BLASTX nr result

ID: Coptis23_contig00011610 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00011610
         (1220 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA88222.1| myb-related transcription factor LBM2 [Nicotiana...   266   6e-69
emb|CAA78387.1| protein 2 [Petunia x hybrida]                         264   3e-68
dbj|BAA88224.1| myb-related transcription factor LBM4 [Nicotiana...   262   1e-67
dbj|BAA88221.1| myb-related transcription factor LBM1 [Nicotiana...   259   1e-66
gb|ABU53925.1| myb-related transcription factor [Datura metel]        258   2e-66

>dbj|BAA88222.1| myb-related transcription factor LBM2 [Nicotiana tabacum]
          Length = 277

 Score =  266 bits (681), Expect = 6e-69
 Identities = 145/281 (51%), Positives = 182/281 (64%), Gaps = 10/281 (3%)
 Frame = +1

Query: 58  MGRAPCCEKMGLKRGPWSPEEDHLLIAYIGKNGHGNWRALPKQAGLLRCGKSCRLRWTNY 237
           MGRAPCCEKMGLK+GPW+PEED +LI++I +NGHGNWRALPKQAGLLRCGKSCRLRWTNY
Sbjct: 1   MGRAPCCEKMGLKKGPWTPEEDQILISFIQQNGHGNWRALPKQAGLLRCGKSCRLRWTNY 60

Query: 238 LRPDIKRGNFTREEEDSIINLHEMLGNRWSTIAASLPGRTDNEIKNVWHTHLKKRLKPSE 417
           LRPDIKRGNFT+EEED+II LHEMLGNRWS IAA LPGRTDNEIKNVWHTHLKK+LK  +
Sbjct: 61  LRPDIKRGNFTKEEEDTIIQLHEMLGNRWSAIAAKLPGRTDNEIKNVWHTHLKKKLKDYK 120

Query: 418 VTPDTNLHLIKSEANLXXXXXXXXXXXXITFSSPQRFENXXXXXXXXXXXXXXXXXGTE- 594
              +   H  K+  +             +TF   Q+                     TE 
Sbjct: 121 PPQNPKRH-SKNHDSKGPTTSESSNNSHLTFIYTQK---HIIDSSVPAPNSPQISSSTEM 176

Query: 595 SAIT-GENTKISIKEECTNSWETLPHTDESLWSN-VMTMEHFSTMEE--FSTIDINSEVQ 762
           S +T  ++ ++ IK+E   S E  P  DES W++ + T  ++S   +    T D   +VQ
Sbjct: 177 STVTLVDDHQMVIKQEEMESSEYFPEIDESFWTDKLSTDNNWSNTHDHVMVTADQELQVQ 236

Query: 763 LPLSSVSSQ-----TSAIDYGDEFWYNLFTKTEALSDLPEF 870
           LP SS+  +     T+ ++   +FWYN+F KT+ L +LPEF
Sbjct: 237 LPFSSLKEENVDMLTTKMEDDMDFWYNVFIKTDDLPELPEF 277


>emb|CAA78387.1| protein 2 [Petunia x hybrida]
          Length = 280

 Score =  264 bits (675), Expect = 3e-68
 Identities = 144/286 (50%), Positives = 174/286 (60%), Gaps = 15/286 (5%)
 Frame = +1

Query: 58  MGRAPCCEKMGLKRGPWSPEEDHLLIAYIGKNGHGNWRALPKQAGLLRCGKSCRLRWTNY 237
           MGRAPCCEKMGLK+GPW+PEED +L++YI KNGHGNWRALPK AGLLRCGKSCRLRWTNY
Sbjct: 1   MGRAPCCEKMGLKKGPWTPEEDQILVSYIEKNGHGNWRALPKLAGLLRCGKSCRLRWTNY 60

Query: 238 LRPDIKRGNFTREEEDSIINLHEMLGNRWSTIAASLPGRTDNEIKNVWHTHLKKRLKPSE 417
           LRPDIKRGNFTREEED+II LHEMLGNRWS IAA LPGRTDNEIKNVWHTHLKKRLK  +
Sbjct: 61  LRPDIKRGNFTREEEDTIIQLHEMLGNRWSAIAARLPGRTDNEIKNVWHTHLKKRLKNYQ 120

Query: 418 VTPDTNLHLIKSEANLXXXXXXXXXXXXITFSSPQRFENXXXXXXXXXXXXXXXXXGTES 597
              ++  H  K+  +              +FS+ Q   N                    S
Sbjct: 121 PPQNSKRH-SKNNHDSKAPSTSKMLDNSESFSTIQENIN----EPMTGPNSPQRSSSESS 175

Query: 598 AITGENTKIS---------IKEECTNSWETLPHTDESLWSNVMTMEHFSTMEEFSTIDIN 750
            +T ++   +         IK E  +S+E  P  DES W+  ++M     + +       
Sbjct: 176 TVTADSLAATDVTNDDQTFIKHEEMDSYENFPEIDESFWTEDLSMGDNLDL-DMEVAGEK 234

Query: 751 SEVQLPLS------SVSSQTSAIDYGDEFWYNLFTKTEALSDLPEF 870
           S+VQ P S      SV    + ++   +FWYN+F K E L DLPEF
Sbjct: 235 SQVQFPYSHDMKEQSVDMVGAKLEDDMDFWYNVFIKAEDLLDLPEF 280


>dbj|BAA88224.1| myb-related transcription factor LBM4 [Nicotiana tabacum]
          Length = 281

 Score =  262 bits (669), Expect = 1e-67
 Identities = 143/289 (49%), Positives = 177/289 (61%), Gaps = 18/289 (6%)
 Frame = +1

Query: 58  MGRAPCCEKMGLKRGPWSPEEDHLLIAYIGKNGHGNWRALPKQAGLLRCGKSCRLRWTNY 237
           M RAPCCEKMGLK+GPW+PEED +L++YI  NGHGNWRALPK AGLLRCGKSCRLRWTNY
Sbjct: 1   MVRAPCCEKMGLKKGPWTPEEDQVLVSYIQTNGHGNWRALPKLAGLLRCGKSCRLRWTNY 60

Query: 238 LRPDIKRGNFTREEEDSIINLHEMLGNRWSTIAASLPGRTDNEIKNVWHTHLKKRLKPSE 417
           LRPDIKRGNFTREEEDSII LHEMLGNRWS IAA LPGRTDNEIKNVWHTHLKKRLK  +
Sbjct: 61  LRPDIKRGNFTREEEDSIIQLHEMLGNRWSAIAARLPGRTDNEIKNVWHTHLKKRLKNYQ 120

Query: 418 VTPDTNLHLIKSEANLXXXXXXXXXXXXITFSSPQRFENXXXXXXXXXXXXXXXXXGTE- 594
              ++  H   S+ NL             TF++   F N                  +  
Sbjct: 121 PPQNSKKH---SKNNLDSKAPSTSQ----TFNNSDNFSNIQEDINGPVTGPNSPQRSSSE 173

Query: 595 -SAITGENTKISI-----------KEECTNSWETLPHTDESLWSNVMTMEHFSTMEEFST 738
            S +T ++T ++             +E  +S   +P  DES W+N ++    S  +   T
Sbjct: 174 MSTVTADSTAMTTITIDDQNMFKQLDEMNSSESFIPEIDESFWTNDLSTGDNSNFDMEGT 233

Query: 739 IDINSEVQLPLSSVSSQT-----SAIDYGDEFWYNLFTKTEALSDLPEF 870
            +   +VQ P SSV  ++     + ++   +FWYN+F K+  L DLPEF
Sbjct: 234 GE-ELQVQFPFSSVKQESMDMVGTKLEDDMDFWYNVFIKSGDLLDLPEF 281


>dbj|BAA88221.1| myb-related transcription factor LBM1 [Nicotiana tabacum]
          Length = 281

 Score =  259 bits (661), Expect = 1e-66
 Identities = 143/289 (49%), Positives = 176/289 (60%), Gaps = 18/289 (6%)
 Frame = +1

Query: 58  MGRAPCCEKMGLKRGPWSPEEDHLLIAYIGKNGHGNWRALPKQAGLLRCGKSCRLRWTNY 237
           M RAPCCEKMGLK+GPW+PEED +L++YI  NGHGNWRALPK AGLLRCGKSCRLRWTNY
Sbjct: 1   MVRAPCCEKMGLKKGPWTPEEDQILVSYIQTNGHGNWRALPKLAGLLRCGKSCRLRWTNY 60

Query: 238 LRPDIKRGNFTREEEDSIINLHEMLGNRWSTIAASLPGRTDNEIKNVWHTHLKKRLKPSE 417
           LRPDIKRGNFTREEEDSII LHEMLGNRWS IAA LPGRTDNEIKNVWHTHLKKRLK  +
Sbjct: 61  LRPDIKRGNFTREEEDSIIQLHEMLGNRWSAIAARLPGRTDNEIKNVWHTHLKKRLKNYQ 120

Query: 418 VTPDTNLHLIKSEANLXXXXXXXXXXXXITFSSPQRFENXXXXXXXXXXXXXXXXXGTE- 594
              ++  H   S+ NL             TF++   F N                  +  
Sbjct: 121 PPQNSKRH---SKNNLDSKAPSTSQ----TFNNSDNFSNIQEDINGPVTGPNSPQRSSSE 173

Query: 595 -SAITGENTKISI-----------KEECTNSWETLPHTDESLWSNVMTMEHFSTMEEFST 738
            S +T ++T ++             +E  +S   +P  DES W++ ++    ST     T
Sbjct: 174 MSTVTVDSTAMTTITIDDQNMFKQLDEMDSSENFIPEIDESFWTDDLSTSDNSTFGMEGT 233

Query: 739 IDINSEVQLPLSSVSSQT-----SAIDYGDEFWYNLFTKTEALSDLPEF 870
                +VQ P SSV  ++     + ++   +FWYN+F K+  L DLPEF
Sbjct: 234 -GGELQVQFPFSSVKQESMDMVGAKLEDDMDFWYNVFIKSGDLLDLPEF 281


>gb|ABU53925.1| myb-related transcription factor [Datura metel]
          Length = 278

 Score =  258 bits (659), Expect = 2e-66
 Identities = 138/284 (48%), Positives = 167/284 (58%), Gaps = 13/284 (4%)
 Frame = +1

Query: 58  MGRAPCCEKMGLKRGPWSPEEDHLLIAYIGKNGHGNWRALPKQAGLLRCGKSCRLRWTNY 237
           MGRAPCCEKMGLK+GPW+PEED +LI+YI  NGHGNWRALPK AGLL+CGKSCRLRWTNY
Sbjct: 1   MGRAPCCEKMGLKKGPWTPEEDQILISYIQSNGHGNWRALPKLAGLLKCGKSCRLRWTNY 60

Query: 238 LRPDIKRGNFTREEEDSIINLHEMLGNRWSTIAASLPGRTDNEIKNVWHTHLKKRLKPSE 417
           LRPDIKRGNFTREEEDSII LHEMLGNRWS IAA LPGRTDNEIKNVWHTHLKKRLK  +
Sbjct: 61  LRPDIKRGNFTREEEDSIIQLHEMLGNRWSAIAARLPGRTDNEIKNVWHTHLKKRLKNYQ 120

Query: 418 VTPDTNLHLIKSEANLXXXXXXXXXXXXITFSSPQRFENXXXXXXXXXXXXXXXXXGTES 597
             P T+    K+  +             I   S   F N                  +  
Sbjct: 121 -PPQTSKRHCKNNND-----SKAPSTSQIALKSSHNFSNIQEDINGPGPGPNSPQRSSSE 174

Query: 598 AITGENTKISIKEECTN-------SWETLPHTDESLWSNVMTMEHFSTMEEFSTIDINSE 756
             T     +++    TN       S   +P  DES W++ ++    S      +     +
Sbjct: 175 MSTVTADSLAVTMGITNGGGHMDSSENFIPEIDESFWTDDLSTADNSNFNMVGSGGEELQ 234

Query: 757 VQLPLSSVSSQTSAIDYGD------EFWYNLFTKTEALSDLPEF 870
           VQ P  ++  ++  +D G       +FWYN+F K+  L +LPEF
Sbjct: 235 VQFPFHAMKQESVEMDVGAKLEDDMDFWYNVFIKSGDLLELPEF 278


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