BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00011628
         (1142 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEL29573.1| geranyl-diphosphate synthase [Medicago sativa]         246   6e-63
ref|XP_002532570.1| geranyl geranyl pyrophosphate synthase, puta...   246   1e-62
ref|XP_003617556.1| Geranylgeranyl pyrophosphate synthase [Medic...   238   3e-60
dbj|BAF98300.1| geranyl-diphosphate synthase [Hevea brasiliensis]     237   4e-60
gb|AFK47692.1| unknown [Medicago truncatula]                          235   1e-59

>gb|AEL29573.1| geranyl-diphosphate synthase [Medicago sativa]
          Length = 301

 Score =  246 bits (629), Expect = 6e-63
 Identities = 125/232 (53%), Positives = 168/232 (72%), Gaps = 3/232 (1%)
 Frame = +2

Query: 137 KPMQVSMSQNQTSWAATINSEVEAHIKQALTGRNPASVYHPMNYLIFEIPRSMAPALCIA 316
           KP  V MS  QT + A+++++VEAH+KQ +T + P  V+ PM++LIF  P++  PALC+A
Sbjct: 33  KPTTVRMSMTQTPYWASLHADVEAHLKQTITIKEPLLVFEPMHHLIFTAPKTTVPALCLA 92

Query: 317 ACESVGGEKDQAIAAASALHLMHVSTYTHEYLQLSDQPKSKPMP--HHVYGANIELLTAD 490
           ACE VGG++ +AI+AASAL LM  +TYTHE+L LSD+P  KP P   HVYG N+ELLT D
Sbjct: 93  ACELVGGQRQEAISAASALLLMEAATYTHEHLPLSDRPGPKPGPMIDHVYGPNVELLTGD 152

Query: 491 SMVPFAYELLAAMDDPTNTNSDRILRVMIEIGRAVGS-QGMVNGQYLKVRCLGLDGDEPC 667
            +VPF +ELLA  D     NS+RIL+VM+EI RAVGS  G+++ QY+K    G DGDE C
Sbjct: 153 GIVPFGFELLARSDG--GENSERILKVMVEISRAVGSGGGVIDAQYMKTLGGGSDGDEIC 210

Query: 668 EKEMVDQVFEKKGGALYSSGAACGAILGGGTDEEIEKLRRYGLYVGMIHGIM 823
             E + +V EK  G L+S GA CG +LGGG +EEIE+LR++G YVG+I G++
Sbjct: 211 HVEEIRRVVEKYEGRLHSCGAVCGGVLGGGCEEEIERLRKFGFYVGIIQGMI 262


>ref|XP_002532570.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
           gi|223527725|gb|EEF29831.1| geranyl geranyl
           pyrophosphate synthase, putative [Ricinus communis]
          Length = 308

 Score =  246 bits (627), Expect = 1e-62
 Identities = 125/226 (55%), Positives = 162/226 (71%), Gaps = 2/226 (0%)
 Frame = +2

Query: 149 VSMSQNQTSWAATINSEVEAHIKQALTGRNPASVYHPMNYLIFEIPRSMAPALCIAACES 328
           V  + ++  +   IN+++E H+K+A+  R P  V+ PM++L F  PRS APALCIAACE 
Sbjct: 39  VMSNSSKIDYWTCINADIETHLKEAIPVRPPVVVFEPMHHLTFAAPRSFAPALCIAACEL 98

Query: 329 VGGEKDQAIAAASALHLMHVSTYTHEYLQLSDQPK--SKPMPHHVYGANIELLTADSMVP 502
           VGG +DQA+AAASAL LM  + +THE + L+D+P+  ++PM HH +G NIELLT D M+P
Sbjct: 99  VGGSRDQALAAASALRLMIAAAFTHENIPLTDRPRPSARPMFHHTFGPNIELLTGDGMIP 158

Query: 503 FAYELLAAMDDPTNTNSDRILRVMIEIGRAVGSQGMVNGQYLKVRCLGLDGDEPCEKEMV 682
           FA+ELLA +++P   NSDRILRVMIEI RA+GSQGMV GQY + +     GDE      +
Sbjct: 159 FAFELLAQLNNPAQDNSDRILRVMIEISRAMGSQGMVEGQYNEFQYDQSVGDELFHVAWL 218

Query: 683 DQVFEKKGGALYSSGAACGAILGGGTDEEIEKLRRYGLYVGMIHGI 820
             V +KK GA ++   ACGAILGGG +EEIEKLRRYGLYVG I GI
Sbjct: 219 RDVCKKKEGASHACAGACGAILGGGNEEEIEKLRRYGLYVGTIQGI 264


>ref|XP_003617556.1| Geranylgeranyl pyrophosphate synthase [Medicago truncatula]
           gi|355518891|gb|AET00515.1| Geranylgeranyl pyrophosphate
           synthase [Medicago truncatula]
          Length = 297

 Score =  238 bits (606), Expect = 3e-60
 Identities = 119/230 (51%), Positives = 166/230 (72%), Gaps = 1/230 (0%)
 Frame = +2

Query: 137 KPMQVSMSQNQTSWAATINSEVEAHIKQALTGRNPASVYHPMNYLIFEIPRSMAPALCIA 316
           K   + MS  QT + A++++++EAH+KQ +T + P  V+ PM++LIF  P++  PALC+A
Sbjct: 33  KSTTLRMSMTQTPYWASLHADIEAHLKQTITIKEPLVVFEPMHHLIFTAPKTTVPALCLA 92

Query: 317 ACESVGGEKDQAIAAASALHLMHVSTYTHEYLQLSDQPKSKPMPHHVYGANIELLTADSM 496
            CE VGG++ QAI+AASAL LM  +TYTHE+L L+D+P  +PM +HVYG N+ELLT D +
Sbjct: 93  TCELVGGQRHQAISAASALLLMEAATYTHEHLPLTDRP--RPMINHVYGPNMELLTGDGI 150

Query: 497 VPFAYELLAAMDDPTNTNSDRILRVMIEIGRAVGS-QGMVNGQYLKVRCLGLDGDEPCEK 673
           VPF +ELLA  D     NS+RIL+VM+EI RAVGS  G+++ QY K+   G DG+E C  
Sbjct: 151 VPFGFELLARSDG--GENSERILKVMVEISRAVGSGGGVIDAQYGKILYSGSDGEEKCHV 208

Query: 674 EMVDQVFEKKGGALYSSGAACGAILGGGTDEEIEKLRRYGLYVGMIHGIM 823
           E +  V EK  G L+S GA CG +LGGG +EEIE+LR++G YVG+I G++
Sbjct: 209 EEIRHVVEKYEGRLHSCGAVCGGVLGGGCEEEIERLRKFGYYVGIIQGMI 258


>dbj|BAF98300.1| geranyl-diphosphate synthase [Hevea brasiliensis]
          Length = 306

 Score =  237 bits (605), Expect = 4e-60
 Identities = 119/233 (51%), Positives = 168/233 (72%), Gaps = 3/233 (1%)
 Frame = +2

Query: 134 YKPMQVSMSQNQTSWAATINSEVEAHIKQALTGRNPASVYHPMNYLIFEIPRSMAPALCI 313
           ++PM V+MS +Q+ W++ +N++++ H+KQA+  R P +V+ PM +LI   P++ APALCI
Sbjct: 30  HRPMVVAMSTDQSYWSS-VNADLDTHLKQAIPIRQPLAVFEPMRHLILSAPQTSAPALCI 88

Query: 314 AACESVGGEKDQAIAAASALHLMHVSTYTHEYLQLSDQPKSKPMPHH---VYGANIELLT 484
           AACE VGG ++QA+AAASAL L+H S  THE L L+D+P+  PMP     +YG NIELL 
Sbjct: 89  AACELVGGHRNQAMAAASALRLVHASASTHENLPLTDRPR--PMPRTRPTLYGPNIELLI 146

Query: 485 ADSMVPFAYELLAAMDDPTNTNSDRILRVMIEIGRAVGSQGMVNGQYLKVRCLGLDGDEP 664
           AD ++P+ +ELLA  DD    NS+R+LR +IEI RA+GSQG++ GQY + +    +G+E 
Sbjct: 147 ADGIIPYGFELLARDDDAAENNSNRVLRAIIEISRAMGSQGVIEGQYNESQYEESEGEEI 206

Query: 665 CEKEMVDQVFEKKGGALYSSGAACGAILGGGTDEEIEKLRRYGLYVGMIHGIM 823
                +  V  KK G L++   ACGAILGGG+++EIEKLRRYGLYVGM+ GI+
Sbjct: 207 FHVGWLQNVCRKKEGTLHACAGACGAILGGGSEDEIEKLRRYGLYVGMVQGIL 259


>gb|AFK47692.1| unknown [Medicago truncatula]
          Length = 297

 Score =  235 bits (600), Expect = 1e-59
 Identities = 118/230 (51%), Positives = 165/230 (71%), Gaps = 1/230 (0%)
 Frame = +2

Query: 137 KPMQVSMSQNQTSWAATINSEVEAHIKQALTGRNPASVYHPMNYLIFEIPRSMAPALCIA 316
           K   +  S  QT + A++++++EAH+KQ +T + P  V+ PM++LIF  P++  PALC+A
Sbjct: 33  KSTTLRTSMTQTPYWASLHADIEAHLKQTITIKEPLVVFEPMHHLIFTAPKTTVPALCLA 92

Query: 317 ACESVGGEKDQAIAAASALHLMHVSTYTHEYLQLSDQPKSKPMPHHVYGANIELLTADSM 496
            CE VGG++ QAI+AASAL LM  +TYTHE+L L+D+P  +PM +HVYG N+ELLT D +
Sbjct: 93  TCEFVGGQRHQAISAASALLLMEAATYTHEHLPLTDRP--RPMINHVYGPNMELLTGDGI 150

Query: 497 VPFAYELLAAMDDPTNTNSDRILRVMIEIGRAVGS-QGMVNGQYLKVRCLGLDGDEPCEK 673
           VPF +ELLA  D     NS+RIL+VM+EI RAVGS  G+++ QY K+   G DG+E C  
Sbjct: 151 VPFGFELLARSDG--GENSERILKVMVEISRAVGSGGGVIDAQYGKILYSGSDGEEKCHV 208

Query: 674 EMVDQVFEKKGGALYSSGAACGAILGGGTDEEIEKLRRYGLYVGMIHGIM 823
           E +  V EK  G L+S GA CG +LGGG +EEIE+LR++G YVG+I G++
Sbjct: 209 EEIRHVVEKYEGRLHSCGAVCGGVLGGGCEEEIERLRKFGYYVGIIQGMI 258