BLASTX nr result

ID: Coptis23_contig00011612 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00011612
         (218 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21479.3| unnamed protein product [Vitis vinifera]               95   5e-18
ref|XP_002276585.1| PREDICTED: DAZ-associated protein 1-like [Vi...    95   5e-18
gb|ABK24718.1| unknown [Picea sitchensis] gi|148910800|gb|ABR184...    90   2e-16
ref|XP_002306336.1| predicted protein [Populus trichocarpa] gi|2...    89   4e-16
ref|NP_001054022.1| Os04g0636900 [Oryza sativa Japonica Group] g...    86   4e-15

>emb|CBI21479.3| unnamed protein product [Vitis vinifera]
          Length = 373

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 45/62 (72%), Positives = 50/62 (80%)
 Frame = +1

Query: 31  QDPMGRKIYVSNVNVDVDAEKLRLFFGKYGEIENGPMGFDMVTGKSRGFALFLYKTVEGA 210
           QD +GRKIYVSNV  DVD E+LR FF K+GEIE GP+GFD  TGKSRGFALF+YK  E A
Sbjct: 192 QDTVGRKIYVSNVQADVDPERLRSFFAKFGEIETGPIGFDTQTGKSRGFALFVYKNQESA 251

Query: 211 RK 216
           RK
Sbjct: 252 RK 253


>ref|XP_002276585.1| PREDICTED: DAZ-associated protein 1-like [Vitis vinifera]
          Length = 396

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 45/62 (72%), Positives = 50/62 (80%)
 Frame = +1

Query: 31  QDPMGRKIYVSNVNVDVDAEKLRLFFGKYGEIENGPMGFDMVTGKSRGFALFLYKTVEGA 210
           QD +GRKIYVSNV  DVD E+LR FF K+GEIE GP+GFD  TGKSRGFALF+YK  E A
Sbjct: 178 QDTVGRKIYVSNVQADVDPERLRSFFAKFGEIETGPIGFDTQTGKSRGFALFVYKNQESA 237

Query: 211 RK 216
           RK
Sbjct: 238 RK 239


>gb|ABK24718.1| unknown [Picea sitchensis] gi|148910800|gb|ABR18466.1| unknown
           [Picea sitchensis]
          Length = 442

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 41/58 (70%), Positives = 48/58 (82%)
 Frame = +1

Query: 43  GRKIYVSNVNVDVDAEKLRLFFGKYGEIENGPMGFDMVTGKSRGFALFLYKTVEGARK 216
           GRKIYVSNV+ D+ AEKL  FF KYGE+E GP+GFD  TG+SRGFALF+YK  EGA+K
Sbjct: 181 GRKIYVSNVSADIPAEKLLNFFSKYGEVEEGPLGFDKHTGRSRGFALFVYKNAEGAKK 238


>ref|XP_002306336.1| predicted protein [Populus trichocarpa] gi|222855785|gb|EEE93332.1|
           predicted protein [Populus trichocarpa]
          Length = 397

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 42/57 (73%), Positives = 48/57 (84%)
 Frame = +1

Query: 46  RKIYVSNVNVDVDAEKLRLFFGKYGEIENGPMGFDMVTGKSRGFALFLYKTVEGARK 216
           RKI+VSNV +  D EKLR FF K+GEIENGP+GFD  TGKSRG+ALF+YKTVEGA K
Sbjct: 182 RKIFVSNVGMSTDKEKLRAFFEKFGEIENGPIGFDKETGKSRGYALFVYKTVEGAIK 238


>ref|NP_001054022.1| Os04g0636900 [Oryza sativa Japonica Group]
           gi|21741248|emb|CAD41732.1| OSJNBb0034I13.9 [Oryza
           sativa Japonica Group] gi|113565593|dbj|BAF15936.1|
           Os04g0636900 [Oryza sativa Japonica Group]
           gi|215715302|dbj|BAG95053.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215764985|dbj|BAG86682.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 515

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 39/72 (54%), Positives = 53/72 (73%)
 Frame = +1

Query: 1   SNSNSNSQVYQDPMGRKIYVSNVNVDVDAEKLRLFFGKYGEIENGPMGFDMVTGKSRGFA 180
           +N+ S S    D M RKI+V NV+ DVD ++L  +F ++GEIE GP+GFD  TGK +GFA
Sbjct: 215 NNAGSASSSQPDNMQRKIFVGNVHADVDVDRLYEYFSQFGEIEEGPLGFDKTTGKPKGFA 274

Query: 181 LFLYKTVEGARK 216
           LF+YK+VE AR+
Sbjct: 275 LFVYKSVESARR 286


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