BLASTX nr result

ID: Coptis23_contig00011625 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00011625
         (1255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283836.1| PREDICTED: uncharacterized protein LOC100259...   103   1e-19
emb|CAN78779.1| hypothetical protein VITISV_029753 [Vitis vinifera]   103   1e-19
gb|ABJ96380.1| expressed protein [Prunus persica]                      93   1e-16
ref|XP_003602909.1| MscS family inner membrane protein ynaI [Med...    79   2e-12
ref|XP_002533682.1| conserved hypothetical protein [Ricinus comm...    75   3e-11

>ref|XP_002283836.1| PREDICTED: uncharacterized protein LOC100259028 [Vitis vinifera]
          Length = 709

 Score =  103 bits (256), Expect = 1e-19
 Identities = 103/309 (33%), Positives = 131/309 (42%), Gaps = 2/309 (0%)
 Frame = -1

Query: 1255 ENIPFSDTIFTRARPDTNRPFLLIEP-YRINGDDKTKAHPRSARTNEEQVAKVNMNLLDK 1079
            ENIPF+D IFTR+    NRP LLIEP Y++NGDDKTKA   SA  NEE+ A +     D 
Sbjct: 468  ENIPFADPIFTRSSAAANRPLLLIEPSYKMNGDDKTKASTGSACQNEEKDANI-----DA 522

Query: 1078 SKSSKAKEVPPDGKVDMQVEETGFDTETDCEIVTMSQSKFADTMVATTSTPLNSKNGSNS 899
            S +S++K   PD K                               A  S+ L+S    N 
Sbjct: 523  SSTSESK---PDAK-------------------------------AGASSILDSTTDDN- 547

Query: 898  AALLYLNQGMSESVVANKVAATSIDLQKADSKVVATSDSKMDPGVAATSTDCGPASHISI 719
                              VAATSI     +SKV ATS S  DP +    TD         
Sbjct: 548  ------------------VAATSISNSSTNSKVSATSIS--DPKIQNMVTD--------- 578

Query: 718  SSSDERQNSGMDNVSVAKISSCQPCVPQLKGLDLMRTSSKDTSVLGVALEKHPVTSFDSG 539
             S+           S+ K+                    +D +  G A EK  +   +SG
Sbjct: 579  GSTQNNYEEQQSEASMEKV-------------------REDINPGGSAFEKPSLNFPESG 619

Query: 538  RDEVQYVPTVTSHFKQETETMPIPPSPQARSTLEDNIILGVALEGSKRTLLI-EEVVTLS 362
              +   +P+ T   KQ+     I     A   LE+NI+LGVALEGSKRTL I EE + +S
Sbjct: 620  AGKADGLPSATPLAKQDGNRASI-----ATPALEENIVLGVALEGSKRTLPIEEEEMVVS 674

Query: 361  PHSEEMKEL 335
            P   E KEL
Sbjct: 675  PSGAESKEL 683


>emb|CAN78779.1| hypothetical protein VITISV_029753 [Vitis vinifera]
          Length = 738

 Score =  103 bits (256), Expect = 1e-19
 Identities = 103/309 (33%), Positives = 131/309 (42%), Gaps = 2/309 (0%)
 Frame = -1

Query: 1255 ENIPFSDTIFTRARPDTNRPFLLIEP-YRINGDDKTKAHPRSARTNEEQVAKVNMNLLDK 1079
            ENIPF+D IFTR+    NRP LLIEP Y++NGDDKTKA   SA  NEE+ A +     D 
Sbjct: 497  ENIPFADPIFTRSSAAANRPLLLIEPSYKMNGDDKTKASTGSACQNEEKDANI-----DA 551

Query: 1078 SKSSKAKEVPPDGKVDMQVEETGFDTETDCEIVTMSQSKFADTMVATTSTPLNSKNGSNS 899
            S +S++K   PD K                               A  S+ L+S    N 
Sbjct: 552  SSTSESK---PDAK-------------------------------AGASSILDSTTDDN- 576

Query: 898  AALLYLNQGMSESVVANKVAATSIDLQKADSKVVATSDSKMDPGVAATSTDCGPASHISI 719
                              VAATSI     +SKV ATS S  DP +    TD         
Sbjct: 577  ------------------VAATSISNSSTNSKVSATSIS--DPKIQNMVTD--------- 607

Query: 718  SSSDERQNSGMDNVSVAKISSCQPCVPQLKGLDLMRTSSKDTSVLGVALEKHPVTSFDSG 539
             S+           S+ K+                    +D +  G A EK  +   +SG
Sbjct: 608  GSTQNNYEEQQSEASMEKV-------------------REDINPGGSAFEKPSLNFPESG 648

Query: 538  RDEVQYVPTVTSHFKQETETMPIPPSPQARSTLEDNIILGVALEGSKRTLLI-EEVVTLS 362
              +   +P+ T   KQ+     I     A   LE+NI+LGVALEGSKRTL I EE + +S
Sbjct: 649  AGKADGLPSATPLAKQDGNRASI-----ATPALEENIVLGVALEGSKRTLPIEEEEMVVS 703

Query: 361  PHSEEMKEL 335
            P   E KEL
Sbjct: 704  PSGAESKEL 712


>gb|ABJ96380.1| expressed protein [Prunus persica]
          Length = 705

 Score = 93.2 bits (230), Expect = 1e-16
 Identities = 89/308 (28%), Positives = 125/308 (40%), Gaps = 1/308 (0%)
 Frame = -1

Query: 1255 ENIPFSDTIFTRARPDTNRPFLLIEP-YRINGDDKTKAHPRSARTNEEQVAKVNMNLLDK 1079
            EN+PF+DTIFT +R   NRP+LLIEP Y+I+ DDK+KA  R  RTN ++ A+   +    
Sbjct: 460  ENVPFADTIFTHSRASNNRPYLLIEPSYKISSDDKSKASSRPTRTNGDKQAQAEASSTSD 519

Query: 1078 SKSSKAKEVPPDGKVDMQVEETGFDTETDCEIVTMSQSKFADTMVATTSTPLNSKNGSNS 899
            SK S AK              T    +TD ++   S S  + T   T+  P +     NS
Sbjct: 520  SKGSDAK-----------AGATLTHAQTDNKVAATSSSN-SSTNSKTSEMPTSEPQTRNS 567

Query: 898  AALLYLNQGMSESVVANKVAATSIDLQKADSKVVATSDSKMDPGVAATSTDCGPASHISI 719
            A                           +D  V + S+                      
Sbjct: 568  A---------------------------SDGSVRSNSEMLQ------------------- 581

Query: 718  SSSDERQNSGMDNVSVAKISSCQPCVPQLKGLDLMRTSSKDTSVLGVALEKHPVTSFDSG 539
            S ++  +N+G +   V    +  P +   K L     +S +T                S 
Sbjct: 582  SKNESTKNAGKETTGVDSKDASPPKMTSKKSL----VASPETG---------------SE 622

Query: 538  RDEVQYVPTVTSHFKQETETMPIPPSPQARSTLEDNIILGVALEGSKRTLLIEEVVTLSP 359
            + +V   P    H  ++    P+     AR  LE+NIILGVALEGSKRTL IEE      
Sbjct: 623  KADVPLAPLQAKHDGEK----PVSSPSIARPPLEENIILGVALEGSKRTLPIEEEDMARS 678

Query: 358  HSEEMKEL 335
             + E KEL
Sbjct: 679  LAAESKEL 686


>ref|XP_003602909.1| MscS family inner membrane protein ynaI [Medicago truncatula]
            gi|355491957|gb|AES73160.1| MscS family inner membrane
            protein ynaI [Medicago truncatula]
          Length = 716

 Score = 79.3 bits (194), Expect = 2e-12
 Identities = 57/170 (33%), Positives = 86/170 (50%), Gaps = 9/170 (5%)
 Frame = -1

Query: 1255 ENIPFSDTIFTRARPDTNRPFLLIE-PYRINGDDKTKAHPRSARTNEEQVAKVNMNLLDK 1079
            ENIPF D+IFTR+R   NRPFLLIE PY++NG+DK K   RS R NEE+ AKV+  +   
Sbjct: 475  ENIPFGDSIFTRSRAAVNRPFLLIEPPYKVNGEDKAKPSTRSTRGNEEKDAKVDEPVASD 534

Query: 1078 SKSSK---AKEVPPDGKVDMQVEETGFDTETDCEIVTMSQSKFADTMVATTSTPLNSKNG 908
            SKS +        P         ++  D +T        Q+  +D+ V  TS  +  K  
Sbjct: 535  SKSDENFAGTSTSPSSVNSKDKSKSKSDAQT--------QNMGSDSSVEKTSKTMQPKKE 586

Query: 907  S----NSAALLYLNQGMSESVVANKV-AATSIDLQKADSKVVATSDSKMD 773
            +       + + + +  + SVV+  +   T+ +  +AD+    +S SK D
Sbjct: 587  TAGDVGKGSTIPVPKTPAHSVVSETLPVITNHESSRADTASATSSQSKQD 636



 Score = 69.3 bits (168), Expect = 2e-09
 Identities = 64/170 (37%), Positives = 86/170 (50%), Gaps = 9/170 (5%)
 Frame = -1

Query: 820  QKADSKV--VATSDSKMDPGVAATSTDCGPASHISISSSD---ERQNSGMDNVSVAKISS 656
            ++ D+KV     SDSK D   A TST     +    S S    + QN G D+ SV K S 
Sbjct: 521  EEKDAKVDEPVASDSKSDENFAGTSTSPSSVNSKDKSKSKSDAQTQNMGSDS-SVEKTSK 579

Query: 655  CQPCVPQLKGLDLMRTSS---KDTSVLGVALEKHPV-TSFDSGRDEVQYVPTVTSHFKQE 488
                  +  G D+ + S+     T    V  E  PV T+ +S R +       +S  KQ+
Sbjct: 580  TMQPKKETAG-DVGKGSTIPVPKTPAHSVVSETLPVITNHESSRADT--ASATSSQSKQD 636

Query: 487  TETMPIPPSPQARSTLEDNIILGVALEGSKRTLLIEEVVTLSPHSEEMKE 338
             E   +P S   R+ LE+NI+LGVALEGSKRTL IEE +  SP+S E +E
Sbjct: 637  EEKSSVPSSA-VRTPLEENILLGVALEGSKRTLPIEEEMNPSPNSAESQE 685


>ref|XP_002533682.1| conserved hypothetical protein [Ricinus communis]
            gi|223526417|gb|EEF28698.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 654

 Score = 75.5 bits (184), Expect = 3e-11
 Identities = 79/241 (32%), Positives = 110/241 (45%), Gaps = 12/241 (4%)
 Frame = -1

Query: 1255 ENIPFSDTIFTRARPDTNRPFLLIEP-YRINGDDKTKAHPRSARTNEEQVAKVNMNLLDK 1079
            ENIPF+D+I+ R    +NRP LLIEP YRINGDDK K+  R  R   +Q  K        
Sbjct: 372  ENIPFADSIYNRGGSASNRPLLLIEPSYRINGDDKAKSQTRQGRGAGDQENKAASRSTPD 431

Query: 1078 SKS-------SKAKEVPPDGKVDMQVEET-GFDTETDCEIVT--MSQSKFADTMVATTST 929
            +K+       SK KE P   K D +V ET   D +   +  T  MS  K  D M +  S+
Sbjct: 432  TKAGVGPKSDSKTKEAP---KSDAKVGETPNSDAKEHIKGATTSMSDPKVGDKM-SVKSS 487

Query: 928  PLNSKNGSNSAALLYLNQGMSESVVANKVAATSIDLQKADSKVVATSDSK-MDPGVAATS 752
            P +    SN A           S   +K AA+  D    + K+  +  SK  +PG    +
Sbjct: 488  PNSVPKTSNLA---------ESSSPESKAAASVSDNVIQNKKIPDSKQSKSANPGNGRQN 538

Query: 751  TDCGPASHISISSSDERQNSGMDNVSVAKISSCQPCVPQLKGLDLMRTSSKDTSVLGVAL 572
            T     S +S+S +   + SG+     +K  + +    Q       R S ++  VLGVAL
Sbjct: 539  TQLDNPS-VSLSDAGTEKASGLQESPQSKQGAERKSNGQ---SSTSRPSLEENIVLGVAL 594

Query: 571  E 569
            E
Sbjct: 595  E 595


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