BLASTX nr result
ID: Coptis23_contig00011703
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00011703
(1577 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002269671.1| PREDICTED: SWI/SNF-related matrix-associated... 793 0.0
ref|XP_002519341.1| Chromatin remodelling complex ATPase chain i... 790 0.0
ref|XP_003541328.1| PREDICTED: SWI/SNF-related matrix-associated... 768 0.0
ref|XP_003550580.1| PREDICTED: SWI/SNF-related matrix-associated... 754 0.0
ref|XP_002315473.1| chromatin remodeling complex subunit [Populu... 754 0.0
>ref|XP_002269671.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A-like protein 1 [Vitis
vinifera] gi|297736823|emb|CBI26024.3| unnamed protein
product [Vitis vinifera]
Length = 677
Score = 793 bits (2047), Expect = 0.0
Identities = 403/490 (82%), Positives = 444/490 (90%)
Frame = +1
Query: 1 RFVLQHGGRVLIADEMGLGKTLQAIAVTACIRDSWPVLVLTPSSLRLQWATMIQQWLNIP 180
RFVLQHGGRVL+ADEMGLGKTLQAIAVT C+RDSWPVLVLTPSSLRL WA+MIQQWLNIP
Sbjct: 194 RFVLQHGGRVLLADEMGLGKTLQAIAVTTCVRDSWPVLVLTPSSLRLHWASMIQQWLNIP 253
Query: 181 STDILVVLSQCSGSNRGGFTIVHSNAKSTIHLDGVFNIISYDSVPKLEQLLMASEFKIVI 360
S+DILVVLSQ SGSNRGGF IV SN K TIHLDGVFNIISYD V KL+++L SEFK+VI
Sbjct: 254 SSDILVVLSQWSGSNRGGFRIVPSNTKGTIHLDGVFNIISYDVVLKLQKILAESEFKVVI 313
Query: 361 ADESHFLKNAKAKRTSSSLPVLQKAKYVILLSGTPALSRPIELFKQLEALYPDVYKNSFH 540
ADESHFLKNA+AKRTS+SLPVLQKA+Y ILLSGTPALSRPIELFKQLEALYPDVY+N H
Sbjct: 314 ADESHFLKNAQAKRTSASLPVLQKAQYTILLSGTPALSRPIELFKQLEALYPDVYRN-VH 372
Query: 541 EYGNRFCKGGIFGEYQGASNHEELHNLMKATVMIRRLKKDVLSELPVKRRQQVFLEVADK 720
EYGNR+CKGG+FG YQGASNHEELHNLMKATV+IRRLKKDVLSELPVKRRQQVFL++ +K
Sbjct: 373 EYGNRYCKGGVFGMYQGASNHEELHNLMKATVLIRRLKKDVLSELPVKRRQQVFLDLDEK 432
Query: 721 DMKQINALFRELDLVKIKIKDCESKEDLDSHKFSEKNLINKIYNDSADAKIPAVKEYLET 900
DMKQINALFREL++VK KIK +SKE+ +S KFSEKNLINKIY DSA AKIPAV +YL T
Sbjct: 433 DMKQINALFRELEVVKSKIKASKSKEEAESLKFSEKNLINKIYTDSAQAKIPAVLDYLGT 492
Query: 901 VIEAGCKFLIFAHHKAMIDSIHQFLLKKKVGCIRIDGGTPASSRQALVTDFQDKEGIKAA 1080
V+EAGCKFLIFAHH+ MIDSI QFL+KKKVGCIRIDG TP+SSRQA VTDFQ+K+ IKAA
Sbjct: 493 VVEAGCKFLIFAHHQPMIDSIFQFLVKKKVGCIRIDGSTPSSSRQAFVTDFQEKDTIKAA 552
Query: 1081 VLSIKAGGIGLTLTAASTVIFAELSWTPGDIIQAEDRVHRIGQVSSVNIYYLLANYTIDD 1260
VLSIKAGG+GLTLTAASTVIFAELSWTPGD+IQAEDRVHRIGQVSSVNI+YLLAN T+DD
Sbjct: 553 VLSIKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRVHRIGQVSSVNIHYLLANDTVDD 612
Query: 1261 IIWDAVQNKLENLGQMLDGHENALEVSVSQLKSSPAKQRTLDSFMKRCQSSTNDELDNST 1440
IIWD VQ+KLENLGQMLDGHEN LEVSVSQ +SSP+KQRT+DSFMKRC + +DN
Sbjct: 613 IIWDVVQSKLENLGQMLDGHENTLEVSVSQPRSSPSKQRTIDSFMKRC-----NNVDNPE 667
Query: 1441 CDRPLKYPRN 1470
LK+PRN
Sbjct: 668 HQPNLKHPRN 677
>ref|XP_002519341.1| Chromatin remodelling complex ATPase chain isw-1, putative [Ricinus
communis] gi|223541656|gb|EEF43205.1| Chromatin
remodelling complex ATPase chain isw-1, putative [Ricinus
communis]
Length = 674
Score = 790 bits (2039), Expect = 0.0
Identities = 397/490 (81%), Positives = 447/490 (91%)
Frame = +1
Query: 1 RFVLQHGGRVLIADEMGLGKTLQAIAVTACIRDSWPVLVLTPSSLRLQWATMIQQWLNIP 180
RFVLQHGGR LIADEMGLGKTLQAIAVTAC+RD WPVL+LTPSSLRL WA+MIQQWL+IP
Sbjct: 191 RFVLQHGGRALIADEMGLGKTLQAIAVTACLRDFWPVLILTPSSLRLHWASMIQQWLHIP 250
Query: 181 STDILVVLSQCSGSNRGGFTIVHSNAKSTIHLDGVFNIISYDSVPKLEQLLMASEFKIVI 360
S+DILVVLSQ SGSNRGGFTIV SN K +IHLDG+FNIISYD VPKL+ +LMASEFK+VI
Sbjct: 251 SSDILVVLSQWSGSNRGGFTIVSSNTKGSIHLDGLFNIISYDVVPKLQNVLMASEFKVVI 310
Query: 361 ADESHFLKNAKAKRTSSSLPVLQKAKYVILLSGTPALSRPIELFKQLEALYPDVYKNSFH 540
ADESHF+KNA+AKRT++SLPV++KA+Y +LLSGTPALSRPIELFKQLEALYPDVY+N H
Sbjct: 311 ADESHFMKNAQAKRTTASLPVIKKAQYAVLLSGTPALSRPIELFKQLEALYPDVYRN-VH 369
Query: 541 EYGNRFCKGGIFGEYQGASNHEELHNLMKATVMIRRLKKDVLSELPVKRRQQVFLEVADK 720
EYGNR+C+GGIFG YQGASNHEELHNLMKATVMIRRLKKDVL+ELP+KRRQQVFL++A+K
Sbjct: 370 EYGNRYCRGGIFGVYQGASNHEELHNLMKATVMIRRLKKDVLAELPLKRRQQVFLDLAEK 429
Query: 721 DMKQINALFRELDLVKIKIKDCESKEDLDSHKFSEKNLINKIYNDSADAKIPAVKEYLET 900
DMK+INALFREL++VK KIK C S E+++S KFSEKN+INKIY DSA+AKIP V +YL T
Sbjct: 430 DMKKINALFRELEVVKGKIKACSSAEEVESLKFSEKNIINKIYTDSAEAKIPGVLDYLAT 489
Query: 901 VIEAGCKFLIFAHHKAMIDSIHQFLLKKKVGCIRIDGGTPASSRQALVTDFQDKEGIKAA 1080
VIEAGCKFLIFAHH+ MIDSIH+FL+KKKVGCIRIDG TP SRQ+LVTDFQ+K+ IKAA
Sbjct: 490 VIEAGCKFLIFAHHQPMIDSIHEFLVKKKVGCIRIDGRTPPVSRQSLVTDFQEKDAIKAA 549
Query: 1081 VLSIKAGGIGLTLTAASTVIFAELSWTPGDIIQAEDRVHRIGQVSSVNIYYLLANYTIDD 1260
VLSIKAGG+GLTLTAASTVIFAELSWTPGD+IQAEDR HRIGQVSSVNIYYLLAN T+DD
Sbjct: 550 VLSIKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNIYYLLANDTVDD 609
Query: 1261 IIWDAVQNKLENLGQMLDGHENALEVSVSQLKSSPAKQRTLDSFMKRCQSSTNDELDNST 1440
IIWD VQ+KLENLGQMLDGHENALEVS SQ +SSPAKQ+TLDSF+KRC S DEL+ T
Sbjct: 610 IIWDVVQSKLENLGQMLDGHENALEVSASQQRSSPAKQKTLDSFLKRC--SNMDELEQQT 667
Query: 1441 CDRPLKYPRN 1470
LK PR+
Sbjct: 668 ---KLKCPRH 674
>ref|XP_003541328.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A-like protein 1-like
[Glycine max]
Length = 665
Score = 768 bits (1983), Expect = 0.0
Identities = 382/490 (77%), Positives = 438/490 (89%)
Frame = +1
Query: 1 RFVLQHGGRVLIADEMGLGKTLQAIAVTACIRDSWPVLVLTPSSLRLQWATMIQQWLNIP 180
RF+LQHGGRVL+ADEMGLGKTLQAIAV +C++DSWPVL++ PSSLRLQWA+MIQQWLNIP
Sbjct: 182 RFILQHGGRVLLADEMGLGKTLQAIAVASCVQDSWPVLIIAPSSLRLQWASMIQQWLNIP 241
Query: 181 STDILVVLSQCSGSNRGGFTIVHSNAKSTIHLDGVFNIISYDSVPKLEQLLMASEFKIVI 360
S+DIL+VLSQ GSNRGGF IV S+AKS+IHLDG+FNIISYD VPKL+ +LM FK+VI
Sbjct: 242 SSDILIVLSQNGGSNRGGFNIVSSSAKSSIHLDGLFNIISYDLVPKLQNMLMTCNFKVVI 301
Query: 361 ADESHFLKNAKAKRTSSSLPVLQKAKYVILLSGTPALSRPIELFKQLEALYPDVYKNSFH 540
ADESHFLKNA+AKRT++SLPV++KA+Y +LLSGTPALSRPIELFKQLEALYPDVY+N H
Sbjct: 302 ADESHFLKNAQAKRTTASLPVIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYRN-VH 360
Query: 541 EYGNRFCKGGIFGEYQGASNHEELHNLMKATVMIRRLKKDVLSELPVKRRQQVFLEVADK 720
EYGNR+CKGG FG YQGASNHEELHNL+KATVMIRRLKKDVLS+LPVKRRQQVFL++A K
Sbjct: 361 EYGNRYCKGGFFGVYQGASNHEELHNLIKATVMIRRLKKDVLSQLPVKRRQQVFLDLAGK 420
Query: 721 DMKQINALFRELDLVKIKIKDCESKEDLDSHKFSEKNLINKIYNDSADAKIPAVKEYLET 900
DMKQINALFREL++VK KIK +S+E+ +S KF++KNLINKIY DSA+AKIP+V +Y+ T
Sbjct: 421 DMKQINALFRELEMVKAKIKAAKSQEEAESLKFAQKNLINKIYTDSAEAKIPSVLDYVGT 480
Query: 901 VIEAGCKFLIFAHHKAMIDSIHQFLLKKKVGCIRIDGGTPASSRQALVTDFQDKEGIKAA 1080
VIEAGCKFLIFAHH+ MIDSIH+FLLKKKVGCIRIDG TPA+SRQ LVTDFQ+K+ IKAA
Sbjct: 481 VIEAGCKFLIFAHHQPMIDSIHEFLLKKKVGCIRIDGSTPAASRQQLVTDFQEKDSIKAA 540
Query: 1081 VLSIKAGGIGLTLTAASTVIFAELSWTPGDIIQAEDRVHRIGQVSSVNIYYLLANYTIDD 1260
VLSIKAGG+GLTLTAASTVIF+ELSWTPGD+IQAEDR HRIGQVSSVNIYYLLAN T+DD
Sbjct: 541 VLSIKAGGVGLTLTAASTVIFSELSWTPGDLIQAEDRAHRIGQVSSVNIYYLLANDTVDD 600
Query: 1261 IIWDAVQNKLENLGQMLDGHENALEVSVSQLKSSPAKQRTLDSFMKRCQSSTNDELDNST 1440
IIWD VQNKLENLGQMLDGHENALEVS S +SP+KQ+TLD F++RC D D
Sbjct: 601 IIWDVVQNKLENLGQMLDGHENALEVSASLPVNSPSKQKTLDQFVRRC-----DNTDGLE 655
Query: 1441 CDRPLKYPRN 1470
+ K PRN
Sbjct: 656 YEPNPKRPRN 665
>ref|XP_003550580.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A-like protein 1-like
[Glycine max]
Length = 751
Score = 754 bits (1948), Expect = 0.0
Identities = 369/467 (79%), Positives = 430/467 (92%)
Frame = +1
Query: 1 RFVLQHGGRVLIADEMGLGKTLQAIAVTACIRDSWPVLVLTPSSLRLQWATMIQQWLNIP 180
RF+LQHGGRVL+ADEMGLGKTLQAIAV +CI+D WPVL++ PSSLRLQWA+MIQQWLNIP
Sbjct: 245 RFILQHGGRVLLADEMGLGKTLQAIAVASCIQDLWPVLIIAPSSLRLQWASMIQQWLNIP 304
Query: 181 STDILVVLSQCSGSNRGGFTIVHSNAKSTIHLDGVFNIISYDSVPKLEQLLMASEFKIVI 360
S+DIL+VLSQ GSNRGGF IV S+AKS+I LDG+FNIISYD VPKL+ +LM +FK+VI
Sbjct: 305 SSDILIVLSQSGGSNRGGFNIVSSSAKSSIRLDGLFNIISYDLVPKLQNMLMTHDFKVVI 364
Query: 361 ADESHFLKNAKAKRTSSSLPVLQKAKYVILLSGTPALSRPIELFKQLEALYPDVYKNSFH 540
ADESHFLKNA+AKRT++SLPV++KA+Y +LLSGTPALSRPIELFKQLEALYPDVY+N H
Sbjct: 365 ADESHFLKNAQAKRTTASLPVIKKAQYALLLSGTPALSRPIELFKQLEALYPDVYRN-VH 423
Query: 541 EYGNRFCKGGIFGEYQGASNHEELHNLMKATVMIRRLKKDVLSELPVKRRQQVFLEVADK 720
EYGNR+CKGG+FG YQGASNHEELHNL+KATVMIRRLKKDVLS+LPVKRRQQVFL++ +K
Sbjct: 424 EYGNRYCKGGVFGVYQGASNHEELHNLIKATVMIRRLKKDVLSQLPVKRRQQVFLDLENK 483
Query: 721 DMKQINALFRELDLVKIKIKDCESKEDLDSHKFSEKNLINKIYNDSADAKIPAVKEYLET 900
DMKQINALF+EL++VK KIK +S+E+ +S KF++KNLINKIY DSA+AKIP+V +Y+ T
Sbjct: 484 DMKQINALFQELEMVKAKIKAAKSQEEAESLKFAQKNLINKIYTDSAEAKIPSVLDYIGT 543
Query: 901 VIEAGCKFLIFAHHKAMIDSIHQFLLKKKVGCIRIDGGTPASSRQALVTDFQDKEGIKAA 1080
VIEAGCKFLIFAHH+ MIDSIH+FLLKKKVGCIRIDGGTPA+SRQ LVTDFQ+K+ IKAA
Sbjct: 544 VIEAGCKFLIFAHHQPMIDSIHEFLLKKKVGCIRIDGGTPAASRQQLVTDFQEKDAIKAA 603
Query: 1081 VLSIKAGGIGLTLTAASTVIFAELSWTPGDIIQAEDRVHRIGQVSSVNIYYLLANYTIDD 1260
VLSIKAGG+GLTLTAASTVIFAELSWTPGD+IQAEDR HRIGQVSSVNIYYLLAN T+DD
Sbjct: 604 VLSIKAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNIYYLLANDTVDD 663
Query: 1261 IIWDAVQNKLENLGQMLDGHENALEVSVSQLKSSPAKQRTLDSFMKR 1401
IIWD VQ+KLENLGQMLDGHEN LEVS S +SP+KQ+T+D ++++
Sbjct: 664 IIWDVVQSKLENLGQMLDGHENVLEVSASLPVNSPSKQKTIDQYVRK 710
>ref|XP_002315473.1| chromatin remodeling complex subunit [Populus trichocarpa]
gi|222864513|gb|EEF01644.1| chromatin remodeling complex
subunit [Populus trichocarpa]
Length = 670
Score = 754 bits (1946), Expect = 0.0
Identities = 385/498 (77%), Positives = 437/498 (87%), Gaps = 9/498 (1%)
Frame = +1
Query: 1 RFVLQHGGRVLIADEMGLGKTLQAI---------AVTACIRDSWPVLVLTPSSLRLQWAT 153
RFVLQHGGR L+ADEMGLGKTLQAI +++ C+R+SWPVL+L PSSLRL WA+
Sbjct: 180 RFVLQHGGRALLADEMGLGKTLQAIYLLISISILSISTCVRNSWPVLILAPSSLRLHWAS 239
Query: 154 MIQQWLNIPSTDILVVLSQCSGSNRGGFTIVHSNAKSTIHLDGVFNIISYDSVPKLEQLL 333
I QWL+IPS+DILVVLSQ SGSNR GF IV S+++STI LDG+FNIISYD+VPKL+ L
Sbjct: 240 TIHQWLDIPSSDILVVLSQSSGSNRAGFNIV-SSSRSTIRLDGLFNIISYDAVPKLQNKL 298
Query: 334 MASEFKIVIADESHFLKNAKAKRTSSSLPVLQKAKYVILLSGTPALSRPIELFKQLEALY 513
M SEFK+VIADESHFLKNA+AKRT++SLPV++KA+Y ILLSGTPALSRPIELFKQLEALY
Sbjct: 299 MTSEFKVVIADESHFLKNAQAKRTTASLPVIKKAQYAILLSGTPALSRPIELFKQLEALY 358
Query: 514 PDVYKNSFHEYGNRFCKGGIFGEYQGASNHEELHNLMKATVMIRRLKKDVLSELPVKRRQ 693
PDVYKN HEYGNR+CKGGIFG YQGASNHEELHNL+KATVMIRRLKKDVLSELPVKRRQ
Sbjct: 359 PDVYKN-VHEYGNRYCKGGIFGVYQGASNHEELHNLIKATVMIRRLKKDVLSELPVKRRQ 417
Query: 694 QVFLEVADKDMKQINALFRELDLVKIKIKDCESKEDLDSHKFSEKNLINKIYNDSADAKI 873
QVFL++ +KDMKQIN LFREL++VK KIK C S E+++S KF+EKNLINKIY DSA+AKI
Sbjct: 418 QVFLDLPEKDMKQINTLFRELEVVKGKIKACASDEEVESLKFTEKNLINKIYTDSAEAKI 477
Query: 874 PAVKEYLETVIEAGCKFLIFAHHKAMIDSIHQFLLKKKVGCIRIDGGTPASSRQALVTDF 1053
V +YL TVIEAGCKFLIFAHH++MIDSIH+FLLKKKVGCIRIDG T A+SRQALVTDF
Sbjct: 478 SGVLDYLGTVIEAGCKFLIFAHHQSMIDSIHEFLLKKKVGCIRIDGKTAAASRQALVTDF 537
Query: 1054 QDKEGIKAAVLSIKAGGIGLTLTAASTVIFAELSWTPGDIIQAEDRVHRIGQVSSVNIYY 1233
Q+K+ IKAAVLSI+AGG+GLTLTAASTVIFAELSWTPGD+IQAEDR HRIGQVSSVNIYY
Sbjct: 538 QEKDAIKAAVLSIRAGGVGLTLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNIYY 597
Query: 1234 LLANYTIDDIIWDAVQNKLENLGQMLDGHENALEVSVSQLKSSPAKQRTLDSFMKRCQSS 1413
LLAN T+DDIIWD VQ+KLENLGQMLDG E LEVS SQ +SSPAKQRTLD++MKRC +
Sbjct: 598 LLANDTVDDIIWDVVQSKLENLGQMLDGQEKTLEVSASQQRSSPAKQRTLDTYMKRCSN- 656
Query: 1414 TNDELDNSTCDRPLKYPR 1467
LD+S LKYPR
Sbjct: 657 ----LDDSEHQPKLKYPR 670