BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00011689
         (1460 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002262822.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H...   202   1e-49
gb|AEC04825.1| ubiquitin ligase protein [Vitis pseudoreticulata]      200   7e-49
ref|XP_003529322.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H...   200   9e-49
ref|XP_003545948.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H...   196   1e-47
gb|ACU19159.1| unknown [Glycine max]                                  195   2e-47

>ref|XP_002262822.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1 isoform 1 [Vitis
           vinifera] gi|359497380|ref|XP_003635497.1| PREDICTED: E3
           ubiquitin-protein ligase RMA1H1 isoform 2 [Vitis
           vinifera] gi|359497382|ref|XP_003635498.1| PREDICTED: E3
           ubiquitin-protein ligase RMA1H1 isoform 3 [Vitis
           vinifera] gi|147810574|emb|CAN63097.1| hypothetical
           protein VITISV_013326 [Vitis vinifera]
          Length = 240

 Score =  202 bits (515), Expect = 1e-49
 Identities = 108/214 (50%), Positives = 130/214 (60%), Gaps = 6/214 (2%)
 Frame = -1

Query: 848 SAATTSDTLAGCFDCNICLDNAHDPVVTLCGHLYCWPCIYQWIHFQGASITPEEQQQCPV 669
           +AAT ++ L   F+CNIC D+A DPVVTLCGHLYCWPC+Y+W H Q AS+  +E  QCPV
Sbjct: 16  AAATEAENLNDSFECNICFDSARDPVVTLCGHLYCWPCVYKWFHVQSASLASDEHPQCPV 75

Query: 668 CKAGISQTTLVPLYGRGQS-SHDESKDQGSLRGLDIPSRPRACGVDALIXXXXXXXXXXX 492
           CKA IS TTLVPLYGRGQ+ S  E + +    G+ IP RP ACG  ALI           
Sbjct: 76  CKAEISHTTLVPLYGRGQTPSETELEGKTHCFGMAIPPRPPACGTQALI--NATSHNGQQ 133

Query: 491 XXHRNPYR-----XXXXXXXXXHFQNRFGXXXXXXXXXXXPMIGMFGEMFYTRIFGNSPA 327
             +RNPY+                 +                +GMFGEM Y R+FGNS  
Sbjct: 134 LQYRNPYQNQQYDPHPYNDYEHDSPSSLFNMGGSTATSFFHPVGMFGEMVYARVFGNS-- 191

Query: 326 TSLYWYPNSYHHTGNTSPRARRQEMQAEKSLNRI 225
            SLY YPNSYH TG+++PR RRQEMQA+KSLNRI
Sbjct: 192 ESLYAYPNSYHLTGSSTPRLRRQEMQADKSLNRI 225


>gb|AEC04825.1| ubiquitin ligase protein [Vitis pseudoreticulata]
          Length = 240

 Score =  200 bits (509), Expect = 7e-49
 Identities = 107/214 (50%), Positives = 129/214 (60%), Gaps = 6/214 (2%)
 Frame = -1

Query: 848 SAATTSDTLAGCFDCNICLDNAHDPVVTLCGHLYCWPCIYQWIHFQGASITPEEQQQCPV 669
           +AAT ++ L   F+CNIC D+A DPVVTLCGHLYCWPC+Y+W H Q AS+  +E  QCPV
Sbjct: 16  AAATEAENLNDSFECNICFDSARDPVVTLCGHLYCWPCVYKWFHVQSASLASDEHPQCPV 75

Query: 668 CKAGISQTTLVPLYGRGQS-SHDESKDQGSLRGLDIPSRPRACGVDALIXXXXXXXXXXX 492
           CKA IS TTLVPLYGRGQ+ S  E + +    G+ IP RP ACG  ALI           
Sbjct: 76  CKAEISHTTLVPLYGRGQTPSETELEGKTHCFGMAIPPRPPACGTQALI--NATSHNGQQ 133

Query: 491 XXHRNPYR-----XXXXXXXXXHFQNRFGXXXXXXXXXXXPMIGMFGEMFYTRIFGNSPA 327
             +RNPY+                 +                +GMFGEM Y R+FGNS  
Sbjct: 134 LQYRNPYQNQQYDPHPYNDYEHDSPSSLFNMGGSTATSFFHPVGMFGEMVYARVFGNS-- 191

Query: 326 TSLYWYPNSYHHTGNTSPRARRQEMQAEKSLNRI 225
            SLY YPNSYH TG+++PR R QEMQA+KSLNRI
Sbjct: 192 ESLYAYPNSYHLTGSSTPRLRTQEMQADKSLNRI 225


>ref|XP_003529322.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like [Glycine max]
          Length = 248

 Score =  200 bits (508), Expect = 9e-49
 Identities = 108/218 (49%), Positives = 127/218 (58%), Gaps = 10/218 (4%)
 Frame = -1

Query: 848 SAATTSDTLAGCFDCNICLDNAHDPVVTLCGHLYCWPCIYQWIHFQGASITPEEQQQCPV 669
           S  T ++ L GCFDCNICLD AH+PVVTLCGHLYCWPCIY+W+H Q AS+ P+E  QCPV
Sbjct: 20  SPMTVTENLDGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLAPDEHPQCPV 79

Query: 668 CKAGISQTTLVPLYGRGQSSHDESKD--QGSLRGLDIPSRPRACGVDALIXXXXXXXXXX 495
           CK  I  TT+VPLYGRGQ      +D    S RG  IP RP A G  +L+          
Sbjct: 80  CKDDICHTTMVPLYGRGQGIAHSDRDGKASSYRGSFIPPRPPALGAQSLM--STSSQSAQ 137

Query: 494 XXXHRNPYRXXXXXXXXXHFQNRFG------XXXXXXXXXXXPMIGMFGEMFYTRIFGNS 333
              +RNPY+           ++                     ++GMFGEM Y R+FGNS
Sbjct: 138 QLPYRNPYQNQHFNPPLYQDEDESSSQMLNPGANMVAPGFPHLVVGMFGEMLYARVFGNS 197

Query: 332 PATSLYWYPNSYHHTG--NTSPRARRQEMQAEKSLNRI 225
              +LY YPNSYH  G  N SPR RRQEMQA KSLNRI
Sbjct: 198 --ENLYNYPNSYHLGGSNNNSPRLRRQEMQANKSLNRI 233


>ref|XP_003545948.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like [Glycine max]
          Length = 232

 Score =  196 bits (498), Expect = 1e-47
 Identities = 104/208 (50%), Positives = 127/208 (61%)
 Frame = -1

Query: 848 SAATTSDTLAGCFDCNICLDNAHDPVVTLCGHLYCWPCIYQWIHFQGASITPEEQQQCPV 669
           +AAT ++   GCFDCNICLD AH+PVVTLCGHLYCWPCIY+W+H Q  S+ P+E  QCPV
Sbjct: 16  NAATETENSNGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSDSLAPDEHPQCPV 75

Query: 668 CKAGISQTTLVPLYGRGQSSHDESKDQGSLRGLDIPSRPRACGVDALIXXXXXXXXXXXX 489
           CKA IS +T+VPLYGRG ++  E K   S   + IP RP A  V AL+            
Sbjct: 76  CKADISNSTMVPLYGRGHAATAEGKT--SSCDVFIPPRPSASCVQALL--ATSSQRGQHL 131

Query: 488 XHRNPYRXXXXXXXXXHFQNRFGXXXXXXXXXXXPMIGMFGEMFYTRIFGNSPATSLYWY 309
            +RNPY+           ++              P+ GMFGEM Y R+FGN    +LY Y
Sbjct: 132 PYRNPYQGHYFSSHPYQEEDDATSQMLNLGSHHHPVTGMFGEMVYARVFGN--PENLYAY 189

Query: 308 PNSYHHTGNTSPRARRQEMQAEKSLNRI 225
           PNSY   G+ +PR RRQEMQA KSLNRI
Sbjct: 190 PNSYQLMGSATPRLRRQEMQAHKSLNRI 217


>gb|ACU19159.1| unknown [Glycine max]
          Length = 232

 Score =  195 bits (496), Expect = 2e-47
 Identities = 104/208 (50%), Positives = 127/208 (61%)
 Frame = -1

Query: 848 SAATTSDTLAGCFDCNICLDNAHDPVVTLCGHLYCWPCIYQWIHFQGASITPEEQQQCPV 669
           +AAT ++   GCFDCNICLD AH+PVVTLCGHLYCWPCIY+W+H Q  S+ P+E  QCPV
Sbjct: 16  NAATETENSNGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSDSLAPDEHPQCPV 75

Query: 668 CKAGISQTTLVPLYGRGQSSHDESKDQGSLRGLDIPSRPRACGVDALIXXXXXXXXXXXX 489
           CKA IS +T+VPLYGRG ++  E K   S   + IP RP A  V AL+            
Sbjct: 76  CKADISNSTMVPLYGRGHAATAEGKT--SSCDVFIPPRPFASCVQALL--ATSSQRGQHL 131

Query: 488 XHRNPYRXXXXXXXXXHFQNRFGXXXXXXXXXXXPMIGMFGEMFYTRIFGNSPATSLYWY 309
            +RNPY+           ++              P+ GMFGEM Y R+FGN    +LY Y
Sbjct: 132 PYRNPYQGHYFSFHPYQEEDDATSQMLNLGSHHHPVTGMFGEMVYARVFGN--PENLYAY 189

Query: 308 PNSYHHTGNTSPRARRQEMQAEKSLNRI 225
           PNSY   G+ +PR RRQEMQA KSLNRI
Sbjct: 190 PNSYQLMGSATPRLRRQEMQAHKSLNRI 217