BLASTX nr result

ID: Coptis23_contig00011609 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00011609
         (1156 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279131.1| PREDICTED: uncharacterized protein LOC100255...   170   5e-40
ref|XP_004148501.1| PREDICTED: dnaJ homolog subfamily C member 2...   169   2e-39
emb|CBI35235.3| unnamed protein product [Vitis vinifera]              166   1e-38
ref|XP_002528771.1| DNA binding protein, putative [Ricinus commu...   164   5e-38
gb|AFK36125.1| unknown [Medicago truncatula]                          163   9e-38

>ref|XP_002279131.1| PREDICTED: uncharacterized protein LOC100255727 [Vitis vinifera]
          Length = 299

 Score =  170 bits (431), Expect = 5e-40
 Identities = 86/148 (58%), Positives = 106/148 (71%)
 Frame = -2

Query: 693 EEKEWTDGDFDMLKKQIGKYPIGTVRRWEMIAQVFKGRHGVESVIKMGKSWNEKKPGGGD 514
           EE EW DGD ++LKKQ+ K+P+G   RWE +A+ F+GRHGVESVI+  KS  E+K    D
Sbjct: 152 EESEWVDGDVEILKKQLLKHPVGMPGRWEAVAEAFRGRHGVESVIRKAKSLGERKSSDSD 211

Query: 513 SFTQFLKQRKPLDKRMXXXXXXXXXXXXXXXXXXXDIALLNALKAFPKDVSMRWEKIAAA 334
           SF +FLK RKP+DKR+                   DIALLNALKAFPKDV MRWEKIAAA
Sbjct: 212 SFNRFLKDRKPVDKRV-EDGMAMENDEKEGWSSGEDIALLNALKAFPKDVPMRWEKIAAA 270

Query: 333 VPSKTKASCVKRVAELKKGFRSSKASVE 250
           VP ++KA+C+KR +ELKKGFR+SKA+ E
Sbjct: 271 VPGRSKAACMKRFSELKKGFRNSKAAAE 298


>ref|XP_004148501.1| PREDICTED: dnaJ homolog subfamily C member 2-like [Cucumis sativus]
           gi|449510794|ref|XP_004163760.1| PREDICTED: dnaJ homolog
           subfamily C member 2-like [Cucumis sativus]
          Length = 309

 Score =  169 bits (427), Expect = 2e-39
 Identities = 91/161 (56%), Positives = 107/161 (66%), Gaps = 1/161 (0%)
 Frame = -2

Query: 729 RNGGGGSSFLVFEEKEWTDGDFDMLKKQIGKYPIGTVRRWEMIAQVFKGRHGVESVIKMG 550
           R+   G  F + EE EW D +   LKKQ+ K+P+G  RRWE+IA+ F GRH VE+VIKM 
Sbjct: 149 RSSKNGVDFAI-EEAEWDDAELGFLKKQLAKHPVGKPRRWEIIAEAFGGRHKVENVIKMA 207

Query: 549 KSWNEKKPGGGDSFTQFLKQRKPLDKRM-XXXXXXXXXXXXXXXXXXXDIALLNALKAFP 373
           K   EKK G  DS+ QFLK RKP+DKR+                    DIALLNALKAFP
Sbjct: 208 KEMGEKKLGDEDSYAQFLKNRKPMDKRIENVNEEATTAAVAGGWSSGEDIALLNALKAFP 267

Query: 372 KDVSMRWEKIAAAVPSKTKASCVKRVAELKKGFRSSKASVE 250
           KD +MRWEKIAAAVP KTKA+C+KRV ELKK FR+SKA  E
Sbjct: 268 KDSAMRWEKIAAAVPGKTKAACMKRVGELKKDFRNSKAGNE 308


>emb|CBI35235.3| unnamed protein product [Vitis vinifera]
          Length = 255

 Score =  166 bits (419), Expect = 1e-38
 Identities = 82/144 (56%), Positives = 102/144 (70%)
 Frame = -2

Query: 693 EEKEWTDGDFDMLKKQIGKYPIGTVRRWEMIAQVFKGRHGVESVIKMGKSWNEKKPGGGD 514
           EE++W DGD ++LKKQ+ K+P+G   RWE +A+ F+GRHGVESVI+  KS  EKK    D
Sbjct: 46  EERDWVDGDVEILKKQLLKHPVGMPGRWEAVAEAFQGRHGVESVIRKAKSLGEKKLSDSD 105

Query: 513 SFTQFLKQRKPLDKRMXXXXXXXXXXXXXXXXXXXDIALLNALKAFPKDVSMRWEKIAAA 334
           SF +FLK RKP+DKR+                   DIALLNALKAFPKDV MRWEKIAAA
Sbjct: 106 SFNRFLKDRKPVDKRVEDAMAMENGEKKEGWSSGEDIALLNALKAFPKDVPMRWEKIAAA 165

Query: 333 VPSKTKASCVKRVAELKKGFRSSK 262
           VP ++KA+C+KR +ELKK FR+ K
Sbjct: 166 VPGRSKAACMKRFSELKKDFRNPK 189


>ref|XP_002528771.1| DNA binding protein, putative [Ricinus communis]
           gi|223531774|gb|EEF33593.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 315

 Score =  164 bits (414), Expect = 5e-38
 Identities = 87/155 (56%), Positives = 104/155 (67%), Gaps = 8/155 (5%)
 Frame = -2

Query: 690 EKEWTDGDFDMLKKQIGKYPIGTVRRWEMIAQVFKGRHGVESVIKMGKSWNEKKPGGGDS 511
           EKEW + D ++LKKQ+ K P+G  RRWE+IA+ FKGRH VESVIKM K   E+K    DS
Sbjct: 160 EKEWNEEDLEILKKQMVKNPVGKPRRWEVIAEAFKGRHKVESVIKMAKEMGERKLDDNDS 219

Query: 510 FTQFLKQRKPLDKRM--------XXXXXXXXXXXXXXXXXXXDIALLNALKAFPKDVSMR 355
           + +FLK RKPLD R                            DIALLNALKAFPKD+ MR
Sbjct: 220 YARFLKNRKPLDTRAQAEISGIESGAEARKDNDGGVGWNAVEDIALLNALKAFPKDIPMR 279

Query: 354 WEKIAAAVPSKTKASCVKRVAELKKGFRSSKASVE 250
           WEKIAAAVP+K+KA+C+KR+AELKK FRSSKA+ E
Sbjct: 280 WEKIAAAVPTKSKAACMKRIAELKKDFRSSKAAAE 314


>gb|AFK36125.1| unknown [Medicago truncatula]
          Length = 303

 Score =  163 bits (412), Expect = 9e-38
 Identities = 94/181 (51%), Positives = 113/181 (62%), Gaps = 12/181 (6%)
 Frame = -2

Query: 756 NVVAVVLPW-------RNGGGGSSFL---VFEEKEWTDGDFDMLKKQIGKYPIGTVRRWE 607
           +V AVV P        RNG G    L   V EEKEW + D ++LKKQ+ K P G   RWE
Sbjct: 122 DVTAVVAPAPVVSLKNRNGNGNGVALAAVVEEEKEWNEDDIEILKKQMVKNPPGKPGRWE 181

Query: 606 MIAQVFKGRHGVESVIKMGKSWNEKKPGGGDSFTQFLKQRKPLDKRMXXXXXXXXXXXXX 427
            IA+ F GRH  ESV+K  K   EKK    DS+ QFLK+RK LDKR+             
Sbjct: 182 AIAEAFGGRHKAESVVKKSKELGEKKVDDSDSYEQFLKKRKALDKRLVEERGDLATVEKV 241

Query: 426 XXXXXXD--IALLNALKAFPKDVSMRWEKIAAAVPSKTKASCVKRVAELKKGFRSSKASV 253
                 +  IALLNALKAFPKDV+MRWEK+AAAVP K+KA+C+KR+AELKKGFR+SK+  
Sbjct: 242 ESVWSSNEDIALLNALKAFPKDVAMRWEKVAAAVPGKSKAACMKRIAELKKGFRTSKSGS 301

Query: 252 E 250
           E
Sbjct: 302 E 302


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