGKSFYKR--TX 3618
            TRDRC EC+STILEVDFNKKTTPL DG+TL++GCILCD+LLHSLVEMKHGKSF+KR  + 
Sbjct: 805  TRDRCPECESTILEVDFNKKTTPLLDGSTLYTGCILCDELLHSLVEMKHGKSFFKRMGSR 864

Query: 3619 XXXXXXXXXXXXXXXXXXKREDPKMSFRDF 3708
                              K +DPKMSFRDF
Sbjct: 865  GRGRGSGRGGFRGRGRGGKWDDPKMSFRDF 894



 Score =  324 bits (830), Expect(2) = 0.0
 Identities = 157/187 (83%), Positives = 172/187 (91%)
 Frame = +3

Query: 1572 AWFSSVTEKDILKALGTLVEPNKDEALAVEARQEIDLKVGVAFTRFQTSYFQGKYGNLDS 1751
            A FSSVTEKDILKA+  LVEPN+DEA AV+ARQEIDLKVGVAFTRFQTSYFQGKYGNLDS
Sbjct: 173  ARFSSVTEKDILKAMDNLVEPNEDEARAVDARQEIDLKVGVAFTRFQTSYFQGKYGNLDS 232

Query: 1752 KVISYGPCQTPTLGFCVQRYLQITAFKPEKFWSLHPYLMKPGYELRLEWDRNKLFEFKIA 1931
            +VISYGPCQTPTLGFCVQRYLQI  FKPEKFW+LHPY+   GYEL+LEW+RNKLF+  +A
Sbjct: 233  RVISYGPCQTPTLGFCVQRYLQINTFKPEKFWALHPYITHNGYELQLEWERNKLFDLDVA 292

Query: 1932 AMFQKLVVEDGIVEVSDISVKEESKKRPSGLNTVNLLKIASSALGFGPQLAMQLAERLYT 2111
             MFQ LV+EDGIVEV+DIS K+ESK RPSGLNTVNLLK+ASSALGFGPQ+AMQLAERLYT
Sbjct: 293  VMFQNLVMEDGIVEVTDISEKQESKSRPSGLNTVNLLKVASSALGFGPQMAMQLAERLYT 352

Query: 2112 QGFISYP 2132
            QGFISYP
Sbjct: 353  QGFISYP 359


>ref|XP_002321105.1| predicted protein [Populus trichocarpa] gi|222861878|gb|EEE99420.1|
            predicted protein [Populus trichocarpa]
          Length = 837

 Score =  859 bits (2219), Expect(2) = 0.0
 Identities = 404/508 (79%), Positives = 440/508 (86%), Gaps = 3/508 (0%)
 Frame = +1

Query: 2194 WGDYVRALLATGFLPPRVGTDAGDHPPITPMRSATEDMLGNDAWRLYQYICQHFIGTVSP 2373
            WGDYV+ LL+ G+  P+ G DAGDHPPITPMRSA EDMLG DAWRLYQY+CQHF+GTVSP
Sbjct: 330  WGDYVQGLLSGGYHKPQSGKDAGDHPPITPMRSANEDMLGRDAWRLYQYVCQHFLGTVSP 389

Query: 2374 DCKYLRTKVEFSTGGEVFYYTGQRVISKGFTCIMPWLAVDEKNLPQFAKGEKMKISKVEL 2553
            DCKY RTKVEFS GGE F+  G  V  KGFT IMPWLAV EKNLPQFAKG+K+++SKVEL
Sbjct: 390  DCKYTRTKVEFSIGGEFFHCIGLHVTVKGFTSIMPWLAVSEKNLPQFAKGDKIEVSKVEL 449

Query: 2554 YEGNTSPPDYLSESELISLMEKNGIGTDASIPVHINNICERNFVQVHAGRRLVPTTLGIT 2733
            +EG T PPDYLSESELISLMEKNGIGTDASI VHINNICERN+VQV AGR+LVPT LGIT
Sbjct: 450  FEGQTVPPDYLSESELISLMEKNGIGTDASISVHINNICERNYVQVQAGRKLVPTALGIT 509

Query: 2734 LIRGYQTIDPDLCLPDIRSFIEQQITLIAKGQANHSCVVEHVLQQFRQKYSYFVKQIENM 2913
            LIRGYQ IDPDLCLPDIR FIEQQITL+AKG+A+HSCVV+HVL+QF++KYSYFVKQI+NM
Sbjct: 510  LIRGYQCIDPDLCLPDIRGFIEQQITLVAKGEADHSCVVQHVLEQFKRKYSYFVKQIDNM 569

Query: 2914 DALFEAQFSPLADSGRLLSKCGKCTRYMKYISVQPSRLYCGTCEEVYNLPQKGTIKLYKE 3093
            DALFEAQFSPLADSGR  SKCGKC RYMKYIS QPSRLYCGTCEEVY LPQKGTIKLYKE
Sbjct: 570  DALFEAQFSPLADSGRAFSKCGKCLRYMKYISSQPSRLYCGTCEEVYYLPQKGTIKLYKE 629

Query: 3094 LVCPLDNFELLIFSMAGPEGKSFPLCPYCYNNPPFEGIDTLFSNSKTSSS---GKGAGMP 3264
            L CPLDNFELLIF+MAGPEGKSFPLCP CYN+PPFEGID LF  SKT SS   GKGAGMP
Sbjct: 630  LTCPLDNFELLIFAMAGPEGKSFPLCPLCYNSPPFEGIDALFGASKTGSSGMLGKGAGMP 689

Query: 3265 CFMCPHPTCQHSVIAQGVCACPECDGTLVLDPVSGPKWRLYCNMCNCLVFLPQGAHRIST 3444
            CF+CPHPTC+HS+IAQGVCACPEC+GTLVLDP+S PKWRLYCNMCNCLV LPQGAHRIST
Sbjct: 690  CFLCPHPTCRHSLIAQGVCACPECNGTLVLDPISAPKWRLYCNMCNCLVLLPQGAHRIST 749

Query: 3445 TRDRCVECDSTILEVDFNKKTTPLSDGATLHSGCILCDDLLHSLVEMKHGKSFYKRTXXX 3624
            TR++C ECDSTI+EVDFNK TTPL DGATLH GCILCD+LLHSLVE+KHGKSF+KR    
Sbjct: 750  TREQCPECDSTIIEVDFNKNTTPLEDGATLHVGCILCDNLLHSLVEVKHGKSFFKRAGKW 809

Query: 3625 XXXXXXXXXXXXXXXXKREDPKMSFRDF 3708
                             + DPKMSFRDF
Sbjct: 810  ARARGRGAYRGRGRGLGKMDPKMSFRDF 837



 Score =  306 bits (785), Expect(2) = 0.0
 Identities = 150/187 (80%), Positives = 170/187 (90%)
 Frame = +3

Query: 1572 AWFSSVTEKDILKALGTLVEPNKDEALAVEARQEIDLKVGVAFTRFQTSYFQGKYGNLDS 1751
            A FSSVTEKDILKA+  LVEPN+ EALAV+ARQEIDLKVGVAFTRFQTS+FQGKYGNLDS
Sbjct: 118  ARFSSVTEKDILKAMNCLVEPNEYEALAVDARQEIDLKVGVAFTRFQTSFFQGKYGNLDS 177

Query: 1752 KVISYGPCQTPTLGFCVQRYLQITAFKPEKFWSLHPYLMKPGYELRLEWDRNKLFEFKIA 1931
            +VISYGPCQTPTLGFCVQRYLQIT FKPEKFW+L P++M  GYEL+LEW+R+KLF+  +A
Sbjct: 178  RVISYGPCQTPTLGFCVQRYLQITTFKPEKFWALRPHVMVDGYELQLEWERHKLFDLDVA 237

Query: 1932 AMFQKLVVEDGIVEVSDISVKEESKKRPSGLNTVNLLKIASSALGFGPQLAMQLAERLYT 2111
             MFQKLV++D I+EV+D+S K+ESK RP GLNTVNLLKIASSALGFGPQ+ MQLAERLY 
Sbjct: 238  LMFQKLVLQDRILEVTDMSEKQESKGRPPGLNTVNLLKIASSALGFGPQVTMQLAERLYI 297

Query: 2112 QGFISYP 2132
            QGFISYP
Sbjct: 298  QGFISYP 304


>ref|XP_002516387.1| prokaryotic DNA topoisomerase, putative [Ricinus communis]
            gi|223544485|gb|EEF46004.1| prokaryotic DNA
            topoisomerase, putative [Ricinus communis]
          Length = 865

 Score =  851 bits (2199), Expect(2) = 0.0
 Identities = 403/509 (79%), Positives = 438/509 (86%), Gaps = 4/509 (0%)
 Frame = +1

Query: 2194 WGDYVRALLATGFLPPRVGTDAGDHPPITPMRSATEDMLGNDAWRLYQYICQHFIGTVSP 2373
            WGD VR LL  G+  PR+GTDAGDHPPITP+R ATEDMLG DAWRLYQY+CQHFIG+VSP
Sbjct: 357  WGDSVRRLLVEGYHKPRLGTDAGDHPPITPIRLATEDMLGKDAWRLYQYVCQHFIGSVSP 416

Query: 2374 DCKYLRTKVEFSTGGEVFYYTGQRVISKGFTCIMPWLAVDEKNLPQFAKGEKMKISKVEL 2553
            DCKY+RTKVEFS GGE F+  GQ VI +GFT IMPWLAV EKNLPQ  KGEK+++ ++EL
Sbjct: 417  DCKYVRTKVEFSVGGEFFHCIGQHVIVEGFTSIMPWLAVTEKNLPQLVKGEKIEVLRMEL 476

Query: 2554 YEGNTSPPDYLSESELISLMEKNGIGTDASIPVHINNICERNFVQVHAGRRLVPTTLGIT 2733
             EG T+PPDYL+ESELISLMEKNGIGTDASIPVHINNICERN+VQV AGRRL PT LGIT
Sbjct: 477  LEGKTTPPDYLTESELISLMEKNGIGTDASIPVHINNICERNYVQVQAGRRLAPTILGIT 536

Query: 2734 LIRGYQTIDPDLCLPDIRSFIEQQITLIAKGQANHSCVVEHVLQQFRQKYSYFVKQIENM 2913
            LIRGYQ IDPDLCLPDIRSFIEQQITL+AKGQA+HS VV+HVLQQF+QK++YFVKQI+NM
Sbjct: 537  LIRGYQCIDPDLCLPDIRSFIEQQITLVAKGQADHSRVVQHVLQQFKQKFTYFVKQIDNM 596

Query: 2914 DALFEAQFSPLADSGRLLSKCGKCTRYMKYISVQPSRLYCGTCEEVYNLPQKGTIKLYKE 3093
            DALFEAQFS L DSGR LSKCGKC RYMKYIS QP RLYCGTCEEVY LPQKGTIKLYKE
Sbjct: 597  DALFEAQFSQLVDSGRALSKCGKCLRYMKYISTQPPRLYCGTCEEVYYLPQKGTIKLYKE 656

Query: 3094 LVCPLDNFELLIFSMAGPEGKSFPLCPYCYNNPPFEGIDTLFSNSKTSS---SGKGAGMP 3264
            L CPLDNFELLIFSMAGPEGK+FPLCPYCYNNPPFEG+DTLF  SK  +    GKGAGMP
Sbjct: 657  LTCPLDNFELLIFSMAGPEGKTFPLCPYCYNNPPFEGVDTLFGASKNGNFGKLGKGAGMP 716

Query: 3265 CFMCPHPTCQHSVIAQGVCACPECDGTLVLDPVSGPKWRLYCNMCNCLVFLPQGAHRIST 3444
            CF+CPHPTC+HS+IAQGVCACPEC GTLVLDPVS PKWRLYCNMCNCLV LPQGAHRI+T
Sbjct: 717  CFLCPHPTCRHSLIAQGVCACPECSGTLVLDPVSAPKWRLYCNMCNCLVLLPQGAHRIAT 776

Query: 3445 TRDRCVECDSTILEVDFNKKTTPLSDGATLHSGCILCDDLLHSLVEMKHGKSFYKRT-XX 3621
            TR+RC ECDSTI+EVDFNK TTPL DGATLH GCILCDDLLHSLVE+KHGKSF+KR    
Sbjct: 777  TRERCPECDSTIIEVDFNKNTTPLEDGATLHIGCILCDDLLHSLVEVKHGKSFFKRLGAG 836

Query: 3622 XXXXXXXXXXXXXXXXXKREDPKMSFRDF 3708
                             +R DPKMSFRDF
Sbjct: 837  RRGRGAGRGRGRGRSSGRRGDPKMSFRDF 865



 Score =  309 bits (791), Expect(2) = 0.0
 Identities = 149/187 (79%), Positives = 171/187 (91%)
 Frame = +3

Query: 1572 AWFSSVTEKDILKALGTLVEPNKDEALAVEARQEIDLKVGVAFTRFQTSYFQGKYGNLDS 1751
            A FSSV EKDILKA+  LV+PN+DEALAV+ARQEIDLKVGVAFTRFQTS+FQGKYGNLDS
Sbjct: 145  ARFSSVAEKDILKAMDNLVQPNRDEALAVDARQEIDLKVGVAFTRFQTSFFQGKYGNLDS 204

Query: 1752 KVISYGPCQTPTLGFCVQRYLQITAFKPEKFWSLHPYLMKPGYELRLEWDRNKLFEFKIA 1931
            +VISYGPCQTPTLGFCVQRYLQI  FKPEKFWSL P+L+  GY+L+LEW+R++LF+  +A
Sbjct: 205  RVISYGPCQTPTLGFCVQRYLQIATFKPEKFWSLRPHLIIDGYQLQLEWERHRLFDLDVA 264

Query: 1932 AMFQKLVVEDGIVEVSDISVKEESKKRPSGLNTVNLLKIASSALGFGPQLAMQLAERLYT 2111
             MFQK V++DGI+EV DIS K+E+K RPSGLNTVNLLK+ASSALGFGPQ+AMQLAERLYT
Sbjct: 265  LMFQKQVLQDGILEVIDISQKQETKGRPSGLNTVNLLKVASSALGFGPQMAMQLAERLYT 324

Query: 2112 QGFISYP 2132
            QGFISYP
Sbjct: 325  QGFISYP 331


>ref|XP_003538536.1| PREDICTED: DNA topoisomerase 3-beta-1-like [Glycine max]
          Length = 863

 Score =  834 bits (2155), Expect(2) = 0.0
 Identities = 390/509 (76%), Positives = 441/509 (86%), Gaps = 4/509 (0%)
 Frame = +1

Query: 2194 WGDYVRALLATGFLPPRVGTDAGDHPPITPMRSATEDMLGNDAWRLYQYICQHFIGTVSP 2373
            WG+YV+ LL  G+  PR+GTD GDHPPITPMRSA EDMLGNDAW+LYQYICQHFIGTVSP
Sbjct: 355  WGNYVQGLLTNGYQKPRLGTDVGDHPPITPMRSAAEDMLGNDAWKLYQYICQHFIGTVSP 414

Query: 2374 DCKYLRTKVEFSTGGEVFYYTGQRVISKGFTCIMPWLAVDEKNLPQFAKGEKMKISKVEL 2553
            DCKY+R KVEFS GGE F+ TGQ V++KGFT IMPWLA+++KN+P F KG+K+++SK+EL
Sbjct: 415  DCKYIRRKVEFSIGGESFHCTGQHVVTKGFTAIMPWLAINDKNIPSFIKGQKIEVSKLEL 474

Query: 2554 YEGNTSPPDYLSESELISLMEKNGIGTDASIPVHINNICERNFVQVHAGRRLVPTTLGIT 2733
            YEG+TSPPD+L+ESELISLMEKNGIGTDASIPVHINNICERN+VQV AGR+LVPTTLGIT
Sbjct: 475  YEGSTSPPDFLTESELISLMEKNGIGTDASIPVHINNICERNYVQVQAGRKLVPTTLGIT 534

Query: 2734 LIRGYQTIDPDLCLPDIRSFIEQQITLIAKGQANHSCVVEHVLQQFRQKYSYFVKQIENM 2913
            L+RGYQTIDPDLCLPDIRSFIEQQITLIAKGQ +H  VV+HV+QQF QK+SYFVK+IE+M
Sbjct: 535  LVRGYQTIDPDLCLPDIRSFIEQQITLIAKGQVDHRHVVQHVIQQFTQKFSYFVKKIEDM 594

Query: 2914 DALFEAQFSPLADSGRLLSKCGKCTRYMKYISVQPSRLYCGTCEEVYNLPQKGTIKLYKE 3093
            DALFEAQFS L DSGR+LSKCGKC RYMK+IS QPSRLYCGTCEEVY LPQKGTIKLYKE
Sbjct: 595  DALFEAQFSTLTDSGRILSKCGKCLRYMKFISTQPSRLYCGTCEEVYYLPQKGTIKLYKE 654

Query: 3094 LVCPLDNFELLIFSMAGPEGKSFPLCPYCYNNPPFEGIDTLFSNSKTSSS---GKGAGMP 3264
            L CPLDNFELLI SM GP+GKSFPLCPYCY NPPFEGI+TL + +KT +S   GKGAGMP
Sbjct: 655  LSCPLDNFELLICSMPGPDGKSFPLCPYCYINPPFEGIETLINTAKTGTSGKIGKGAGMP 714

Query: 3265 CFMCPHPTCQHSVIAQGVCACPECDGTLVLDPVSGPKWRLYCNMCNCLVFLPQGAHRIST 3444
            C +CPHPTC +S+++QGVCACPEC GTLVLDPVS P+W+L CNMCNCLVFL QGAHRIST
Sbjct: 715  CNLCPHPTCPNSLVSQGVCACPECSGTLVLDPVSAPRWKLCCNMCNCLVFLAQGAHRIST 774

Query: 3445 TRDRCVECDSTILEVDFNKKTTPLSDGATLHSGCILCDDLLHSLVEMKHGKSF-YKRTXX 3621
            T+DRC ECDS+I+EVDFNKKTTPL DGATLH GCILCD+LLHSLVEMKHG+SF +  +  
Sbjct: 775  TKDRCPECDSSIIEVDFNKKTTPLEDGATLHHGCILCDELLHSLVEMKHGRSFRHMSSRG 834

Query: 3622 XXXXXXXXXXXXXXXXXKREDPKMSFRDF 3708
                             K  DPKMSFRDF
Sbjct: 835  RGRGARKGGRGRGRGGGKMMDPKMSFRDF 863



 Score =  317 bits (811), Expect(2) = 0.0
 Identities = 151/187 (80%), Positives = 171/187 (91%)
 Frame = +3

Query: 1572 AWFSSVTEKDILKALGTLVEPNKDEALAVEARQEIDLKVGVAFTRFQTSYFQGKYGNLDS 1751
            A FSSVTEKD++KAL  LV PN+DEALAV+ARQEIDLKVGVAFTRFQTSYFQGKYGNLDS
Sbjct: 143  ARFSSVTEKDVVKALDNLVRPNRDEALAVDARQEIDLKVGVAFTRFQTSYFQGKYGNLDS 202

Query: 1752 KVISYGPCQTPTLGFCVQRYLQITAFKPEKFWSLHPYLMKPGYELRLEWDRNKLFEFKIA 1931
            +VISYGPCQTPTLGFCVQRYLQI  FKPEKFWSLHPY+++ GYE++LEW R KLF+  +A
Sbjct: 203  RVISYGPCQTPTLGFCVQRYLQINTFKPEKFWSLHPYIIQNGYEIQLEWQRGKLFDINVA 262

Query: 1932 AMFQKLVVEDGIVEVSDISVKEESKKRPSGLNTVNLLKIASSALGFGPQLAMQLAERLYT 2111
             MFQKLV EDG++EV++IS K+E+K RP GLNTVNLLK+ASSALGFGPQ+AMQLAERLYT
Sbjct: 263  MMFQKLVSEDGLLEVTEISEKQETKSRPVGLNTVNLLKVASSALGFGPQMAMQLAERLYT 322

Query: 2112 QGFISYP 2132
            QGFISYP
Sbjct: 323  QGFISYP 329


>ref|XP_003601731.1| DNA topoisomerase [Medicago truncatula] gi|355490779|gb|AES71982.1|
            DNA topoisomerase [Medicago truncatula]
          Length = 1024

 Score =  821 bits (2120), Expect(2) = 0.0
 Identities = 387/519 (74%), Positives = 441/519 (84%), Gaps = 14/519 (2%)
 Frame = +1

Query: 2194 WGDYVRALLATGFLPPRVGTDAGDHPPITPMRSATEDMLGNDAWRLYQYICQHFIGTVSP 2373
            WG+YV  LLA+G+  PR GTD GDHPPITPM+SA+EDMLGNDAW+LYQYICQ+FIGTVSP
Sbjct: 506  WGNYVEGLLASGYQKPRSGTDVGDHPPITPMKSASEDMLGNDAWKLYQYICQYFIGTVSP 565

Query: 2374 DCKYLRTKVEFSTGGEVFYYTGQRVISKGFTCIMPWLAVDEKNLPQFAKGEKMKISKVEL 2553
            DCKY+R KVEF  GGE F+ TGQ VI+KGFT IMPWLA+++K+LP F +G+K+K+SKVEL
Sbjct: 566  DCKYIRKKVEFQVGGESFHCTGQHVITKGFTAIMPWLAINDKSLPSFEEGQKIKLSKVEL 625

Query: 2554 YEGNTSPPDYLSESELISLMEKNGIGTDASIPVHINNICERNFVQVHAGRRLVPTTLGIT 2733
            YEG+T+PPD+L+ESELISLMEKNGIGTDASIPVHINNICERN+VQV AGR+L PTTLGIT
Sbjct: 626  YEGSTTPPDFLTESELISLMEKNGIGTDASIPVHINNICERNYVQVQAGRKLSPTTLGIT 685

Query: 2734 LIRGYQTIDPDLCLPDIRSFIEQQITLIAKGQANHSCVVEHVLQQFRQKYSYFVKQ---- 2901
            L+RGYQ+IDPDLCLPDIRSFIEQQITLIAKGQ +H  VV+HV++QF+QK+ YFVK+    
Sbjct: 686  LVRGYQSIDPDLCLPDIRSFIEQQITLIAKGQVDHHRVVQHVIEQFKQKFCYFVKKVGYL 745

Query: 2902 -------IENMDALFEAQFSPLADSGRLLSKCGKCTRYMKYISVQPSRLYCGTCEEVYNL 3060
                   IE MDALFEAQFS L DSGR++SKCGKC RYMKYISVQPSRLYCGTCEEVY+L
Sbjct: 746  LFSACFWIEAMDALFEAQFSALVDSGRIMSKCGKCLRYMKYISVQPSRLYCGTCEEVYDL 805

Query: 3061 PQKGTIKLYKELVCPLDNFELLIFSMAGPEGKSFPLCPYCYNNPPFEGIDTLFSNSKTSS 3240
            PQKGTIKLYKEL CPLDNFELLI SM GPEGKSFPLCPYCY+NPPFEGIDTL +++KT++
Sbjct: 806  PQKGTIKLYKELTCPLDNFELLICSMPGPEGKSFPLCPYCYSNPPFEGIDTLINSAKTTT 865

Query: 3241 S---GKGAGMPCFMCPHPTCQHSVIAQGVCACPECDGTLVLDPVSGPKWRLYCNMCNCLV 3411
            S   GKGAGMPC +CPHPTC +S+++QGVCACPEC GTLVLDPVS PKWRL CNMCNCLV
Sbjct: 866  SSKTGKGAGMPCNLCPHPTCPNSLVSQGVCACPECSGTLVLDPVSAPKWRLCCNMCNCLV 925

Query: 3412 FLPQGAHRISTTRDRCVECDSTILEVDFNKKTTPLSDGATLHSGCILCDDLLHSLVEMKH 3591
            FL QGAHRISTT++RC ECDS+ILEVDFNKKTTPL+DG+TLH GCILCD LLHSLVEMK+
Sbjct: 926  FLAQGAHRISTTKERCPECDSSILEVDFNKKTTPLADGSTLHRGCILCDVLLHSLVEMKY 985

Query: 3592 GKSFYKRTXXXXXXXXXXXXXXXXXXXKREDPKMSFRDF 3708
            G+ F                       K  DPKMSFRDF
Sbjct: 986  GRGFKSSRGRGRGGRTQRYRGRGRGNAKMMDPKMSFRDF 1024



 Score =  293 bits (751), Expect(2) = 0.0
 Identities = 148/214 (69%), Positives = 168/214 (78%), Gaps = 27/214 (12%)
 Frame = +3

Query: 1572 AWFSSVTEKDILKALGTLVEPNKDEALAVEARQEIDLKVGVAFTRFQTSYFQGKYGNLDS 1751
            A FSSVTEKD+L AL  LV PN+DEA+AV+ARQEIDLKVGVAFTRFQTS+FQGKYGNLD+
Sbjct: 267  ARFSSVTEKDVLNALDNLVRPNRDEAMAVDARQEIDLKVGVAFTRFQTSFFQGKYGNLDA 326

Query: 1752 KVIS---------------------------YGPCQTPTLGFCVQRYLQITAFKPEKFWS 1850
            +VIS                           YGPCQTPTLGFCVQRYLQI  FKPEKFWS
Sbjct: 327  RVISLVFCSLLSSGGPLVINQLLDWICIANSYGPCQTPTLGFCVQRYLQINTFKPEKFWS 386

Query: 1851 LHPYLMKPGYELRLEWDRNKLFEFKIAAMFQKLVVEDGIVEVSDISVKEESKKRPSGLNT 2030
            L PY+++ GYE+ LEW R+KLF+  +A MFQKLV +DGIVEV++IS K E+K RP GLNT
Sbjct: 387  LQPYIIQSGYEILLEWQRSKLFDINVAMMFQKLVADDGIVEVTNISEKPETKGRPVGLNT 446

Query: 2031 VNLLKIASSALGFGPQLAMQLAERLYTQGFISYP 2132
            VNLLK+ASSALGFGPQ+AMQLAERLYTQGFISYP
Sbjct: 447  VNLLKVASSALGFGPQMAMQLAERLYTQGFISYP 480


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