BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00011622
         (2354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278370.2| PREDICTED: protein KIAA0664 homolog [Vitis v...   413   e-112
ref|XP_002523351.1| eukaryotic translation initiation factor 3 s...   362   2e-97
ref|XP_002320200.1| predicted protein [Populus trichocarpa] gi|2...   330   1e-87
ref|XP_003548395.1| PREDICTED: protein TIF31 homolog [Glycine max]    323   1e-85
ref|XP_003528792.1| PREDICTED: uncharacterized protein LOC100808...   312   2e-82

>ref|XP_002278370.2| PREDICTED: protein KIAA0664 homolog [Vitis vinifera]
          Length = 1863

 Score =  413 bits (1061), Expect = e-112
 Identities = 258/602 (42%), Positives = 340/602 (56%), Gaps = 12/602 (1%)
 Frame = -3

Query: 2352 NHQKKDVSVEPDHSKVKNSQPNSRYYLLKKRAVTPGSYTDYQPSKGPVLGPKFSRKVVKA 2173
            ++QKKDV  E D+S+VKN+  NSRYY+LK+R ++ GS TDY  S G   G KF R++VKA
Sbjct: 1273 SYQKKDVDTELDYSQVKNTYQNSRYYMLKRRTISAGS-TDYHTS-GSSPGTKFGRRIVKA 1330

Query: 2172 VTYRVKSVPLSSKPVDKSRNESALSNPSSEPFQTSSPHEVDPAPQXXXXXSLGKSPSYKE 1993
            VTYRVKSVP S+K   K            E    S+P+++ P  Q     SLGKS SYKE
Sbjct: 1331 VTYRVKSVP-STKTATKL-----------ETGTISAPNDMSPISQKKSVVSLGKSLSYKE 1378

Query: 1992 VALAPPGTIAKMQVRNSENGTPGTSMHAVGKFEVEVNEAKETIVSANTEIEN-KEDKTES 1816
            VALAPPGTIAKMQV   +N  P      VGK EVE NE  E+  S  TE  N   ++ + 
Sbjct: 1379 VALAPPGTIAKMQVTVFQNDIPDNRQLDVGKPEVETNEPSESTDSMITEAVNINAEENKI 1438

Query: 1815 SIPDTSFHIKDKTEVVPREEDGHPHGEIGGTPSEIVSLDVGMLVPENSENQXXXXXXXXX 1636
            SI  +  ++KD+ EVV ++ +      IG  PSEIVS  V  +    +E Q         
Sbjct: 1439 SILHSKDYLKDEVEVVEKKNETQSGDAIGNIPSEIVSKSVEAVESHGAEVQEVVQGGVKM 1498

Query: 1635 XXXXXXD-APKDEQSDRESPSNAGLDRNSVTTVPG-EDVKEESLVSVSENIRDTPNKKLX 1462
                    +P +E S  E PS++  + NS + + G E++K++  V  S + R+ PNKKL 
Sbjct: 1499 DGRPNSTDSPNEELS--EDPSSSEPNENSHSALQGVENLKDKPSVLNSGDTRELPNKKLS 1556

Query: 1461 XXXXXXXXXXXXSRGAHLALNISIXXXXXXXXXXXXV--NMSFHHGNTTV----SPICSS 1300
                        +R   +A+NI++               NM+ H G   V    +P+CSS
Sbjct: 1557 ASAAPFNPSPAIARPPPVAMNITLSSGPGAVPAVSAWPLNMTLHPGPAAVLPAVNPMCSS 1616

Query: 1299 PLHHYPSPPRIPNVMHPLPFMYPPYSQGQAVQSSTFPMTSGPFHSNHIAWSCNMSSAPLE 1120
            P H YPSPP  PN+MHPLPFMYPPY+Q QA+ +S FP+TS PFH NH AW CNM+    E
Sbjct: 1617 PHHPYPSPPPTPNMMHPLPFMYPPYTQPQAIPASNFPVTSSPFHPNHFAWQCNMNPNASE 1676

Query: 1119 FVPGTVWHGCHPMESSVLPPVTEAIADPISDTPVQSENLEGMSILSTLQXXXXXXXXXXX 940
            F+PGTVW GCHPME S++PPV E I+DPI +  VQS N EG+     L            
Sbjct: 1677 FMPGTVWPGCHPMEFSIIPPVIEPISDPILEPKVQSGNSEGLISAPILPEEISNGGETIK 1736

Query: 939  XXGSPVLNLMDTGRPSAEISSENKQEL---DEATSPRGDISKVNCNNNSKENTERSRGKH 769
                     M        + SEN +E+   D  T       ++  +N+  E T       
Sbjct: 1737 EVNLLASEAMGDANIIPVVGSENGKEIAHSDPCTVESSGKEQLGHSNSPNECTG------ 1790

Query: 768  VLGHPKKLEGEGSFNILLRGKRNRKQTLRLPISLLNKPYGSQSFKLVYNRVVRGSEDPKS 589
             +   KK++GE +F+IL+RG+RNRKQTLR+PISLLN+PYGSQSFK++YNRVVRGSE PKS
Sbjct: 1791 -ISSEKKIDGEKTFSILIRGRRNRKQTLRMPISLLNRPYGSQSFKVIYNRVVRGSEVPKS 1849

Query: 588  TN 583
             +
Sbjct: 1850 NS 1851


>ref|XP_002523351.1| eukaryotic translation initiation factor 3 subunit, putative [Ricinus
            communis] gi|223537439|gb|EEF39067.1| eukaryotic
            translation initiation factor 3 subunit, putative
            [Ricinus communis]
          Length = 1872

 Score =  362 bits (929), Expect = 2e-97
 Identities = 245/614 (39%), Positives = 324/614 (52%), Gaps = 14/614 (2%)
 Frame = -3

Query: 2349 HQKKDVSVEPDHSKVKNSQPNSRYYLLKKRAVTPGSYTDYQPSKGPVLGPKFSRKVVKAV 2170
            +QKK V    D+  VKN+  N+RYYLLKKR ++ GSY D+  S  P  G KF R++VKAV
Sbjct: 1275 YQKKIVDANMDYPPVKNTHQNNRYYLLKKRPLSHGSYVDHHASN-PSQGTKFGRRIVKAV 1333

Query: 2169 TYRVKSVPLSSKPVDKSRNESALSNPSS-EPFQTSSPHEVDPAPQXXXXXSLGKSPSYKE 1993
            TYRVKS+P  +K      ++S +   SS E  Q S+    D         SLGKSPSYKE
Sbjct: 1334 TYRVKSIPSVNKTAPTENSKSGVKTFSSLESAQLSASS--DAGQVKSSVVSLGKSPSYKE 1391

Query: 1992 VALAPPGTIAKMQVRNSENGTPGTSMHAVGKFEVEVNEAKETIVSANTEIENKEDKTESS 1813
            VALAPPGTIAK QV   +N         VG  + E  EA E   +A+  +    DK  SS
Sbjct: 1392 VALAPPGTIAKFQVWLPQNDNSDNKDIGVGGSKEETIEAIE---NASEVVTVLADKDNSS 1448

Query: 1812 IPDTSFHIKDKTEVVPREEDGHPHGEIGGTPSEIVSLDVGMLVPENSENQXXXXXXXXXX 1633
              D++ H+KD T+V+  +ED   +        E  +L V     E SE+           
Sbjct: 1449 ATDSNDHLKDVTDVIEEKEDSQSNNA-----KEENALMVARKTIE-SESGIVEVHGVMQN 1502

Query: 1632 XXXXXDAP-------KDEQSDRESPSNAGLDRNSVTTVPG-EDVKEESLVSVSENIRDTP 1477
                   P       K+   +++S        NS  T P  ED+++ SL + S   R  P
Sbjct: 1503 SISIDRIPNSIDFPSKEPPFEKDSAGEFEPQCNSNPTSPEVEDLRDRSLATSSGETRGLP 1562

Query: 1476 NKKLXXXXXXXXXXXXXSRGAHLALNISIXXXXXXXXXXXXV--NMSFHHGNTTVSPICS 1303
            NKKL             +R A +++NIS+               NM+ H G  TV P  S
Sbjct: 1563 NKKLSASAAPFNPSPSIARAAPVSMNISLPPGPGSVPAVAPWPVNMTLHPGPATVLPPVS 1622

Query: 1302 ---SPLHHYPSPPRIPNVMHPLPFMYPPYSQGQAVQSSTFPMTSGPFHSNHIAWSCNMSS 1132
               SP H YPSPP  PN+M PLPF+YPPYSQ QAV +STFP+TS  FH NH +W CN++ 
Sbjct: 1623 PMPSPHHPYPSPPATPNMMQPLPFIYPPYSQSQAVPTSTFPVTSNAFHPNHFSWQCNVNH 1682

Query: 1131 APLEFVPGTVWHGCHPMESSVLPPVTEAIADPISDTPVQSENLEGMSILSTLQXXXXXXX 952
               EF+P T+W GCH ME SVLPPVTE I D   +  VQ EN    S    L        
Sbjct: 1683 RVNEFIPSTIWPGCHGMEFSVLPPVTEPIPDSALEPKVQFENPGSASPPPVLPADIVNVE 1742

Query: 951  XXXXXXGSPVLNLMDTGRPSAEISSENKQELDEATSPRGDISKVNCNNNSKENTERSRGK 772
                          D     A +  EN +E     S  G++ +++ N++S   + +  G 
Sbjct: 1743 EAKREVNLLAPEATDNANDLAGVRLENVKE--NGHSNLGEV-EISGNDSSHYKSFKKDGS 1799

Query: 771  HVLGHPKKLEGEGSFNILLRGKRNRKQTLRLPISLLNKPYGSQSFKLVYNRVVRGSEDPK 592
            +     +K++GE +F+IL+RG+RNRKQTLR+PISLLN+PYGSQSFK++YNRVVRGSE PK
Sbjct: 1800 NT--DERKIDGEKTFSILIRGRRNRKQTLRMPISLLNRPYGSQSFKVIYNRVVRGSEAPK 1857

Query: 591  STNNVFSTSNCTSN 550
            ST    S  +CT++
Sbjct: 1858 ST-CFPSAKDCTAS 1870


>ref|XP_002320200.1| predicted protein [Populus trichocarpa] gi|222860973|gb|EEE98515.1|
            predicted protein [Populus trichocarpa]
          Length = 717

 Score =  330 bits (846), Expect = 1e-87
 Identities = 239/615 (38%), Positives = 318/615 (51%), Gaps = 25/615 (4%)
 Frame = -3

Query: 2352 NHQKKDVSVEPDHSKVKNSQPNSRYYLLKKRAVTPGSYTDYQPSKGPVLGPKFSRKVVKA 2173
            ++ KK V    D++ VKN+  NS+YYLLKKRA + GSY D+Q +  P    KF R++VKA
Sbjct: 116  SYHKKIVDANMDYAPVKNAHQNSKYYLLKKRAPSHGSYGDHQTTNLPP-SAKFGRRMVKA 174

Query: 2172 VTYRVKSVPLSSKPVDKSR---NESALSNPSSEPFQTSSPHEVDPAPQXXXXXSLGKSPS 2002
            VTYRVKSVP S K            AL++  S P   S+P+++ P+        LGKS S
Sbjct: 175  VTYRVKSVPSSYKTSTTENPRIGNKALTSSESAP--VSAPNDIRPSKNSIVS--LGKSLS 230

Query: 2001 YKEVALAPPGTIAKMQVRNSENGTPGTSMHAVGKFEVEVNEAKETIVSANTEIENKE-DK 1825
            YKEVALAPPGTIAK+Q    ++          GK E E NEAK    S    +E +  +K
Sbjct: 231  YKEVALAPPGTIAKLQAWFPQSDNSDNQEIGDGKLE-ETNEAKAIAGSVVMGVEERSGEK 289

Query: 1824 TESSIPDTSFHIKDKTEVVPREEDGHPHGEIGGTPSEIVSLDV------GMLVPENSENQ 1663
             E+S  D +  +K +   V + E+ H    +    S +VS  V       + V E  +N 
Sbjct: 290  DENSESDDTDDLKKEIVGVHKMEEQHSTHVLEENSSLMVSQSVQGHESGDIEVHEIIQN- 348

Query: 1662 XXXXXXXXXXXXXXXDAPKD-EQSDRESPSNAGLDRNSVTTVPG-EDVKEESLVSVSENI 1489
                             PK+  + D  S  +  +D NS  T+PG ED+K++ L+  S + 
Sbjct: 349  ---GMLIDQIPNSIDSLPKEPHEKDSSSEFDPQVDLNS--TLPGAEDLKDKPLILNSGDA 403

Query: 1488 RDTPNKKLXXXXXXXXXXXXXSRGAHLALNISIXXXXXXXXXXXXV--NMSFHHGNTTV- 1318
            +  PNKKL              R   +A+NI +               NM+ H G  TV 
Sbjct: 404  QGLPNKKLSASAAPFNPSTSIGRAPPVAINIPLPSAPGAVPAVAPWPVNMTLHPGPATVI 463

Query: 1317 SPI--CSSPLHHYPSP--PRIPNVMHPLPFMYPPYSQGQAVQSSTFPMTSGPFHSNHIAW 1150
             PI   SSP H YP P  P  PN++ PLPFMYPPYSQ  AV +STFP+TS  FH NH +W
Sbjct: 464  RPINPMSSPHHPYPYPSQPPTPNMIQPLPFMYPPYSQ--AVPTSTFPVTSSAFHPNHFSW 521

Query: 1149 SCNMSSAPLEFVPGTVWHGCHPMESSVLPPVTEAIADPISDTPVQSENLEGMSILSTLQX 970
             CN S    EF+P TVW GC  +E SVLPPV E IADP+ +   Q EN E  S L  L  
Sbjct: 522  QCNASPNVSEFIPTTVWPGCLAVEFSVLPPVVEPIADPLLEPKAQFENSESPSPLPILS- 580

Query: 969  XXXXXXXXXXXXGSPVLNLMDTGRPSAEISSENKQELDEA------TSPRGDISKVNCNN 808
                           +    D   P A   ++N +EL  A       +   + S+     
Sbjct: 581  ----------VDSDNIGETNDEANPQASDRNDNVKELTGAGLENIKENGHSNPSEAEIYR 630

Query: 807  NSKENTERSRGKHVLGHPKKLEGEGSFNILLRGKRNRKQTLRLPISLLNKPYGSQSFKLV 628
            N     + S+        +++  E +F+ILLRGKRNRKQTLR+P+SLL++PYGSQSFK++
Sbjct: 631  NDSSQEKGSQENVTSSIDQQINEEKTFSILLRGKRNRKQTLRMPMSLLSRPYGSQSFKVI 690

Query: 627  YNRVVRGSEDPKSTN 583
            YNRVVRGSE PKST+
Sbjct: 691  YNRVVRGSESPKSTS 705


>ref|XP_003548395.1| PREDICTED: protein TIF31 homolog [Glycine max]
          Length = 1846

 Score =  323 bits (829), Expect = 1e-85
 Identities = 230/630 (36%), Positives = 325/630 (51%), Gaps = 34/630 (5%)
 Frame = -3

Query: 2340 KDVSVEPDHSKVKNSQPNSRYYLLKKRAVTPGSYTDYQPSKGPVLGPKFSRKVVKAVTYR 2161
            K+V V  +   V++  PNSRYY LKKR ++ GSYTD   +     G KF RKVVKAVTYR
Sbjct: 1261 KNVEVGTESPFVRSPNPNSRYYFLKKRTISHGSYTD-DHTTNITQGNKFGRKVVKAVTYR 1319

Query: 2160 VKSVPLSSKPVDKSRNESALSNPSSEPFQTSSPHEVDPAPQXXXXXSLGKSPSYKEVALA 1981
            VKS+P +SKP      E+     SS P     P  +D  P      SLGKSPSYKEVALA
Sbjct: 1320 VKSMPSTSKPCANETLENGDKLLSSLP----EPDPIDANPVKNSKVSLGKSPSYKEVALA 1375

Query: 1980 PPGTIAKMQVRNSENGTPGTSMHAVGKFEVEVN-----EAKETIVSANTEIENK-----E 1831
            PPGTI+K QV N ++    +S H  GK E EV      +   T++  N  ++ K      
Sbjct: 1376 PPGTISKFQVYNPQSEISVSSEHDSGKHEEEVEANRNVDVDPTLIEVNDTVKEKNNDSLS 1435

Query: 1830 DKTESSIPDTSFHI--KDKTEVVPREEDG--HPHGEIGGTPSEIVSLDVGMLVPENSENQ 1663
            D  + S+ DT   I  K++TE++   +D      G+ G   ++  ++D  +L+    ++ 
Sbjct: 1436 DSVDDSLDDTGVAIEGKEETELIVAVQDNCMSAEGQSGDVKAQ-GAVDSSILIHAVDDH- 1493

Query: 1662 XXXXXXXXXXXXXXXDAPKDEQSDRESPSNAGLDRNSVTTVP----GEDVKEESLVSVSE 1495
                                 + + ++ +++G    S  T P    GED++    VS S 
Sbjct: 1494 -----------------VDSYKQELDTSNSSGSLEPSANTNPISQGGEDLRVN--VSPSS 1534

Query: 1494 NIR--DTPNKKLXXXXXXXXXXXXXSRGAHLALNISI--XXXXXXXXXXXXVNMSFHHGN 1327
             IR    P KKL             +R A +A+N+++              VNM+ H G 
Sbjct: 1535 QIRTGGIPYKKLSASAAPFNPSPAIARAAPIAMNMTLPSGPRAVPAIGPWPVNMNVHPGP 1594

Query: 1326 TT----VSPICSSPLHHYPSPPRIPNVMHPLPFMYPPYSQGQAVQSSTFPMTSGPFHSNH 1159
            TT    V+P+CSSP H YPSPP  PN+M PLPFMYPP++Q Q+V  S FP+T+  FH+NH
Sbjct: 1595 TTVLPAVAPMCSSPHHAYPSPPTTPNMMQPLPFMYPPFTQPQSVSPSNFPVTNSAFHANH 1654

Query: 1158 IAWSCNMSSAPLEFVPGTVWHGCHPMESSVLPPVTEAIADPISDTPVQSENLEGMSILST 979
              +   ++    +F P  VW GCHP+E  +  P+ E I DPIS++      LE  S  S 
Sbjct: 1655 FTY---LNPTISKFGPSAVWPGCHPVEFPLPVPIVEPIPDPISESQALCHGLESPSSASV 1711

Query: 978  LQXXXXXXXXXXXXXGSPVLNLMDTGRPSAEISSENKQELDEATSPRGDISKVNCNNN-- 805
            L                 + N+ D+ +    +SSE  +  DEA     +  K N N N  
Sbjct: 1712 L--------------PEDIDNIGDSNQVVKTLSSEISE--DEAVRSGSESIKENGNMNFH 1755

Query: 804  SKENTERSRGKHVLGHPK------KLEGEGSFNILLRGKRNRKQTLRLPISLLNKPYGSQ 643
              EN    + +++  +         ++GE +F+IL RG+RNRKQTLR+PISLL +P GSQ
Sbjct: 1756 GSENAGNKQHQNIASNGNSSSSGTNMDGEKTFSILFRGRRNRKQTLRMPISLLTRPNGSQ 1815

Query: 642  SFKLVYNRVVRGSEDPKSTNNVFSTSNCTS 553
            SFK++YNRVVRGS  PKS  N+ S+ +CT+
Sbjct: 1816 SFKVIYNRVVRGSHAPKSM-NLSSSKDCTA 1844


>ref|XP_003528792.1| PREDICTED: uncharacterized protein LOC100808136 [Glycine max]
          Length = 1840

 Score =  312 bits (800), Expect = 2e-82
 Identities = 222/626 (35%), Positives = 316/626 (50%), Gaps = 29/626 (4%)
 Frame = -3

Query: 2343 KKDVSVEPDHSKVKNSQPNSRYYLLKKRAVTPGSYTDYQPSKGPVLGPKFSRKVVKAVTY 2164
            +K+V V  +   V++  P+SRYY LKKR ++ GSYTD   +     G KF RKVVKAVTY
Sbjct: 1253 QKNVEVGSESPFVRSPNPSSRYYFLKKRTISHGSYTD-DHTVNITQGTKFGRKVVKAVTY 1311

Query: 2163 RVKSVPLSSKPVDKSRNESALSNPSSEPFQTSSPHEVDPAPQXXXXXSLGKSPSYKEVAL 1984
            RVKSVP +SKP    + E+     SS P     P   D  P      SLGKSPSYKEVAL
Sbjct: 1312 RVKSVPSTSKPCVNEKLENGDKLLSSLP----EPDPTDANPVKKSIVSLGKSPSYKEVAL 1367

Query: 1983 APPGTIAKMQVRNSENGTPGTSMHAVGKFEVEVNEAKETI------VSANTEIENKEDKT 1822
            APPGTI+K QV N ++    +S H  GK E E  EA   +         N  ++ K D +
Sbjct: 1368 APPGTISKFQVYNPQSVISVSSEHDGGKHEEEDIEADRNVNVDPTPTEVNDMVKEKNDDS 1427

Query: 1821 -----ESSIPDTSFHI--KDKTEVVPREEDG--HPHGEIGGTPSEIVSLDVGMLVPENSE 1669
                 + S  DT   I  K++T+++   +D      G+ G   ++  ++D  +L+    +
Sbjct: 1428 LSDSVDDSQDDTGVAIEGKEETQLIVAVQDNCMSAEGQSGDVEAQ-GAVDNSILIHAVDD 1486

Query: 1668 NQXXXXXXXXXXXXXXXDAPKDEQSDRESPSNAGLDRNSVTTVPGEDVKEESLVSVSENI 1489
            +                 + ++  +   S S    D  + T+  GED+K     S   + 
Sbjct: 1487 H--------------VDSSKQELDASNSSASLEPSDNTNPTSQGGEDLKVNVSPSSQSHT 1532

Query: 1488 RDTPNKKLXXXXXXXXXXXXXSRGAHLALNISIXXXXXXXXXXXXV--NMSFHHGNTTV- 1318
               P KKL             +R A +A+N+++               NM+ H G TTV 
Sbjct: 1533 GGIPYKKLSASAAPFNPSPAIARAAPIAMNMTLPSGPSAVPAIGPWPVNMNVHPGPTTVL 1592

Query: 1317 ---SPICSSPLHHYPSPPRIPNVMHPLPFMYPPYSQGQAVQSSTFPMTSGPFHSNHIAWS 1147
               +P+CSSP H YPSPP  PN+M PLPF+YPP++Q Q+V  S +P+TS  FH+NH  + 
Sbjct: 1593 PTVAPMCSSPHHAYPSPPATPNMMQPLPFVYPPFTQPQSVAPSNYPVTSSAFHANHFTY- 1651

Query: 1146 CNMSSAPLEFVPGTVWHGCHPMESSVLPPVTEAIADPISDTPVQSENLEGMSILSTLQXX 967
              ++    +F P  VW GCHP+E  +  P+ E I DPIS++ V     E  S  S L   
Sbjct: 1652 --LNPTISKFGPSAVWPGCHPVEFPLPVPIVEPIRDPISESQVLCHGSESPSSASVL--- 1706

Query: 966  XXXXXXXXXXXGSPVLNLMDTGRPSAEISSENKQELDEATSPRGDISKVNCNNN------ 805
                          + ++ D+ +    +SSE  +  DEA     +  K N N N      
Sbjct: 1707 -----------PEDIDSIGDSNQGVKTLSSEISE--DEAVRAGSENIKENGNMNFHGSEN 1753

Query: 804  --SKENTERSRGKHVLGHPKKLEGEGSFNILLRGKRNRKQTLRLPISLLNKPYGSQSFKL 631
              +K+N               ++GE +F+IL+RG+RNRKQTLR+PISLL +P GSQSFK+
Sbjct: 1754 AGNKQNQNFGSNGSSSSSETNMDGEKTFSILIRGRRNRKQTLRMPISLLTRPNGSQSFKV 1813

Query: 630  VYNRVVRGSEDPKSTNNVFSTSNCTS 553
            +YNRVVRGS   KS  N+ S+ +CT+
Sbjct: 1814 IYNRVVRGSHATKSM-NLSSSKDCTA 1838