BLASTX nr result

ID: Coptis23_contig00011639 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00011639
         (374 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283893.1| PREDICTED: cell division control protein 45 ...    82   8e-18
emb|CAN78533.1| hypothetical protein VITISV_006310 [Vitis vinifera]    82   8e-18
emb|CBI31762.3| unnamed protein product [Vitis vinifera]               82   8e-18
ref|NP_001169177.1| uncharacterized protein LOC100383027 [Zea ma...    79   3e-17
ref|XP_002442724.1| hypothetical protein SORBIDRAFT_08g001810 [S...    79   4e-17

>ref|XP_002283893.1| PREDICTED: cell division control protein 45 homolog [Vitis
           vinifera]
          Length = 592

 Score = 82.0 bits (201), Expect(2) = 8e-18
 Identities = 37/46 (80%), Positives = 43/46 (93%)
 Frame = -1

Query: 338 EQNKFLIVGVCGKPRLGALQGNAFGVAFRVAADEIGAEYFHEMFES 201
           E NK LIVGVCGKPRLGA+QGNAFG+AFR AA+EIGA++FHE+FES
Sbjct: 526 EPNKVLIVGVCGKPRLGAVQGNAFGIAFRNAAEEIGADFFHELFES 571



 Score = 33.1 bits (74), Expect(2) = 8e-18
 Identities = 15/22 (68%), Positives = 19/22 (86%)
 Frame = -2

Query: 205 SLWMILDFVALISFMIRLSEKL 140
           S W++LD VA+ SFMIRL+EKL
Sbjct: 571 SSWIVLDAVAVNSFMIRLTEKL 592


>emb|CAN78533.1| hypothetical protein VITISV_006310 [Vitis vinifera]
          Length = 592

 Score = 82.0 bits (201), Expect(2) = 8e-18
 Identities = 37/46 (80%), Positives = 43/46 (93%)
 Frame = -1

Query: 338 EQNKFLIVGVCGKPRLGALQGNAFGVAFRVAADEIGAEYFHEMFES 201
           E NK LIVGVCGKPRLGA+QGNAFG+AFR AA+EIGA++FHE+FES
Sbjct: 526 EPNKVLIVGVCGKPRLGAVQGNAFGIAFRNAAEEIGADFFHELFES 571



 Score = 33.1 bits (74), Expect(2) = 8e-18
 Identities = 15/22 (68%), Positives = 19/22 (86%)
 Frame = -2

Query: 205 SLWMILDFVALISFMIRLSEKL 140
           S W++LD VA+ SFMIRL+EKL
Sbjct: 571 SSWIVLDAVAVNSFMIRLTEKL 592


>emb|CBI31762.3| unnamed protein product [Vitis vinifera]
          Length = 498

 Score = 82.0 bits (201), Expect(2) = 8e-18
 Identities = 37/46 (80%), Positives = 43/46 (93%)
 Frame = -1

Query: 338 EQNKFLIVGVCGKPRLGALQGNAFGVAFRVAADEIGAEYFHEMFES 201
           E NK LIVGVCGKPRLGA+QGNAFG+AFR AA+EIGA++FHE+FES
Sbjct: 432 EPNKVLIVGVCGKPRLGAVQGNAFGIAFRNAAEEIGADFFHELFES 477



 Score = 33.1 bits (74), Expect(2) = 8e-18
 Identities = 15/22 (68%), Positives = 19/22 (86%)
 Frame = -2

Query: 205 SLWMILDFVALISFMIRLSEKL 140
           S W++LD VA+ SFMIRL+EKL
Sbjct: 477 SSWIVLDAVAVNSFMIRLTEKL 498


>ref|NP_001169177.1| uncharacterized protein LOC100383027 [Zea mays]
           gi|223975321|gb|ACN31848.1| unknown [Zea mays]
           gi|223975855|gb|ACN32115.1| unknown [Zea mays]
           gi|413915946|gb|AFW55878.1| hypothetical protein
           ZEAMMB73_087442 [Zea mays]
          Length = 608

 Score = 79.3 bits (194), Expect(2) = 3e-17
 Identities = 36/46 (78%), Positives = 41/46 (89%)
 Frame = -1

Query: 338 EQNKFLIVGVCGKPRLGALQGNAFGVAFRVAADEIGAEYFHEMFES 201
           E  K L+VGVCGKPRLGA+QGNAFG AFR AA+EIGA+YFH+MFES
Sbjct: 542 EPEKVLVVGVCGKPRLGAVQGNAFGNAFRYAAEEIGADYFHDMFES 587



 Score = 33.9 bits (76), Expect(2) = 3e-17
 Identities = 15/22 (68%), Positives = 19/22 (86%)
 Frame = -2

Query: 205 SLWMILDFVALISFMIRLSEKL 140
           S W++LD VA+ SFMIRL+EKL
Sbjct: 587 SSWIVLDVVAVSSFMIRLTEKL 608


>ref|XP_002442724.1| hypothetical protein SORBIDRAFT_08g001810 [Sorghum bicolor]
           gi|241943417|gb|EES16562.1| hypothetical protein
           SORBIDRAFT_08g001810 [Sorghum bicolor]
          Length = 609

 Score = 79.0 bits (193), Expect(2) = 4e-17
 Identities = 36/46 (78%), Positives = 41/46 (89%)
 Frame = -1

Query: 338 EQNKFLIVGVCGKPRLGALQGNAFGVAFRVAADEIGAEYFHEMFES 201
           E  K L+VGVCGKPRLGA+QGNAFG AFR AA+EIGA+YFH+MFES
Sbjct: 543 EPEKVLVVGVCGKPRLGAVQGNAFGNAFRSAAEEIGADYFHDMFES 588



 Score = 33.9 bits (76), Expect(2) = 4e-17
 Identities = 15/22 (68%), Positives = 19/22 (86%)
 Frame = -2

Query: 205 SLWMILDFVALISFMIRLSEKL 140
           S W++LD VA+ SFMIRL+EKL
Sbjct: 588 SSWIVLDVVAVSSFMIRLTEKL 609


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