BLASTX nr result

ID: Coptis23_contig00011611 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00011611
         (759 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAG75112.1| transcription factor MYB828, partial [Fagus cren...   134   2e-29
gb|ABW34392.1| R2R3 Myb14 transcription factor [Vitis vinifera]       133   5e-29
emb|CBI37114.3| unnamed protein product [Vitis vinifera]              132   8e-29
ref|XP_002278783.1| PREDICTED: myb-related protein Myb4 [Vitis v...   132   8e-29
ref|XP_002306849.1| predicted protein [Populus trichocarpa] gi|2...   131   1e-28

>dbj|BAG75112.1| transcription factor MYB828, partial [Fagus crenata]
          Length = 243

 Score =  134 bits (338), Expect = 2e-29
 Identities = 69/120 (57%), Positives = 77/120 (64%)
 Frame = +2

Query: 2   CGKSCRLRWTNYLRPDIKRGNFSNEEEETIIKLHEMLGNRWSAIAGRLPGXXXXXXXXXX 181
           CGKSCRLRWTNYLRPDIKRGNFS EEEE II+LHEMLGNRWSAIA RLPG          
Sbjct: 29  CGKSCRLRWTNYLRPDIKRGNFSREEEENIIQLHEMLGNRWSAIAARLPG---------- 78

Query: 182 XXXXXXXXXXXXXXXXXXXXXTDNEIKNVWHTHLKKRAKKNEANRETKQYSAEASKCETN 361
                                TDNEIKNVWHTHLKKR K+ E+NRE    + + + C++N
Sbjct: 79  --------------------RTDNEIKNVWHTHLKKRLKQRESNRE---INLQVTNCDSN 115


>gb|ABW34392.1| R2R3 Myb14 transcription factor [Vitis vinifera]
          Length = 272

 Score =  133 bits (334), Expect = 5e-29
 Identities = 68/118 (57%), Positives = 76/118 (64%)
 Frame = +2

Query: 2   CGKSCRLRWTNYLRPDIKRGNFSNEEEETIIKLHEMLGNRWSAIAGRLPGXXXXXXXXXX 181
           CGKSCRLRWTNYLRPDIKRGNF++EEEETII+LHE LGNRWSAIA +LPG          
Sbjct: 49  CGKSCRLRWTNYLRPDIKRGNFTSEEEETIIELHERLGNRWSAIAAKLPG---------- 98

Query: 182 XXXXXXXXXXXXXXXXXXXXXTDNEIKNVWHTHLKKRAKKNEANRETKQYSAEASKCE 355
                                TDNEIKNVWHTHLKKR K N A    K++S +AS+ E
Sbjct: 99  --------------------RTDNEIKNVWHTHLKKRLKHNHATPPPKRHSLDASQVE 136


>emb|CBI37114.3| unnamed protein product [Vitis vinifera]
          Length = 233

 Score =  132 bits (332), Expect = 8e-29
 Identities = 68/118 (57%), Positives = 75/118 (63%)
 Frame = +2

Query: 2   CGKSCRLRWTNYLRPDIKRGNFSNEEEETIIKLHEMLGNRWSAIAGRLPGXXXXXXXXXX 181
           CGKSCRLRWTNYLRPDIKRGNF++EEEETII+LHE LGNRWSAIA +LPG          
Sbjct: 49  CGKSCRLRWTNYLRPDIKRGNFTSEEEETIIELHERLGNRWSAIAAKLPG---------- 98

Query: 182 XXXXXXXXXXXXXXXXXXXXXTDNEIKNVWHTHLKKRAKKNEANRETKQYSAEASKCE 355
                                TDNEIKNVWHTHLKKR K N A    K++S +AS  E
Sbjct: 99  --------------------RTDNEIKNVWHTHLKKRLKHNHATPPPKRHSLDASHVE 136


>ref|XP_002278783.1| PREDICTED: myb-related protein Myb4 [Vitis vinifera]
          Length = 269

 Score =  132 bits (332), Expect = 8e-29
 Identities = 68/118 (57%), Positives = 75/118 (63%)
 Frame = +2

Query: 2   CGKSCRLRWTNYLRPDIKRGNFSNEEEETIIKLHEMLGNRWSAIAGRLPGXXXXXXXXXX 181
           CGKSCRLRWTNYLRPDIKRGNF++EEEETII+LHE LGNRWSAIA +LPG          
Sbjct: 49  CGKSCRLRWTNYLRPDIKRGNFTSEEEETIIELHERLGNRWSAIAAKLPG---------- 98

Query: 182 XXXXXXXXXXXXXXXXXXXXXTDNEIKNVWHTHLKKRAKKNEANRETKQYSAEASKCE 355
                                TDNEIKNVWHTHLKKR K N A    K++S +AS  E
Sbjct: 99  --------------------RTDNEIKNVWHTHLKKRLKHNHATPPPKRHSLDASHVE 136


>ref|XP_002306849.1| predicted protein [Populus trichocarpa] gi|222856298|gb|EEE93845.1|
           predicted protein [Populus trichocarpa]
          Length = 264

 Score =  131 bits (330), Expect = 1e-28
 Identities = 68/116 (58%), Positives = 72/116 (62%)
 Frame = +2

Query: 2   CGKSCRLRWTNYLRPDIKRGNFSNEEEETIIKLHEMLGNRWSAIAGRLPGXXXXXXXXXX 181
           CGKSCRLRW NYLRPDIKRGNFS EEE+TIIKLHEMLGNRWSAIA RLPG          
Sbjct: 40  CGKSCRLRWINYLRPDIKRGNFSREEEDTIIKLHEMLGNRWSAIAARLPG---------- 89

Query: 182 XXXXXXXXXXXXXXXXXXXXXTDNEIKNVWHTHLKKRAKKNEANRETKQYSAEASK 349
                                TDNEIKNVWHTHLKKR +KN    E K  S + S+
Sbjct: 90  --------------------RTDNEIKNVWHTHLKKRLEKNHVTPEIKGRSVDISR 125


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